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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0065500 |
| Transcript ID | LotjaGi3g1v0065500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Peptidylprolyl isomerase; TAIR: AT3G60370.1 FKBP-like peptidyl-prolyl cis-trans isomerase family protein; Swiss-Prot: sp|Q0WRJ7|FK202_ARATH Peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic; TrEMBL-Plants: tr|I3SJZ8|I3SJZ8_LOTJA Peptidylprolyl isomerase; Found in the gene: LotjaGi3g1v0065500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:6934637..6940986) extracted from Lotus japonicus Gifu genome v1.2.
CGACCCCGAAAAGCTAACTTAGAAGTGAGAGTTACTCTGCTCTACCCTATATAAGAACTATCTTGATCATATCTTTAGTC AACGTGCAACATCTAACAACAATATGCACATGCAATCTCGGAAGTAAATGCTGAACAACCAATCATCATAAATTTTATCC ATATAGCTTCAATAATTTCCCCTTACACAAAAGCAAGGACAAGTAAATCTTACACTATAGGGGCTTCGTTCACTGCTCAC CACGTTGTTTGCTCTCCGATACCGCTCCACCGGAGAAGGGAGTAAGTGGGTTTGGGCGCCGGTGGAGAAAGAAAGAGGAA AGTGGTCAGGATTAGAGGAGGGACACTTGAGTCATTTCACTTTTTCAATCTTTGACATAAACTGATACAACGGATTTTCA CTCTTACTGGCTAACAGAGTGGAAGTGGATATCATAGAAGCAACACGAATATGGGAACTTCTCTCTGTAAGTCTCTCTAT CTCTCACTCACATTCACATGGGTTTTGATTGAATATGAGAACTTGTTTAGTTGTGGGGATATTAATATAGCTTTAACTTC ATGTTATGAAAACACAATTCTGGGTTTGGTCTATGCTTCAGTATCTTTGATGTCTTTGTTGTCATCTATCTTGGTTTTGT GTTTGTTGTTGATTTTAAAGTTCATATATTGTTCCTAAGTCCTTGAGATTTGCATGTGATAGGATGTTCATGTTTCCTTT ATCCAAGAGCTTAAGCTTTTGGATAATTGGTTTATTACATGATATCAGAGCCTCTATCGCCTAGTGGTGTAGAGTTTGAT CATTGTTGTCCTCATTATTCTAATAAAAGTTGAATTTAAGTCCATATGATATGTGGGTTTGTGCATAGTCCACACTACAA GTCTAAGTGGGCGGGCTCCTGCGTGAGAGGGTGTGTAGAAATATATTATAAAACTATCAAGTGTCCTTTACCCAGCAGCT TAAACTTTTGAGATAATATGTTATGACAGTTCGTTCCCCCACCCGGTTTTGCACTTCCTATCAAACTAGCTGGAAAATTA GGATGAAAAGTAAAATTCTAGATAAGTAAGCTAAGTCTTTCAACTACATGGAGTAGGCATTTGTTGCTGTAAGGTTAATG ATTTGGCAACAAATGAGAGAATGTGGAAGTTTGTTTCACTTTCAGGTACTTATTAACTAAAAAGCTTTAACTTTTTTGGC AGTGAACTTCCCATTTTCTGTACAAGGAACTATATTTTCTCAAAGGAAACAACTAACGCATCGATACACAAATCAGAAAT CAGAGGAGTATCCGTGAGTGACCTGTAGATTGACTTCTTTTGTGAAATTTCTCGAATGGATTGTCATTTAATTGTCTCCT GAGTTGCTTTTCTGTATGGACAGAGTTCAAGATAGCTGTATACTACATTCTGCGAGAGCATTGAGGAGGAAACTTTTGCT TTCTGTTTTGGTTTCAACTGGTGTTTTTCCAACTTTATCTTCATATGGGAAGACAAAGGGTATTAATCCGTTTAATGAAA AACGGTTGCTACAACAAAATAAGCAGATACAGAAAGCAAACTATGCGCCAGAAGACTTCCCAAATTTTATTAGAGAAGGT