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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR040169
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 9 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.313s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi3g1v0059200.1
n.a. SURP and G-patch domain-containing protein 1-like protein; TAIR: AT3G52120.4 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein; Swiss-Prot: sp|Q94C11|SUGP1_ARATH SURP and G-patch domain-containing protein 1-like protein; TrEMBL-Plants: tr|A0A1J7GF04|A0A1J7GF04_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0059200 LjG1.1_chr3 6218684 6228301 -
2 domain predictions
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LotjaGi3g1v0059200.2
n.a. G-patch domain-containing protein; TAIR: AT3G52120.1 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein; Swiss-Prot: sp|Q94C11|SUGP1_ARATH SURP and G-patch domain-containing protein 1-like protein; TrEMBL-Plants: tr|V7BWV7|V7BWV7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0059200 LjG1.1_chr3 6218684 6228301 -
2 domain predictions
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LotjaGi3g1v0059200.3
n.a. G-patch domain-containing protein; TAIR: AT3G52120.1 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein; Swiss-Prot: sp|Q94C11|SUGP1_ARATH SURP and G-patch domain-containing protein 1-like protein; TrEMBL-Plants: tr|V7BWV7|V7BWV7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0059200 LjG1.1_chr3 6219332 6228102 -
2 domain predictions
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LotjaGi3g1v0059200.4
n.a. SURP and G-patch domain-containing protein 1-like protein; TAIR: AT3G52120.4 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein; Swiss-Prot: sp|Q94C11|SUGP1_ARATH SURP and G-patch domain-containing protein 1-like protein; TrEMBL-Plants: tr|A0A1J7GF04|A0A1J7GF04_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0059200 LjG1.1_chr3 6219332 6228102 -
2 domain predictions
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LotjaGi3g1v0059200.5
n.a. G-patch domain-containing protein; TAIR: AT3G52120.1 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein; Swiss-Prot: sp|Q94C11|SUGP1_ARATH SURP and G-patch domain-containing protein 1-like protein; TrEMBL-Plants: tr|V7BWV7|V7BWV7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0059200 LjG1.1_chr3 6219425 6227996 -
2 domain predictions
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LotjaGi3g1v0059200.6
n.a. SURP and G-patch domain-containing protein 1-like protein; TAIR: AT3G52120.4 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein; Swiss-Prot: sp|Q94C11|SUGP1_ARATH SURP and G-patch domain-containing protein 1-like protein; TrEMBL-Plants: tr|A0A072TPC5|A0A072TPC5_MEDTR Suppressor-of-white-APricot splicing regulator, putative; Found in the gene: LotjaGi3g1v0059200 LjG1.1_chr3 6219887 6226947 -
2 domain predictions
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LotjaGi3g1v0059200.7
n.a. SURP and G-patch domain-containing protein 1-like protein; TAIR: AT3G52120.4 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein; Swiss-Prot: sp|Q94C11|SUGP1_ARATH SURP and G-patch domain-containing protein 1-like protein; TrEMBL-Plants: tr|A0A0R0G6V7|A0A0R0G6V7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0059200 LjG1.1_chr3 6219887 6226947 -
2 domain predictions
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LotjaGi3g1v0124100.1
n.a. G-patch domain-containing protein; TAIR: AT3G52120.1 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein; Swiss-Prot: sp|Q94C11|SUGP1_ARATH SURP and G-patch domain-containing protein 1-like protein; TrEMBL-Plants: tr|A0A0S3SJH4|A0A0S3SJH4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0124100 LjG1.1_chr3 15156214 15164068 +
2 domain predictions
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LotjaGi3g1v0124100.2
n.a. G-patch domain-containing protein; TAIR: AT3G52120.1 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein; Swiss-Prot: sp|Q94C11|SUGP1_ARATH SURP and G-patch domain-containing protein 1-like protein; TrEMBL-Plants: tr|A0A0S3SJH4|A0A0S3SJH4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0124100 LjG1.1_chr3 15156376 15163693 +
2 domain predictions
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