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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0062900 |
| Transcript ID | LotjaGi3g1v0062900.1 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Annexin; TAIR: AT5G12380.1 annexin 8; Swiss-Prot: sp|P51074|ANX4_FRAAN Annexin-like protein RJ4; TrEMBL-Plants: tr|I3S6J0|I3S6J0_LOTJA Annexin; Found in the gene: LotjaGi3g1v0062900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:6641317..6643712) extracted from Lotus japonicus Gifu genome v1.2.
AGCATCTCTCATTTCATAGCAATTAAAGGAAAAATATAGCTACCTTTCTTCTATTTCCTACTGAAATGAAGTTCCAAATT ATTGATAGTGACTCTAGAAGATTTTAACATTGCTCTAAACAAACTTGGACACCATAAAAGCATAGTTCATAGCTGTACAG CTGTATCTGTAATTAAAGATCTGATTAAAAGGTCCAAATTGGGAGTGGCCAATTCTTATTTTGAATTTTTGATCATTGAA CTTTTTATAGAAGATTTTGGCATTGCTCTAAGAAAACTGCATCATTAAAAGACAAGGACACAAAAGCATAGCTCATAGCT GTCTAGGTTACATTATATGTTGAAGAGCTAGGAAACTATACTCAAACATAACCAAAACTTGAAAAAATAGGAAGATATAA TCAAATATGGCCACACTTATTGCTACCACTCAGCATTCACCTGTTGCAGATGCAGAAGCTCTTCGAAATGCTTTTCAAGG TTACACCATTTCTTAATTGAAAAAAAAAAAAATTACATTGGTTGGTTGATTGGTCGAGGTTATGATTTTTCTGCCATATT GGAAATACATCAAGAACATTGACTAAGTGACTTGATCAATATGATGCATCTTTTGATAAAGTAAAATGTGATATAGTACT AATTGAAATTTAATGGTTTTGCACTTTCTGCAGGATGGGGGACTGATGAGAAGACTGTGATAGCAATATTGGGTCATAGA AGTGTTCATCAGAGGCAGCAAATCAGAAAGGCTTATGAGGAGCTTTACCAAGAGGATATCATCAAACGCCTCGAGTCGGA GCTCTCTGGTGACATTGAGGTACTATTATAGAACACGATTTTGCCAACAATGTCATATAGTTTTATCTTACCCTCCTGAG CCATTGATTTTGAATAATGGTGTCTAAACAAAACAACAGAAAGCTGTGTATCGCTGGATGCTGGAACCTACCGATCGCGA TGCTGTTCTAGCCAATGTGGCCATCAAGAGTGGCGGCAAAGGGTACAATGTGATTGTGGAAATTGCTACTGTCCTTTCAC CTGAAGAGGTCTTGGCTGTTAGGCGCGCCTATCACAACCGCTACAAGCGTTCCTTAGAAGAAGATGTAGCTGCTCACACC ACCGGTGATCTTCGCCAGGCAAGTCACTCAATCATATGAGCTTGTTTGATTCTCTTCTCAGTTTTCTGAATTTTAGAACT ATTTATACTTATGTTCTGAATCTGTGCTTGGTTTTGAATTTTGGCAGCTATTGGTTGGGTTGGTGAGCTCATTTAGGTAT GGAGGAGATGAGATCAATGCAAGATTGGCAAAAACTGAAGCTGATATTCTTCATGAATCTATCAAGCAGAAAAAGGGCAA CAATGAAGAAGCCATCAGGATCCTTACCACAAGGAGCAAGACCCAACTTGTGGCCACTTTCAACCGCTACAGAGATGACC ATGGCATTTCCATAACTAAGGTACTACAAAAGAAAAAAAGTTCATCACTCTTTTCCTCTTTCTTTTCTTTTTGCCTCCAT TTTCCTTAAAGTTCTTAGTATGTTACAAATTTTTCTGTCATGTTCAATTACAGAAATTGTTGGACAATGCATCTGATGAC TTCCATAAGGCATTGCATACGGCTATTCGCTGCATCAATGACCACCAGAAGTACTATGAAAAGGTCAGATTCTAACTAAA CCTATATCTGCAAGAGCAGTGACAGATCCATAAACTTTAAGTTACAATAACACCAAATTAGCTTACATGCTTAACAAATG ATAGAATTACTAGTATCATGTACTATACAATGATTTAGCATTGAATTTTTTGAGCATTATGTGTAGGTTCTGCGCAATGC ACTGAAAAGGGTTGGAAGTGATGAGGATGGACTGACCCGCGTGGTGGTGACAAGGGCTGAGAAGGACCTGAAGGAAATCA AAGAGCTGTACTATAAGAGGAACAGTGTTCATCTTGAGGATGCAGTGGCCAAGGAACTCTCAGGGGACTACAAGAAGTTC ATCCTCACCTTGTTGGGGAAGCAAGATTGAAGTAATTAATTGGTCTTGCTAAGGGAAAGTCTTGTCATGGATTCTGGTTA TGTTGGTTTCTTGTAGATTGGTCTGGTTAATTTCCCTATTTAGAGTGTGTTTTCATGAGTCCTGTCTTGTTTATCATCTG TTTTGTGAGACTATATAAACTTCTGTCTTAATTAATGACTATATTTGATGTTTAATTTTGTGTTTATAACCATTATGTCT GATCCAGGGGTTGATCGTCTCATCTTTTAATGAGTTATTTAACCCAAATTTTCTTATGGGTCATTTAGACAACCCCTTAA CAATGAGGTCAGGGGTTCAATGATCACCCATTGAAATGAAACACAGTTCGTAGTCAGCGGTTTGCCTAGTGCGAAC
