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LotjaGi3g1v0069800.1

Overview

Field Value
Gene ID LotjaGi3g1v0069800
Transcript ID LotjaGi3g1v0069800.1
Lotus japonicus genome version Gifu v1.2
Description Cell wall invertase; TAIR: AT3G13790.3 Glycosyl hydrolases family 32 protein; Swiss-Prot: sp|Q56UD1|INV5_ORYSJ Beta-fructofuranosidase, insoluble isoenzyme 5; TrEMBL-Plants: tr|A0A078GGB7|A0A078GGB7_BRANA BnaC05g39510D protein; Found in the gene: LotjaGi3g1v0069800
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:7599132..7603110) extracted from Lotus japonicus Gifu genome v1.2.

TAACAATCTACTATTTTCCCATAAATGGATGATTAGGATTTTTCTGGAGAGTGATGCAGTAGGACTCCATTCACCTCATG TACTAAACTATAAGATATACTTAGCATATCTCTGCTGATCATCATTTGAGTTAATGAATAATTGATGTGAAAATCAAATT TATCTTTCATTAGTTATGAGGTGTGTGCTCATCCCTTGGCTGAAAATTTTGCTAATTGTGTTTTCCGATCATGTTAATTA GGGCCAATGATATACAAGGGACTCTACCACATGTTCTACCAACACAATCCAAAAGCTGCAATTTGGAGCAACAATAGCAT TGTATGGGGCCACTCTGTTTCATTAGATCTCATTAACTGGTTCCCATTACAACCAGCTCTCACCCCAACTCAACCCTATG ACATCAATGGCTGTTGGTCAGGTTCAACCACACTTCTCCATGGTGCCAAACCAGTTATCTTATACACAGGCAATAACTAC AATGAGGACCAAACTCAAAACTTGGCTATACCCAAAAATGTTTCTGACCCATTTCTTAGAGAATGGGTAAAATCACCAAA GAACCCTGTAATGAGACCCACTAGGGGTAATAAAATCAATGGTACTTCATTTAGAGACCCCACCACTGCTTGGCTTGGTC ATGATGGGTTTTGGAGGGTAATTGTGGGAAGCCAAATAGGTAACAATGGAATTGCACTTTTATATCTTAGCAAAGATTTT GTGAATTGGGTTGAAGCCAAACATGCTTTGCATTCAGCTAAGAAAACAGGGATGTGGGAGTGTCCTGATTTCTACCCTGT ATTGGTTCACGGTTCAGATGGGCTTGACACTTCTGCAATTAATGGTCCTGGTCATCACGTTAGGCATGTGCTCAAGGTTA GTTTATTTGATGTGGCACATGATTGTTATCTTATTGGAACTTATGACATTATCAAGGATGTGTTTATACCTGATAAGGGT TTTGAGGACAATTTGGTCATGAGATATGATTATGGGAAGTTTTATGCTTCTAAAACGTTTTATGATGGTGTAAAAAAGCG AAGGGTGTTGTGGGGTTGGGTTAATGAATCTTCAGTTCGGGAAGATGACATTCAAAAAGGATGGTCAGGAATTCAGGAAA GAATTTTGTGAAAAAATGCGAGCAACACTCATTTTAGCACTTTATTTTCAACACTCTCTCATTAATTAGTTGAAATTCAT GGAAGATCCGCTAAAAATATGGATCACTTCTTAGTTACTGGGATTCACATGATTTTTAATGAATAAATTTAAGAGTGTTG AAAAGAAAGGGTTAAAGTGAGTGGCATTGTTCTGCTTATTCAACTTATGAACCCTTACTCAAAATATTTACCCAATTAAT TAATTAATTAATTTGGCTTCAATTATTAATTAATTAAACATATGGGCACATGAATTTTGTAGGCAATTCCTAGGACTCTA TGGCTTCATAAATCTGGGAAGCAATTGGTACAGTGGCCTATAGTGGAAATTGAAAAACTACGTACCAACCCTGTAAACTT ACATTCCAAAGTGCTCAAGGGAGGCACATTGCTTGAAGTTTCTGGTGTGACAGCAGCACAAGTGAGTTTTATTTGCTACA ATTTAATGTATGTTTAGTTCCACGGTAAAATGGTCTAGAATTACTTTGAATTTGGATTGCTTGCAATAACAGAATTCCTA AATTCATTATGATAAGGATTCTGATCAAAGATTGGACAACTCAACTTTTAAGTTTATATGTCCATTTGATTTTACTAAAA TATATAAGCCGACTTATCTTAATCTAACTATTTATATCCATTCACTGTGAGAATTTAAGATTGCTTGCGTGGAACTTAAA TACGTCATACCTGCTATAAGCCTAACAAAAATGCCAAACCACAAATAGTGGGAGGCAAACAGAACATGACAACATATACA