Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0081000 |
| Transcript ID | LotjaGi3g1v0081000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | basic helix-loop-helix (bHLH) DNA-binding superfamily protein; TAIR: AT3G20640.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Swiss-Prot: sp|Q8GXT3|BH123_ARATH Transcription factor bHLH123; TrEMBL-Plants: tr|A0A0L9UMF0|A0A0L9UMF0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0081000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:9022995..9027298) extracted from Lotus japonicus Gifu genome v1.2.
GAAAATTCTGAGAAATCCTACATCTGTAAGAAAAAGAAGAGAAAAACAACTAGTAGAAAACAGAAGTTTATAGTGAAATT GATCATCCCTTGATATAATTCTTGTGTCTTATCAATGACCTCCAGAATTAATATCTAAGTGTTAACTGTATTCCAGTTAG TCGGTTACTCTTCTCATTCATTCTTGTCTTGCTGCTGTCTTTCTCTCTTCAGCTGTCAATATAAATACTGAGAAGCAGCG CATCGTTTCTCCATTCATTTTCACCAAACTCACACTCATTCACAACCCAAATAGTAGATCATAGAGCACCCAAATTCTAG CTAGCTTAATTTTTCATTTTTTATCATTCATAATTTATAGCTAGACACTGGAGGGAGAAGAACCAAACAACATTTGTTAG ATTCTTCATCAAATTAAGCCATGGCAGATGAAGAATTTCAAGCTAGTGGAAACTGGTGGGACAAAGCAAGAAACTTGAGA TTTTCGAGTGGGGCATCACAATCATCTTCCTCTAGCATCACCAACATGGGAAATTTTCCATGGCAATCTCAAGATATTGA AGAAGTGAAGCAAGATTCTTCCACTTCCATTGACCCCAAACTTCACATGATGGGTTTAGGCCTTTCATCCCAACCCATGG ATTGGAATCAAGCATCTTTGTTGTAAGTGCAAAAAGAAATTAACAAACCACCCATATATCTTTTTTCTCCTCTCTTTCTC TTTCTAAAAATTGTGTCTTTTTGTTGTTGTTGTTGTGTTTGTTTGATGGTGATAGACGAGGTGAGAAGGGAACAGAGAAC TGCAGTTTCCGGTCGATGTTGCAAGAGAATTTGAACTCATCATCAAGTGAACAACAAATTTTGTTCACTCCAGAAGAGTC TTCAAGCAATGATGAATACAACAAGCAAGTAGTGAATAGGGGTAGTTTCTCTTTGGATCAAAACCAAGGATTGCTTTCTA CTTTTCAGATTGATTCCTCCTCAGCTTTATATGGAAACCCATCATCAATGTTACAAGGACTCTTGGGACCTGAAAACAAC AACAATATGGGTTTCCCACACTATGGTTCAAACTCCCATGAGGTTCCTCAATTCTTGAGAGCTTCACCTCCAAATCCACA ACCACCACTCATGAGTAACCAGTTGCATTTCACCAACAACGCGCCGTTTTGGAACGCTTCTGAGGCTGCTGCTCCCATCA AAGATGTAAGATCCAGCTTCTTCCCCTCTATGCAACCCTCATTCTCCACACCAAATTTCCATGTGCAGTCAAAGGTATTT ACCGGTTCATCACAGCAAATTTTACCACACCACACAGCATAAACACTCAACATAAACCACATTCATCACATCATATACAA AATTCTAATTAAACTGAGGTTGCGGTTGCATCTCGGTGCTTGATATCGCGGAAAATTTCAGACAACTGCAATCACCCACG CAATTACATGCGTGATGCGGTTTTGATAAATATACGCGCTTCAATTGCTCTTCTACTTATTTCCCCCAATTTTATCTTTC TATTTCTTTTTCTATCTAATCGCTCATCATATTGTTCATTTTCATCACTTCTATTCTCATCAAATCGATAGTCAGATTAC TCATTTTTCTCTATTATTCTAGTTTCGAGTGAGACTAGATATGAACCATCAACTTACATTTTTTCCAATAGTTTCATGCA TGAATATATAGTTTACAAGTTTCTTTGCAAATTAATTATGACTCATAAATATTGTAAATAACATGTAAGTAAAAACCTTG TTCATATGTGGACCAATTGTAGAATTGCCCATATATATCATACATATTAGAATTGAAGCAGTGCATTTGATGGTGTACTC TTTCGGGTTATGATTCATTTTGGCCTCACTTTCTCTTCCACTTAATTTTTACTTATTTTTGTTTTTATCTCTCTTCTATT