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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0061400 |
| Transcript ID | LotjaGi3g1v0061400.4 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Carotenoid cleavage dioxygenase; TAIR: AT3G63520.1 carotenoid cleavage dioxygenase 1; Swiss-Prot: sp|Q8LP17|CCD1_PEA Carotenoid 9,10(9',10')-cleavage dioxygenase 1; TrEMBL-Plants: tr|B5BLW2|B5BLW2_MEDTR Carotenoid cleavage dioxygenase; Found in the gene: LotjaGi3g1v0061400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:6496787..6502774) extracted from Lotus japonicus Gifu genome v1.2.
AACACCACTGGTACTGGTGCTGGAGGGTTGCCAGTGAAGGTGGAACCAAAACCCAGTAATGGTTTCACTTCAAAAGTGAT TGATTTGTTGGAGAAGCTGGTTGTGAAATGCTTTTATGATTCTTCACTGCCCCATCATTGGCTTGCTGGTAATTTTGCTC CGGTTCATGATGAGACTCCTCCTACTAAGAATCTTCCTGTCAGAGGGTTCCTACCGGTTGGTACCATTGCCTGTTAGATA CCCATTTTAGGATATCTGATAATGTGTTATATTTCTCAATTGGAATATTTTGCTGTAACATACCTTGTTATTAGACCCCT TGTTCATCACTTACTATTTGAAGTGTATTGTAGGATTGCTTCAATGGAGAGTTTGTCAGGGTGGGACCTAATCCGAAGTT TGCTCCTGTGGCTGGATATCACTGGTAAAAAATGATTCTTTTGTTGCTAAAAAATATTTGGTGGAAAATATATCTTAGTG ATCCATATTACTTATCAGATTATTGGTTTTCTTTTGTCATATTAACACTTTTATGTGAAGGTTTGGTATTAACATGGAGC AGTTTTTGTTTATCTGAATTAAAAAAAAATGTGTTCTTAGTATGGAGTTTTATGCTTATGCCGTGCTTTCCCTATCTGTT TTTGCAGGTTTGATGGAGATGGGTGTGTGATTCTCTTCCATTCTTTAAAAATATATTTCTTTCATATTTCCTGCATTGTG CATCTTGACTATCCATTTTTTTTGACATGTGTAATATGTGAGCACAAGTCTAACATAATGATAATGGCTTAGTGATCACA GTTTAATACATAAGTTTGAGCCCCTGTTCTGTTGGAACTGCACAGCCAGATCATATCATATAGGATGTAAATATTTGTTT TCTTTTGAATACCTTTTGAGGTTTCCCCATTCCTTTTTCCTTGCCTCTTCGCCTAATAGCCTAAGCTTTTGAGAGAGTTG GTTCATGATAATATGGTATCAAATCTTATACGACAAAGTGATTTTCAGTTCTTTCCACTTATGTTCTTCTAATAAAAAGG TAAATTTCAGCACAAGATTTGTGGGCTACAGGCCTAGTACATTTTTCAAGCTTTAAACCCTCAAGCCTCTTCTGTGAGGG GTGTGTTGAGGATGTATCATTAAAAACCATCCATGTGTCTTTATCAAATAGCTTAAGCTTTTAAGAGAGTTAGTTCATGA CAAAGTGCTAGCAACACTCACTTTAACACTCTTTCCAACAATGTGTCATTGATTGGTTGAAATTCATGTGGAGTCTACTA AAAATATGGATCCCACTTTCAATTTAGTGGGACTCATAGAAAATTAAGTGTGCCCACACTCAAGTTAACCAACCACTACT TATTATATCTGTATTATGTTTTGAAATCGTAGTTCAGTAGAGCGCATGTTTTGAAATGATTTTGAGTTTAACATTTCAAA TCCTCAAACTGATTATGCCTAATCTTTTCTCGTCTGAATTTTATATATGCATGATTATGACATTGTTAAATTTAGTTTAA CTTACTAATGATATATCCTTCAGAAGTTTCTCAGGGCTTGTTATATTAATTAATAGGTTAGTGCTGGGTGATAGGGGAGG