GATGCTTACCTATATGCTTTTAATGCTGTAATGTCTCACGTTATATCAGTTTTACATGCAAAAATGATTATCTTATTTTC TGAGCTCAATAAGAAAAAAAATCTATTATCTTTTACCCTGTATCTCTCATGCCAGTGTCACAGACTCACAGCTGTGTTTA ACTATTTAAATTTAGTGTGAAAAGTTTGGGAGCTTACTATGAAGTTTGTTTATTGTCAACCTATTGCATATGATGGTCTG ATTTATTGACATTCTTTTCAGGTTTTGAAGTTAAAGTAATATCATCAGAGAACTATATTAAGTGTGATTCAGGACTCATT TACCGAGATTTTGAAGTTGGTAAAGGTGATTGCCCAAAGGATGGTCAGCAGGTTTTTCTTTTTATTTTTCTTTCTAATCT GCTACTTCCTTCTTTGTAATTTATTTGTAATCATCCGGCGGAACACTTTGCAAAAATTTTAGGCAATGGGCATTGAAATG GGAACTAGAACTATACCTGTGTAGTTTTTTGCAACTGGCTACAACTCTATTACTAGACAATGGAAAGAAGTATATTTTTC TTTGGTATTAAAAGTTAAAACTTTTGCTATGTTAAGGAAAGCATTGACGCAATTATTTTCAAGGAATTTCTTTAGTTCCT TAAGATGGGGAAAATTGGGAATTGATGTTTGAGTGGTTTGATTGGAGAAGTAATATAATATTTCGAAATTTAGAGCAAGA TGCCAGAGATCTGTATTGTCTTGAAGACATCTCATCTTGGTTTGCTATGAAGTGCATGTTTGGAAACCCTTCTTCAATTG ATTCTGTAGGCAGAATCAATTTTGGCGTGGAGCTTTAGTGTGTAGCTTCGGAGTTTCAGAATTGATTCTGATGAAAGAGA AACGTCTTCAGAATCAATTTTGTGGTGGAGATTCCATGAGTAACTTCTAAGTTTCAGAATTGATTCTGATGAGAGAGAAG CGAATCAAAACATGCTAGATATATGTTTTTACCATGGGGGTCTTTCATTTTTACATCCACAGTCATGGTAAGACCTAAGA AACTCGGTTAGAAGTCTCTTATTGAGTAATTTCTTAGCTATAACAACCCAGGGGAAAGGAATATCCTATTTAGATGGTAG CTCCTTCATTTGCTGATGCGTGCCACCAAACAGTAGGTCCAGCTACGGTTCAATTTCATTGACAAGACAGGGCATTTTTT ATCACTCTAGGTACAAGAAAATTGTGTAGCAAGTTAGTCTGAATTTTCACTGTGGCTAGAGCATAGAAAGTCCTTGATGC TGCTAGTTATTCTCTAGCATTTTGTGTTAGGTTTTCTTTTATTCATTTTTTATTAATCCATCCTCGATTCTACTTCCTCC AAGGATTTTTGCAGGAATGTTTTGTATATCTGCATCCTTGGCATCTTCTTGTTGGTGAAATTAATAGATAATTATAGTCA ACTTTGCAAAACTGCAGCATTTAGGCACCAAGCACTACAATTCAAAACCTGACTTTAATAAACAAGTTATAATTTGCTTA TTATTTGATTTCGTGTCATGCCTTGCAGGTCACATTTCACTATACTGGTTATAACGAATCGGGCCGTCGTATTGACAGCA CTTATTTGCAGGGTTCTCCTGCCAAAATTCGCATGGGTACTAAGGCACTAGTTCCAGGTTAAAAAAATTATATTTAGTTA TCAGTTTCATTGCAGACTGTATGTAGGACAAAGAACATTCATCCTATGTTTGATTTTGTCTTTCCTTGAAAGAATTAAAA CGGGGAGGAAATTAGTGAAGGAAGTGAGAAGTATATTTTTTCTGATGTAGGGTTTGAGGAAGGAATTAAAGACATGAGAC CAGGTGGAAAGAGAAGAATCATTATTCCCCCTGAACTTGGACCACCGGTACATCTCTCATTTTCTTTCATCTCCTTCCTC TAACTTGTTTTGGAGTCTTTCCATGTTGTTTAATATTGACTGCTTGGAACTTAATGTATGCAAAGGTCATGAAATTTGCC TTGGTGTTTTATATACACAAAATTATCATTTCTTACAATTTACAGCACACGTAATATAACTCTGCACTTGTTGGGATCTA CTTAGGACATGATAGAACTGTTAAAAGTGAAGAAATAATCTCTTTACATACACCCAGTATGTCTGGTTGAATAAACAGCT