CDS sequence (LotjaGi3g1v0062900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCACACTTATTGCTACCACTCAGCATTCACCTGTTGCAGATGCAGAAGCTCTTCGAAATGCTTTTCAAGGATGGGG GACTGATGAGAAGACTGTGATAGCAATATTGGGTCATAGAAGTGTTCATCAGAGGCAGCAAATCAGAAAGGCTTATGAGG AGCTTTACCAAGAGGATATCATCAAACGCCTCGAGTCGGAGCTCTCTGGTGACATTGAGAAAGCTGTGTATCGCTGGATG CTGGAACCTACCGATCGCGATGCTGTTCTAGCCAATGTGGCCATCAAGAGTGGCGGCAAAGGGTACAATGTGATTGTGGA AATTGCTACTGTCCTTTCACCTGAAGAGGTCTTGGCTGTTAGGCGCGCCTATCACAACCGCTACAAGCGTTCCTTAGAAG AAGATGTAGCTGCTCACACCACCGGTGATCTTCGCCAGCTATTGGTTGGGTTGGTGAGCTCATTTAGGTATGGAGGAGAT GAGATCAATGCAAGATTGGCAAAAACTGAAGCTGATATTCTTCATGAATCTATCAAGCAGAAAAAGGGCAACAATGAAGA AGCCATCAGGATCCTTACCACAAGGAGCAAGACCCAACTTGTGGCCACTTTCAACCGCTACAGAGATGACCATGGCATTT CCATAACTAAGAAATTGTTGGACAATGCATCTGATGACTTCCATAAGGCATTGCATACGGCTATTCGCTGCATCAATGAC CACCAGAAGTACTATGAAAAGGTTCTGCGCAATGCACTGAAAAGGGTTGGAAGTGATGAGGATGGACTGACCCGCGTGGT GGTGACAAGGGCTGAGAAGGACCTGAAGGAAATCAAAGAGCTGTACTATAAGAGGAACAGTGTTCATCTTGAGGATGCAG TGGCCAAGGAACTCTCAGGGGACTACAAGAAGTTCATCCTCACCTTGTTGGGGAAGCAAGATTGA
Protein sequence (LotjaGi3g1v0062900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATLIATTQHSPVADAEALRNAFQGWGTDEKTVIAILGHRSVHQRQQIRKAYEELYQEDIIKRLESELSGDIEKAVYRWM LEPTDRDAVLANVAIKSGGKGYNVIVEIATVLSPEEVLAVRRAYHNRYKRSLEEDVAAHTTGDLRQLLVGLVSSFRYGGD EINARLAKTEADILHESIKQKKGNNEEAIRILTTRSKTQLVATFNRYRDDHGISITKKLLDNASDDFHKALHTAIRCIND HQKYYEKVLRNALKRVGSDEDGLTRVVVTRAEKDLKEIKELYYKRNSVHLEDAVAKELSGDYKKFILTLLGKQD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 314 | 314 | 1.1E-179 | – | |
| PANTHER | 1 | 314 | 314 | 1.1E-179 | – | |
| Gene3D | 2 | 81 | 80 | 5.5E-25 | ||
| SUPERFAMILY | 3 | 312 | 310 | 5.37E-102 | ||
| ProSiteProfiles | 10 | 81 | 72 | 25.446 | – | |
| Pfam | 15 | 76 | 62 | 4.6E-22 | ||
| PRINTS | 24 | 46 | 23 | 3.0E-22 | ||
| SMART | 27 | 79 | 53 | 4.8E-20 | ||
| PRINTS | 64 | 80 | 17 | 3.0E-22 | ||
| ProSiteProfiles | 82 | 153 | 72 | 16.522 | – | |
| Gene3D | 82 | 153 | 72 | 3.5E-17 | ||
| Pfam | 87 | 151 | 65 | 1.6E-10 | ||
| PRINTS | 91 | 112 | 22 | 3.0E-22 | ||
| SMART | 99 | 151 | 53 | 1.2E-12 | ||
| PRINTS | 118 | 132 | 15 | 1.6E-15 | ||
| PRINTS | 160 | 180 | 21 | 1.6E-15 | ||
| Gene3D | 164 | 239 | 76 | 7.6E-17 | ||
| ProSiteProfiles | 165 | 236 | 72 | 17.987 | – | |
| Pfam | 170 | 232 | 63 | 1.5E-11 | ||
| SMART | 183 | 234 | 52 | 0.19 | ||
| PRINTS | 225 | 243 | 19 | 1.6E-15 | ||
| ProSiteProfiles | 240 | 311 | 72 | 20.931 | – | |
| Gene3D | 242 | 312 | 71 | 5.9E-24 | ||
| Pfam | 247 | 309 | 63 | 7.7E-15 | ||
| PRINTS | 253 | 273 | 21 | 3.0E-22 | ||
| SMART | 257 | 309 | 53 | 5.1E-16 | ||
| ProSitePatterns | 257 | 309 | 53 | - | ||
| PRINTS | 297 | 310 | 14 | 3.0E-22 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Molecular function | Calcium-dependent phospholipid binding | Interacting selectively and non-covalently with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium. |
Expression pattern of LotjaGi3g1v0062900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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