CATATATAAGTACATACATATTTGTTGCTTCACTATTGGGGTGTGAATATAAGCGTGCAAAATTTGTTCAATATTGTCAT TTTTCCTTTGCAGGCTGATGTTGAAATTTCATTTGAAGTGAGTGAGCTTGGAAAGGCACAAGCATTGGACCCAAATTTGA AACTATACCCTCAACATCTCTGTAGTGGAAAGGGCCCAAAAGAAGTGAAAGGAGGATTGGGACCGTTTGGTTTGCTAGTT TTGGCTTCAAAGGGCATGCAAGAGTACACATCAGTGTTCTTTAAGGTATATAGGGTAAACAAAAGTTATGTGGTGCTCAT GTGCAGTGACCAAAGCAGGTACGTGTCACTCGTTTTTCACTATCCATAATCAAATTCTCACAAAAAAAAGGCCACTTTTA AGCAAACTCTTTTGATAGGTCTTCTTTGGATCACAAGAACGATTTGACCACTTATGGAGCTTTTGTGGATGTGGACCCTG TTCACGAGGAGTTGTCAATAAGAACCTTGGTGAGTTGTAATAATATAATCATAAGATGCACAAGCAAAAATAAGTGAATA TAATTTAAGAATTGACAGAAGGTTTTCTTTGGACCAAATAATAACCTTCGATTAACCCTTCAAGTTCAATTGATTTTACC ATTAGATATAAAATGATGCTCTAGTGAGTGATGTAGAGGGAAACCCATCAAGTTCATATTTTCTTACTATACACTTTAGA AATATCTAATAATTTTTCCTATCACTCTGTACTTTTCACAGATAGATCACTCTGTAGTGGAGAGTTTTGGGGGTCATGGA AAAGCATGCATCACTGCAAGAGTTTATCCCACGTTGGCAATCGATGGTAAGGCACACCTGCATGCGTTCAACAATGGAAC AGTTGATGTTAAGATCACAAGATTAAGTGCTTGGAGCATGAAAAAAGCAAAGAAAATGAATTGAAATCAAGAATAAGAGC AAATAGTAAGAAATAAGTAAGCAAGAATTAGTAGTCTCTTTCTATTCTTGTACTAGCTAGCCGTTGATCGGACATGTTGT GCCATTCCTTTTTTTTAATCAGCCAAATTTATATATATATATAGAGAGCACAAGATGTGCTATTAAATAATGTCGTGCCA TTCCTTATTGTTGGCATTTGAAAATAAAAGCTGTTATCATTTTCTATTTATTCAATATCAGGCACTTGGTTTAATTCAAT TTTGAACATATATGGCTCCATCAAAGTTAGTGTTAGTTAATTATGATTTAAAAAGAAGTTAGGGTTAGTTAAATATATTT TTGTCCCTCTAAAAAGAAGTTAGGTGGTGCTAGGTGGTTTGGTTTGAGATTAGAGGTTGATTTTACTAGTTTGAATAAGA AAGGATAGAGAACGCTCAAGAATGTGAAGAACATTCAGGAAGATGATTTTTCTAGTCTGAATAAGGATAGATAACGCGCT AGCTCATGAAGGTTTCTCAGCGACAGCTCAGAAAAACAACAATTTCTAAGACTCCAATGATGAAGGAGAAGAGGGAATAT CGAGGATAGTCCAAAGCTACTTCGGTGGTTGCAGTGGCATCTGTTACTGGGTAAAAATTTAAACTTGAGCAAAACCCTTT CGGTGGAGCCACATGCAAGAAGATCTGGAACCAATCTCTCTCTCTCTCTCTCTAACTTTGCATGTTGGGAGGTTGCAGGT TTTCGACAGTATTAATTTTGTTGGGTTGCAGGGTTTTGAAATTGAAGGTTTAGTTTACATGGTTTTGGGTTTGGTTTGAG ATTAGAGGTTGATTTCGCTAGTTTGAATTAGAAAGGCTAGAGAATGCTCACGAAGGTGAAGAACATTCATGAAGATGAAG ATGAAGTTAGATGAAGAGAAGATTTTATTCTGGATTTTTCATGATTTTGTGTCTTTTGGGTTTTTTATGAAGATGAAGAT GAAGCTTATGTTTGTTTGGTTAATGTAATGATTAAATAAGATCAGTTAATTATGGATTGCAGTTTTTTTTTAATTTTTAA TTTTAATTAATAATGTAATTAAATTTAATTATATATGAGAAATTAATGAAAGAGTTTTG
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0069800.