CACATAAGGTGTATATTTATGTTGAAAATGATTACCTAATCACTTAAAACTTGTATTTGAATAATTTGATAGTTTGATGT GTTTTACATATGACTTAGAAGTACAATGCATAGATAAGTTTCCTAGTCTATCTCAACAATAAAATCAGAACATCATCTGC AAAACTAATCCTATCTAGAGATAATACTTATCATAACTAACCTTATCTTATCATAAAAAAACATATCTCATATCTCAACA CTTCCCCTCAAGCTGGAGGGTATAGATCATATGCATCCAGTTTGGAAAACATGTATGATATTTGCGGACCCATTGAGGAC TTAGTGAAGATATCAGCAAGCTGATCCTTGGACAAAATAGAGGAATAGGCATAACAGAGTTAAGTGAAAGGCAAGAACAT GTAGTGACATCTGCTGACATGTAGAATCGATGGTTAGCAGGTGGGGAGCATTGAGAACCTTTTTGTTGACGAGAATATCC AAGAAAAATACACTTTCTAGCATGAGTGAACAGCTTATATGCCTTGGAGAAAGATCATGAACAATGCACGAGGATGAACA AAATAAATGGGATCTTAGGAAATAACAAGGGATGAGGAACTTGATTGCTTAAAATAGAGGATGACGTTCTACTTATTTAA TACCCAGCAGTGAGAACAACACCCCCAAATAATTTAGGGGAGCATTAGCATTTAATAAGAAAGATCGGTCACTGTCAACA ATATGCCTATTTTTCTTTTAGGTGTTCCATTTTTCTGTGGTGTATGAGGACAACTAGACTGGTTTTGAATTCCATGGGTG ATCATGAATGATTTAAAACAATCAGAAAAATATTCCTTGGCATTCAAAATGAAATTTGTCTTGCCAAATTGAATTTTGAT CTCTTAACAAATTTTTTAGAAGATACTATATAGCTTAGAACAATCTTTCATTAAAAGTAGTCAAGTGCACCTTGAAAAAT CATCAGAAAAAGCACCTTAAACAGACACGACTAGGACCCTAAACATCAAAGTGAACAATATCAAAAGGAGAAAAAGCTCG TTTATCAGTACTACTAGAACTAGAATATGAAGCTCTAATTTTCAGAGTTGACATGACTCACTCTAAAGAATAACCATAGA AGATGAGGTACCATTTTCCTTAAATTTTCTGAACATGAATGATTAAGGTGACGATGAAGCAAACTAGGGGATTTGGCAGT AGTACATATGGTGGAAGTGGTTGGCTGATGGTAGTAGTCTTTGTGATTCAGATCCGGTTCCAATCTTCTGTACTATATTT GGTCCGGTATCAGAAAAGAGTTGGAGATACAGGTTTGGGTACAATATAGTTGTTTTCCTTGTCGAAGTAAGATTAAAAAT AGTAGGCTTGTTAGAAAGGGTAGGCTTGTTAAAAAGGGTAGGATCCATAGAGAAAAACAGCTTGTGTAGGCTTGTTACAG CTTACTTCCTTGTATTAGAAAGTTTACATGTATGAGTAAATAGCTTAATTAAGCATTTGTTTATCACACGGGAACTTGTG TCAAAAGAGCTTATTCAATAAGCGCTTACTAACAAACTTGCCTGAGAAGCTTATTAAAATAAATTCAAAAGATCTTATAG GTAGTTTGCAAGTTATTTCCTAAGCTCAACCAATAAGTTTTAAGATAAGTTCAAATAAACTCCAGAAAAGCTCTTCCTGG GACCTGGAATTTTTCTTTAACAATGTCAATTCATTGTTAGAATTAGAATCCTTTACTGATGTGCACTTCTTGCTCCCAGT CCCCGTGAGGAGCTGTTATGACCCATCATGATCCTTTCATTTATGTGGGTATCTTTTACAGAAGAAATTATGGCTAAGTA TTGAAGTCTATTACATATTTAGTTTCATCCAGCTTACTCCTTTGTGATAATAAATCAGAAACTATATTATACAATTCAGA AACCTGTTGGACTCACCAAGAATAAAAAAAACAAAAACTAATCTGTTGGAAATCCGTACGGCGAAACTTTTTTATTCATT TCAATATTATGTCCGAATTGCAGTGACATATAGGGTTTAATCTTAAGCACCTCTTATGCTCATCATTCTTGCTAATATTG TCAGTGATACAGTTACCGTTCTTGTGAGTTCATTAACCTCTCCGAGTTGCATGCCTGATGTTTTGTGTTCTGCAGGTAGG ACCATCAACCTTTTTCAGCGCAAAACAATTCGAAGTTTTTGACGTTGAACTGTTAGGTATACAGAACTGTGAAAGAAGGA