ATCACATGAAAGTATCAAGGAGGATTGGAAAATTAGCATTAGAGACAACTGTGTAACCTCCTGCCCATGTGGCAGGATGA GAGGGAAATCATGAAGGGGATCAGTTAAGTGGATAAGAGCGGAAATGGAGGAATAAAAAGAAGGAAGAGATAGAAGAGAG AATCAGGAAAGAAGTGAGTTAGGAAGGTGGGAGAGAACCTGGCATTTCGAATAACCTGGGCTGTTCGTATTATTTTGTTG AAAGAGAATTCATCTCAGTTAATGTACACATCTATCTCTGCTTTTAATATCAAGCTGAGAGCAGTGGTTGATTTATAGTA AATAATGTGTTTTTGGTCATTCTGCTCTAATTCGGTTTCAATCCTTATATTTTTACTCCATGTCTGTTGTAGTACTTATT TTTTCAATTTGTTCATTCTAATCTCTCACTGTACTTAATGTATCCTATTTGTCCTTATGTTAAGTAATCCTTCATTCAAG TTATGTTAATAAATGATATAAAATGGTTTTTTAAAGTAGTAGTTTAGATAGGAATAGGAAAGAATTTTGTATGCAACACG TTGTTCACTTAATATATAGTGAAAATATAGGTCTAAAATCTTAATAAAGCCTACATAATATGGTATTTCTGATAAAGAGT CTGCTGTACAGATGCCGGTTCACTTTAATTTTTTTCCTGAATTATACACCAGTTCCAATTATGCTTCACTAACACTTTTG AATTTCAGCAGCTCATCATAGTGGAAATAATAATGTTCTTAAATTTTGGGTGGTCAATAACATTCATAAAAAGTTCATAG TTTTGTTGTCTGGTCCTCTAATATGGTTAATTGCAGAATGATTCATGGTTTGCGAATCAAAGATGGAAAAGCCTCATATG TTTCTCGTTTTGTGAGAACTTCTCGTCTTAAACAAGAAGAATACTTTGGAGGCTCTAAATTTATGAAGGTAGGAACAGAA AGTGAAAATATATAAGCTTAGTGAAGAATTTATTACTCTTAGAACTTTTAGGTTCCCAAGACAAGTGTAACTTCTTGGAT CTCATTTTCAGATTGGAGATCTCAAGGGTCTATTTGGACTGCTAATGGTTAACATGCAAATGTTGAGAACTAAATTGAAA GTACTGGATGGTTCATATGGACATGGAACAGGTAACTCATGTTAACTCGTTTTGGTGAAGTCTTCGTGTGGTTATTTACT GGGACTATTATGCTATTGTATGTGACTGGAATAGCTGAAACTAACTTCTGCTCATACTCTCATGTCTATCAGCTAATACA GCTCTTGTTTATCACCATGGGAAGCTTCTAGCACTCTCGGAAGGAGATAAACCTTGTGAGTATTGTTCCTATTTCACTTT TATGAAAGATGTAAACTTGTTGATTATATCTGAATGCCATAAACTGAATAGAACAAAGGGGTTAAAATAGATTCATATGG TTCAGGGGTGTCCGTCAGCCATTATGATCTTGAGCATCAGTGGTTTTTTCATTTCTCATTTTGAAGTAGTCTCATTTTGA ATTTTGCAGATGCTATTAAAGTTTTTGAAGATGGTGATTTGCAGACACTTGGCCTGCTAGATTATGACAAGAGATTGGAC CATTCCTTCACTGCTCATCCAAAAGTTGACCCATTTTCTGGTGAAGCCATCTTCAATAAATAGTGAAAAGTTGACTTATT TAATGTAATTATTTATTCCAACAAACAAATATCCTGTATGCAGGGGAGATGTTTACATTTGGTTATTCACATACACCGCC ATATGTCACATACAGAGTAATTTCAAAGGATGGTTTTATGCATGACCCTGTACCTATAACAGTATCAGACCCCATCATGA TGCATGATTTTGCCATCACAGAGAACTACGCCATCTTTATGGATCTTCCTCTGTACTTTAGACCAAAGGTATTGCAGGTG TTTCTGTTAATGTAATCTTACAAAAGAGTAATTTCTTTATCATATCATTCAACTATACCAAGCTTGGTGTTAAAATGATC TTGTTTATTATGAGTAAAAATAATGCTTTGCTTTTATACTTGTTAGAAGTTAAAAACAAAATCCTAATCCTGTCCTGCAC CTAATAGTTCAATTTTTTGGATATTCTTAATATCATATCAGAGCCACCGTACCCTAACCAAGTGAATAGAATATCAATAT TCTTCCCAATTCATAATTAAATGTGGCTCTATATTTTTTAAGGTTTTTAAGGGGGGGACATTTTATAGATAAACGCCAAG