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGATATACAAGGGACTCTACCACATGTTCTACCAACACAATCCAAAAGCTGCAATTTGGAGCAACAATAGCATTGTATG GGGCCACTCTGTTTCATTAGATCTCATTAACTGGTTCCCATTACAACCAGCTCTCACCCCAACTCAACCCTATGACATCA ATGGCTGTTGGTCAGGTTCAACCACACTTCTCCATGGTGCCAAACCAGTTATCTTATACACAGGCAATAACTACAATGAG GACCAAACTCAAAACTTGGCTATACCCAAAAATGTTTCTGACCCATTTCTTAGAGAATGGGTAAAATCACCAAAGAACCC TGTAATGAGACCCACTAGGGGTAATAAAATCAATGGTACTTCATTTAGAGACCCCACCACTGCTTGGCTTGGTCATGATG GGTTTTGGAGGGTAATTGTGGGAAGCCAAATAGGTAACAATGGAATTGCACTTTTATATCTTAGCAAAGATTTTGTGAAT TGGGTTGAAGCCAAACATGCTTTGCATTCAGCTAAGAAAACAGGGATGTGGGAGTGTCCTGATTTCTACCCTGTATTGGT TCACGGTTCAGATGGGCTTGACACTTCTGCAATTAATGGTCCTGGTCATCACGTTAGGCATGTGCTCAAGGCAATTCCTA GGACTCTATGGCTTCATAAATCTGGGAAGCAATTGGTACAGTGGCCTATAGTGGAAATTGAAAAACTACGTACCAACCCT GTAAACTTACATTCCAAAGTGCTCAAGGGAGGCACATTGCTTGAAGTTTCTGGTGTGACAGCAGCACAAGCTGATGTTGA AATTTCATTTGAAGTGAGTGAGCTTGGAAAGGCACAAGCATTGGACCCAAATTTGAAACTATACCCTCAACATCTCTGTA GTGGAAAGGGCCCAAAAGAAGTGAAAGGAGGATTGGGACCGTTTGGTTTGCTAGTTTTGGCTTCAAAGGGCATGCAAGAG TACACATCAGTGTTCTTTAAGGTATATAGGGTAAACAAAAGTTATGTGGTGCTCATGTGCAGTGACCAAAGCAGGTCTTC TTTGGATCACAAGAACGATTTGACCACTTATGGAGCTTTTGTGGATGTGGACCCTGTTCACGAGGAGTTGTCAATAAGAA CCTTGATAGATCACTCTGTAGTGGAGAGTTTTGGGGGTCATGGAAAAGCATGCATCACTGCAAGAGTTTATCCCACGTTG GCAATCGATGGTAAGGCACACCTGCATGCGTTCAACAATGGAACAGTTGATGTTAAGATCACAAGATTAAGTGCTTGGAG CATGAAAAAAGCAAAGAAAATGAATTGA
Download CDS Sequence

Protein sequence (LotjaGi3g1v0069800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MIYKGLYHMFYQHNPKAAIWSNNSIVWGHSVSLDLINWFPLQPALTPTQPYDINGCWSGSTTLLHGAKPVILYTGNNYNE DQTQNLAIPKNVSDPFLREWVKSPKNPVMRPTRGNKINGTSFRDPTTAWLGHDGFWRVIVGSQIGNNGIALLYLSKDFVN WVEAKHALHSAKKTGMWECPDFYPVLVHGSDGLDTSAINGPGHHVRHVLKAIPRTLWLHKSGKQLVQWPIVEIEKLRTNP VNLHSKVLKGGTLLEVSGVTAAQADVEISFEVSELGKAQALDPNLKLYPQHLCSGKGPKEVKGGLGPFGLLVLASKGMQE YTSVFFKVYRVNKSYVVLMCSDQSRSSLDHKNDLTTYGAFVDVDPVHEELSIRTLIDHSVVESFGGHGKACITARVYPTL AIDGKAHLHAFNNGTVDVKITRLSAWSMKKAKKMN
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR31953
1 210 210 3.6E-221 –
Pfam
PF00251
1 200 200 9.1E-60
IPR013148
SMART
SM00640
1 388 388 3.4E-145
IPR001362
PANTHER
PTHR31953:SF56
1 210 210 3.6E-221 –
CDD
cd18624
1 211 211 3.882E-103 –
Gene3D
G3DSA:2.115.10.20
1 211 211 3.1E-62
IPR023296
SUPERFAMILY
SSF75005
2 230 229 2.36E-59
IPR023296
PANTHER
PTHR31953:SF56
209 432 224 3.6E-221 –
PANTHER
PTHR31953
209 432 224 3.6E-221 –
SUPERFAMILY
SSF49899
229 430 202 4.51E-33
IPR013320
Pfam
PF08244
232 427 196 3.1E-29
IPR013189
Gene3D
G3DSA:2.60.120.560
238 428 191 1.1E-72 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004553
Molecular function Hydrolase activity, hydrolyzing O-glycosyl compounds Catalysis of the hydrolysis of any O-glycosyl bond.
Subterm of
GO:0005975
Biological process Carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0069800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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