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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0072200 |
| Transcript ID | LotjaGi3g1v0072200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Invertase/pectin methylesterase inhibitor family protein; TAIR: AT5G46940.1 Plant invertase/pectin methylesterase inhibitor superfamily protein; Swiss-Prot: sp|Q8GT41|PLA1_PLAAC Putative invertase inhibitor; TrEMBL-Plants: tr|G7LDE9|G7LDE9_MEDTR Plant invertase/pectin methylesterase inhibitor; Found in the gene: LotjaGi3g1v0072200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:7840384..7841264) extracted from Lotus japonicus Gifu genome v1.2.
AGAAAACAATCTTTCCACCCACCACCACTTCTTAAAGCTATAAAAATTTACCTATTACACATTGTAACCTTCGTCATGAA CTCTAGGCAAGTCCAAAATTCCAAACAAAGAAAATGAACCTTCCCACTTTCCTTTTGCTCACTCTCGCAATACTCTTATC TTCTTTCCATTCTTTTGTTGATGCTAATAACCATCTCATTCAACAAACCTGCAGGAATTGCTCAAAAAGTGATCCCAACA TAAGCTACAATTTTTGCATAACATCTTTTCAATCAGACCGTAGGAGCCACTGTGCCCAAAACCTCCACGAACTAGGCCTC ATCTCTATCAAGATTACAAGGCGCAACGTGACGGATATAATATCTAAGATCAAGGAGCTTTTGAAGAAGAAGAGCTTGGA CACGCTTATCAAAGAGTGCTTAGATGATTGCCTTGAAGTTTACTCTGATTCCATTACAACAATTAGAGAAGCTATTAGAG ATTACAAGGCCAAGCGTTATGCGAATTCTAACGTCAAGATAAGCTCGGTTTTAGATGCATCTACAACATGCGAAGATGGA TTCAGGGAAAAGAGCGATGTCGTTGCGCCATTGAGTAAGAGAAACAAGGATGTTTTTCAGCTTTCTGCTATAGCTCTTTC GATTATTAACATGCTCAATGTGGATAAATTGATGGGTCCGTTTTGATTTTTTAATGGTTTGGGTAGTAAATTAATCATCA TTCATTGTAATTTATTCATAATGTTTTGCTATGTTCTTGGTTTGAGCTCTTTGATTGTATGTTACTCCAGTCTTCATTTT GAAAGATGAACTATAATGTATGAAAAATGGATTGTCTAATGTAATTGGATGGTGAATTATTTAACCTAAACTTTCTCATT G
CDS sequence (LotjaGi3g1v0072200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAACCTTCCCACTTTCCTTTTGCTCACTCTCGCAATACTCTTATCTTCTTTCCATTCTTTTGTTGATGCTAATAACCA TCTCATTCAACAAACCTGCAGGAATTGCTCAAAAAGTGATCCCAACATAAGCTACAATTTTTGCATAACATCTTTTCAAT CAGACCGTAGGAGCCACTGTGCCCAAAACCTCCACGAACTAGGCCTCATCTCTATCAAGATTACAAGGCGCAACGTGACG GATATAATATCTAAGATCAAGGAGCTTTTGAAGAAGAAGAGCTTGGACACGCTTATCAAAGAGTGCTTAGATGATTGCCT TGAAGTTTACTCTGATTCCATTACAACAATTAGAGAAGCTATTAGAGATTACAAGGCCAAGCGTTATGCGAATTCTAACG TCAAGATAAGCTCGGTTTTAGATGCATCTACAACATGCGAAGATGGATTCAGGGAAAAGAGCGATGTCGTTGCGCCATTG AGTAAGAGAAACAAGGATGTTTTTCAGCTTTCTGCTATAGCTCTTTCGATTATTAACATGCTCAATGTGGATAAATTGAT GGGTCCGTTTTGA
Protein sequence (LotjaGi3g1v0072200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNLPTFLLLTLAILLSSFHSFVDANNHLIQQTCRNCSKSDPNISYNFCITSFQSDRRSHCAQNLHELGLISIKITRRNVT DIISKIKELLKKKSLDTLIKECLDDCLEVYSDSITTIREAIRDYKAKRYANSNVKISSVLDASTTCEDGFREKSDVVAPL SKRNKDVFQLSAIALSIINMLNVDKLMGPF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 24 | 24 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 24 | 24 | - | – | |
| Phobius | 1 | 4 | 4 | - | – | |
| Phobius | 1 | 24 | 24 | - | – | |
| SignalP_EUK | 1 | 24 | 24 | - | – | |
| Phobius | 5 | 16 | 12 | - | – | |
| TIGRFAM | 6 | 181 | 176 | 1.4E-38 | ||
| PANTHER | 7 | 179 | 173 | 9.1E-52 | – | |
| PANTHER | 7 | 179 | 173 | 9.1E-52 | – | |
| Phobius | 17 | 24 | 8 | - | – | |
| SMART | 24 | 177 | 154 | 3.7E-26 | ||
| Gene3D | 24 | 183 | 160 | 2.2E-38 | ||
| Phobius | 25 | 190 | 166 | - | – | |
| SUPERFAMILY | 26 | 181 | 156 | 5.62E-36 | ||
| Pfam | 28 | 177 | 150 | 7.0E-28 | ||
| CDD | 33 | 180 | 148 | 1.61844E-50 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Enzyme inhibitor activity | Binds to and stops, prevents or reduces the activity of an enzyme. |
Expression pattern of LotjaGi3g1v0072200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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