TCTGGGTTTGGATTTACTAGCTTCAGGTTTTGAGATTGTAGGTTCTTGATGCTACTTTCTTCCTTGTAGTGAAATATTTT TAAATGAAATGTTCATAATGTGAATTGTTACAGTGAATGTGGGCATGGACAATATGATTTCATTTTCAAATGGGATAGGG TTAATTTAAGGATGGTTTAATGGTATACAGTCCGTTGACTTCATGCATCAGTTGATGGGAACTAATGATCTAAGTTGTTG AATGAAATCCATATTTCAGGAAATGGTGAAAAATAAAACACTGATATTCTCCTTTGATTCAACCAAGAAAGCTCGCTTTG GTGTCCTACCTCGGTATGCTAAGGATGATAAGCAAATTAGATGGTTTGAGCTACCAAACTGCTTCATATTCCACAATGGT GTGTTTGTTTGCTATTTTTTTCTCCTTCATAAATTGTTTATTAATATTCTGCAATGATCTCGTAAAGATTCTGTGATTCA TAAAATTGAAGTGCATGATAACATAATTTGAGTGCAGTCCAGTATATTTACCCAGCCAACTTATAAAAATAGTCTTTCTT TTTATAAATCATAGTAATGCCAAAGTTAGATAGGAACAATGTATTACGGATAAAAGTAAGAACACAGATTCAAGCTTCAA TCTGTGCCTTAAGCTCTTCAAACAGAAATGTCCATTGAAACTTTTATATGACCTTTTTTCTTCTGTTTTTCATTTAGCCA ATGCTTGGGAGGAGGAGGATGAAGTTGTTTTGATCACATGTCGCCTTGAGAATCCAGAGTTGGACAATGTTGGCGGGGCT GTCAAGGAAAAGCTCGAAAGTTTCTCAAATGAGCTGTAAACCGATTCATTCTAATATGTAAATTACGAAGCAAATTTTAC TAGATGGTCGTTATTTATTTATGGATATTGAACTTTTTACAGGTATGAAATGAGGTTTAACATGAAAACGGGTGAAGCTT CTCAACAGAAACTATCAGCATCTACAGTAGATTTTCCTAGGGTGAATGAAAGCTACACTGGCAGGTAAGTTTATTCTCTC CATGCTGAGAAAATTCAGGGTAGTTTGAAAATGAAACCCGTAAATCATCCTATCTTAATCATATGTAAATTCGATAGTTG TTATTTTCGTAGTCGCATTAATTTTTTTGTGTACTTATTTGAAAATGAATGACAGTTCTAGTGTGTGTGCTTTCCAAATT AAGTTTAAGATTGAGTCCGAACAGTAGTTAAGTTTATGCTTGTTTTCCATATCCTGCATTTACCATTCGTATTTCATCAG GAAACAGCGATATGTATATGGAACTATATTAGACAGCATTGCAAAAGTTACCGGGGTTGTTAAATTTGATTTGCATGCCA AACCGGATTCTGGAAAAACAAAGCTTGAAGTTGGAGGAAATGTTCAGGGTCTCTATGACTTGGGACCAGGGAAGTTTGGA TCTGAGGCTGTTTATGTCCCACGTGTCCCTGGCACCGATTCTGAAGAAGATGATGGATACTTGATCCTATTTGCACATGA TGAGAATACCGGGTATCATTTTCCTCTGCACTTTTCATGCAGTGGCTTTTGCGAAATTGTTTATATACGCATGGATTATA ATCATAATTATGACTGTTATGAACTTATGAGTTATGATCAGTGTAATTCCTTAGGAATCAGAAACAGCTGTGTATGGAAT ATGGATCACTATGACATGACCTATTTTTAGTTTTTTTATCTCCTTTTTAATAGTATAAAATCTAACATGATTCTAAATAA TAAAACTGCAGCAAATCATTCGTGCATGTCATCGATGCAAAAACAATGTCAGCAGATCCTATTGCAGTTGTAGAATTGCC GCATAGAGTTCCATATGGTTTCCACGCCTTCTTTGTGACAGAGGTTTGTGTGACTTCATATTGATTATTTCTACATTGAA TTTCATTATCTCACTCACATTACTCGGAATGTTTACTTTGTAACTGCTTTTGGGGGTATGAGTACATTTGACTTGAGTGC CTAAGTTTCATCTAGTATGAACTAATTTATAGAAAGATAAAACTAAATATAGCTCTAAGTTATTAACTTAGCACAGTTTA TCATCCTTGTTTATATTTAGTTTTTTTATGTTACTTATCAAAGAAGTTCTAAGCAATTGCTCATATAG