CTGTATTAGCCTTTTACTCTGATGTTGTATGCAATTGAGACAAGGCTTCCATTTGAGCTGTAGGAACTAGATTATGAGTT AACTACATAGAAGCAGTAAACTCACAACCCTTAAGTTTCTTGATTTGAGGCAATCATTATTCATCATTATCAAGTTTCTT TCTTTGGCGCATATTGTTCAGTATTATTTTGTCTGGTTTGTAACACTGTCCATCATCAAGAATGGATGGTAAGGTATTCA TTGTGAAATTACTTAGAACTAGATGTTAGACCCGCCCGTTGCGCGGCATATAATAATTTTTTTTTTAAGTAAAATGATAT ATATTTTAAAACATAAATGAAATGCAAAGA
CDS sequence (LotjaGi3g1v0065500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAACTTCTCTCTTGAACTTCCCATTTTCTGTACAAGGAACTATATTTTCTCAAAGGAAACAACTAACGCATCGATA CACAAATCAGAAATCAGAGGAGTATCCAGTTCAAGATAGCTGTATACTACATTCTGCGAGAGCATTGAGGAGGAAACTTT TGCTTTCTGTTTTGGTTTCAACTGGTGTTTTTCCAACTTTATCTTCATATGGGAAGACAAAGGGTATTAATCCGTTTAAT GAAAAACGGTTGCTACAACAAAATAAGCAGATACAGAAAGCAAACTATGCGCCAGAAGACTTCCCAAATTTTATTAGAGA AGGTTTTGAAGTTAAAGTAATATCATCAGAGAACTATATTAAGTGTGATTCAGGACTCATTTACCGAGATTTTGAAGTTG GTAAAGGTGATTGCCCAAAGGATGGTCAGCAGGTCACATTTCACTATACTGGTTATAACGAATCGGGCCGTCGTATTGAC AGCACTTATTTGCAGGGTTCTCCTGCCAAAATTCGCATGGGTACTAAGGCACTAGTTCCAGGGTTTGAGGAAGGAATTAA AGACATGAGACCAGGTGGAAAGAGAAGAATCATTATTCCCCCTGAACTTGGACCACCGGTAGGACCATCAACCTTTTTCA GCGCAAAACAATTCGAAGTTTTTGACGTTGAACTGTTAGGTATACAGAACTGTGAAAGAAGGACTGTATTAGCCTTTTAC TCTGATGTTGTATGCAATTGA
Protein sequence (LotjaGi3g1v0065500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGTSLLNFPFSVQGTIFSQRKQLTHRYTNQKSEEYPVQDSCILHSARALRRKLLLSVLVSTGVFPTLSSYGKTKGINPFN EKRLLQQNKQIQKANYAPEDFPNFIREGFEVKVISSENYIKCDSGLIYRDFEVGKGDCPKDGQQVTFHYTGYNESGRRID STYLQGSPAKIRMGTKALVPGFEEGIKDMRPGGKRRIIIPPELGPPVGPSTFFSAKQFEVFDVELLGIQNCERRTVLAFY SDVVCN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 52 | 52 | - | – | |
| PANTHER | 13 | 246 | 234 | 6.5E-127 | – | |
| Phobius | 53 | 71 | 19 | - | – | |
| Phobius | 72 | 246 | 175 | - | – | |
| SUPERFAMILY | 79 | 229 | 151 | 9.43E-31 | – | |
| Gene3D | 113 | 230 | 118 | 1.5E-31 | – | |
| Pfam | 139 | 225 | 87 | 4.6E-17 | ||
| ProSiteProfiles | 142 | 229 | 88 | 16.742 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Peptidyl-prolyl cis-trans isomerase activity | Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0). |
Expression pattern of LotjaGi3g1v0065500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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