CTATCACTAATTTCTTTACCTATTTCTCATGAGGTGGAGATGGCTATAGAGAGCGTATGAACCTTTATTCTAAAGTTTTT AATTCGCATAATCATGGCTATGCAGAATATATCTGAAGTACTGAGGGACTCGGGTGTTGTGAGAAAGAAAAGTGGGAGTG AACCACCACCCAAGAGAACTCGTAACGAAACCCCATCTCCTATGCCAGCTTTTAAGGTACAATAAGTGCAACTAACCTTT TAACAAGAAGTGAAGCTTTAAACTTTTTATCTTTAATTTTATTTTTCTTACTTTAAATCCACAAACATGGATACATATAT ATGAGCCTGTGATTTTACTTTGTTGGCTCTTAGGTGAGAAAAGAGAAAATGGGGGACAGAATCACTGCGCTCCAACAATT AGTGTCGCCTTTTGGAAAGGTTGGCTAGCTTCCAATTAATAAAATCTGTGAATGTATCATTTCCTTTGTGAACTTAACTT CTATAATGATGATTTCTTTTAATTTTATGCTAATGATCATGTTTATTGATATAAGTTCAAAAATTTGTTTGTTGTGTCAG ACTGATACAGCATCGGTGCTCTCTGAAGCCCTTGAATACATCAAATTCCTCCATGAACAGGTTACAGTAAGTTCCATTAC CCATTAATTAATATATTGTCAATAAAAAAACCTAAAAGTATTAGAAAATTAACTTTCATCTTATGGGTATATGCTTTGTG TTTTTGTTCCTATAGGTTTTAAGCACGCCGTATATGAAAAGTGGAGCTCCAGTACAGATTCAACAGGTAGCATCCCTAAT ATATTTCTAATATTCCACACATATATTAAAAGAATAATAAGAAGTATTTATTCATGTTTTACCCTTGTGCTTCTATTTTT TTTGGTACATCAGAAAACCCTTATGCTTAATGAATCTTTAGCTTATAAGAAAAAATCAAAAAGAAAATAAAAATATGAAG TGTTACTTTTACATTAACTTTATACTTTTCTTTACAATTTTTCCCCACTTTCCATCTGATCACAACCCTAATTTTTACAC ATTCCAACAAATCTCCTTGTCATTTTTTCTCTCTTTTACTAATTATTAGGAGATTTTAAAATAAGGGGAAGGGTTTGAAG AATTTCTAAAAACCTTAGAAATCCTTCTCTTAATTATATTTTTTAGTTCTTCAGAGTTTAGGTAATTTTGGAGAATTTTA AACTTGCAACAAGAAAATGGTTTAAAATTTTAACCTCCCTTCTCCCTCTCTGGCCTCCCTATCATTTCTCTCAAAGTTCT TCCCTTCCACTCTCTTAAAATCTCTCAAAGAAAGCCTTTGGAAGCTTTTATTCTTAATTTAACAACACGATGGATAAGAA AAGAAATAGAAACATTTGATTCACATGAGTTGATGCAATTACTTAACTTTTTCCAAATTTAGTAATTATAACACTTTTTT TTGCCTTTTTTAATGTAGAGTTCTGGTAAATCAAAAGTAGGTGAAGGTCCAAAGCAGGATCTTAGAAGCAGAGGGCTATG CTTGGTGCCAGTTTCAAGTACATTTCCAATGACTCATGAAACTACAGTTGATTTTTGGACACCAACATTCGGAGGAGGAA CTTCAAGATAATTGATAAATGAATATATGGATAATTGGAACACGGAACCAATTAATACCCTGCAATTATGTAGGACATTG ATTCATGTACCTTATCAAACCTGGCCAAGTTGGGAATGATAAGATGAAAGAAAAGAGAAAGACGAAAGAGGACACAGAAG GCCATATTAATATGTAAAGTTAGAAAAAGCATGTCCACGACATGGACACTTAACATTGTGATGTCTGAAATATATATAGG ACACTAGCACACTGTAATATTTACATGTGAGAGAAGAGAGAGTCAATCTTTACCATTCATGTATGATTGTATGGTTAAGA TTAACTTTTCTTACTTCTCATATTATTCTTGATACTTTCCCTACATGTATATACTATGTGGGGGGTATAAGGGTGAACAT GGAGTTAAGTAAATTTTCCAAATGATTTAAGATGAGTCGGTGATCTATTGTAATATTTTTTAGGAATTTTTATATGTAAG ATATCTTAGTTTAAAGTTGTTTAAAAATAAAGTGAAAGTTTTTGATTCAGAGTTGCATCATTTATGTGTCATGTCTTATT TCATTGTTGTGTTAGTTAAGTGTCCTTAAAGTGTTAGGTTGTTAGCTAAATATCTGAGTCGCTAAAAATAGTTTTGTTTT AATTAAAATACGTGTCATATGAGGTATTGTAAAGGTGTTCAATTTTTTCATATCTCAAGCAGGCAAAATGTATAAAAAAA AAAGGGAAAGAAGAAAATGTTGAAAGAGAAATAAAGGGAAATGAGTCAAATGACCCTCCCAAAA