CDS sequence (LotjaGi3g1v0061400.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTCATGGTTTGCGAATCAAAGATGGAAAAGCCTCATATGTTTCTCGTTTTGTGAGAACTTCTCGTCTTAAACAAGA AGAATACTTTGGAGGCTCTAAATTTATGAAGATTGGAGATCTCAAGGGTCTATTTGGACTGCTAATGGTTAACATGCAAA TGTTGAGAACTAAATTGAAAGTACTGGATGGTTCATATGGACATGGAACAGCTAATACAGCTCTTGTTTATCACCATGGG AAGCTTCTAGCACTCTCGGAAGGAGATAAACCTTATGCTATTAAAGTTTTTGAAGATGGTGATTTGCAGACACTTGGCCT GCTAGATTATGACAAGAGATTGGACCATTCCTTCACTGCTCATCCAAAAGTTGACCCATTTTCTGGGGAGATGTTTACAT TTGGTTATTCACATACACCGCCATATGTCACATACAGAGTAATTTCAAAGGATGGTTTTATGCATGACCCTGTACCTATA ACAGTATCAGACCCCATCATGATGCATGATTTTGCCATCACAGAGAACTACGCCATCTTTATGGATCTTCCTCTGTACTT TAGACCAAAGGAAATGGTGAAAAATAAAACACTGATATTCTCCTTTGATTCAACCAAGAAAGCTCGCTTTGGTGTCCTAC CTCGGTATGCTAAGGATGATAAGCAAATTAGATGGTTTGAGCTACCAAACTGCTTCATATTCCACAATGCCAATGCTTGG GAGGAGGAGGATGAAGTTGTTTTGATCACATGTCGCCTTGAGAATCCAGAGTTGGACAATGTTGGCGGGGCTGTCAAGGA AAAGCTCGAAAGTTTCTCAAATGAGCTGTATGAAATGAGGTTTAACATGAAAACGGGTGAAGCTTCTCAACAGAAACTAT CAGCATCTACAGTAGATTTTCCTAGGGTGAATGAAAGCTACACTGGCAGGAAACAGCGATATGTATATGGAACTATATTA GACAGCATTGCAAAAGTTACCGGGGTTGTTAAATTTGATTTGCATGCCAAACCGGATTCTGGAAAAACAAAGCTTGAAGT TGGAGGAAATGTTCAGGGTCTCTATGACTTGGGACCAGGGAAGTTTGGATCTGAGGCTGTTTATGTCCCACGTGTCCCTG GCACCGATTCTGAAGAAGATGATGGATACTTGATCCTATTTGCACATGATGAGAATACCGGCAAATCATTCGTGCATGTC ATCGATGCAAAAACAATGTCAGCAGATCCTATTGCAGTTGTAGAATTGCCGCATAGAGTTCCATATGGTTTCCACGCCTT CTTTGTGACAGAGAAGTTCTAA
Protein sequence (LotjaGi3g1v0061400.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIHGLRIKDGKASYVSRFVRTSRLKQEEYFGGSKFMKIGDLKGLFGLLMVNMQMLRTKLKVLDGSYGHGTANTALVYHHG KLLALSEGDKPYAIKVFEDGDLQTLGLLDYDKRLDHSFTAHPKVDPFSGEMFTFGYSHTPPYVTYRVISKDGFMHDPVPI TVSDPIMMHDFAITENYAIFMDLPLYFRPKEMVKNKTLIFSFDSTKKARFGVLPRYAKDDKQIRWFELPNCFIFHNANAW EEEDEVVLITCRLENPELDNVGGAVKEKLESFSNELYEMRFNMKTGEASQQKLSASTVDFPRVNESYTGRKQRYVYGTIL DSIAKVTGVVKFDLHAKPDSGKTKLEVGGNVQGLYDLGPGKFGSEAVYVPRVPGTDSEEDDGYLILFAHDENTGKSFVHV IDAKTMSADPIAVVELPHRVPYGFHAFFVTEKF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 432 | 432 | 8.5E-251 | – | |
| PANTHER | 1 | 432 | 432 | 8.5E-251 | ||
| Pfam | 1 | 429 | 429 | 3.4E-107 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi3g1v0061400.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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