CDS sequence (LotjaGi3g1v0081000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGATGAAGAATTTCAAGCTAGTGGAAACTGGTGGGACAAAGCAAGAAACTTGAGATTTTCGAGTGGGGCATCACA ATCATCTTCCTCTAGCATCACCAACATGGGAAATTTTCCATGGCAATCTCAAGATATTGAAGAAGTGAAGCAAGATTCTT CCACTTCCATTGACCCCAAACTTCACATGATGGGTTTAGGCCTTTCATCCCAACCCATGGATTGGAATCAAGCATCTTTG TTACGAGGTGAGAAGGGAACAGAGAACTGCAGTTTCCGGTCGATGTTGCAAGAGAATTTGAACTCATCATCAAGTGAACA ACAAATTTTGTTCACTCCAGAAGAGTCTTCAAGCAATGATGAATACAACAAGCAAGTAGTGAATAGGGGTAGTTTCTCTT TGGATCAAAACCAAGGATTGCTTTCTACTTTTCAGATTGATTCCTCCTCAGCTTTATATGGAAACCCATCATCAATGTTA CAAGGACTCTTGGGACCTGAAAACAACAACAATATGGGTTTCCCACACTATGGTTCAAACTCCCATGAGGTTCCTCAATT CTTGAGAGCTTCACCTCCAAATCCACAACCACCACTCATGAGTAACCAGTTGCATTTCACCAACAACGCGCCGTTTTGGA ACGCTTCTGAGGCTGCTGCTCCCATCAAAGATGTAAGATCCAGCTTCTTCCCCTCTATGCAACCCTCATTCTCCACACCA AATTTCCATGTGCAGTCAAAGAATATATCTGAAGTACTGAGGGACTCGGGTGTTGTGAGAAAGAAAAGTGGGAGTGAACC ACCACCCAAGAGAACTCGTAACGAAACCCCATCTCCTATGCCAGCTTTTAAGGTGAGAAAAGAGAAAATGGGGGACAGAA TCACTGCGCTCCAACAATTAGTGTCGCCTTTTGGAAAGACTGATACAGCATCGGTGCTCTCTGAAGCCCTTGAATACATC AAATTCCTCCATGAACAGGTTACAGTTTTAAGCACGCCGTATATGAAAAGTGGAGCTCCAGTACAGATTCAACAGAGTTC TGGTAAATCAAAAGTAGGTGAAGGTCCAAAGCAGGATCTTAGAAGCAGAGGGCTATGCTTGGTGCCAGTTTCAAGTACAT TTCCAATGACTCATGAAACTACAGTTGATTTTTGGACACCAACATTCGGAGGAGGAACTTCAAGATAA
Protein sequence (LotjaGi3g1v0081000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MADEEFQASGNWWDKARNLRFSSGASQSSSSSITNMGNFPWQSQDIEEVKQDSSTSIDPKLHMMGLGLSSQPMDWNQASL LRGEKGTENCSFRSMLQENLNSSSSEQQILFTPEESSSNDEYNKQVVNRGSFSLDQNQGLLSTFQIDSSSALYGNPSSML QGLLGPENNNNMGFPHYGSNSHEVPQFLRASPPNPQPPLMSNQLHFTNNAPFWNASEAAAPIKDVRSSFFPSMQPSFSTP NFHVQSKNISEVLRDSGVVRKKSGSEPPPKRTRNETPSPMPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEALEYI KFLHEQVTVLSTPYMKSGAPVQIQQSSGKSKVGEGPKQDLRSRGLCLVPVSSTFPMTHETTVDFWTPTFGGGTSR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 143 | 143 | 1.3E-135 | – | |
| PANTHER | 1 | 143 | 143 | 1.3E-135 | – | |
| MobiDBLite | 23 | 50 | 28 | - | – | |
| MobiDBLite | 23 | 55 | 33 | - | – | |
| MobiDBLite | 101 | 121 | 21 | - | – | |
| PANTHER | 178 | 392 | 215 | 1.3E-135 | – | |
| PANTHER | 178 | 392 | 215 | 1.3E-135 | – | |
| MobiDBLite | 256 | 281 | 26 | - | – | |
| ProSiteProfiles | 274 | 323 | 50 | 12.049 | ||
| Gene3D | 283 | 331 | 49 | 3.2E-6 | ||
| CDD | 284 | 327 | 44 | 1.68148E-6 | ||
| SUPERFAMILY | 284 | 338 | 55 | 6.15E-11 | ||
| MobiDBLite | 340 | 360 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
Expression pattern of LotjaGi3g1v0081000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…