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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0081600 |
| Transcript ID | LotjaGi3g1v0081600.1 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BTB/POZ domain-containing protein family; TAIR: AT5G48800.1 Phototropic-responsive NPH3 family protein; Swiss-Prot: sp|Q9FKB6|Y5880_ARATH BTB/POZ domain-containing protein At5g48800; TrEMBL-Plants: tr|A0A151QPS9|A0A151QPS9_CAJCA BTB/POZ domain-containing protein family; Found in the gene: LotjaGi3g1v0081600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:9129206..9133412) extracted from Lotus japonicus Gifu genome v1.2.
GTCGGAATGATTTTCTATCGTGTATTTAAACACGCACATTGATATATGTTCTGAGTCGTATAAAATAAGTTATGGAAAGC AAAGTATGACCCACAAGAGAGGCCCATTGCTTTGGAGAATTGCAATCTATGCAATAAGCACCACCTGTTTGACGAAAATG GCCAAAGATCTCTTTCAACAGAAACATCTCCAACTGGGTCTCTGTCTCTTTCTCCACTTCACTACAACCTTAAACCCACT ACTACTTCTTCTACTGTACTTTTATCTTTCCATTCACATTCTCTTGTTCTGTTTCACACTTTCACTCTCTTATTCGTGTC TTTTTTCTCACTCCCCATGGACCGTACCACTGACAAGCAGCAATTTTCCTTGGCCAAAGGTGCCAGGCAAAGATGCAATG AATGGTTTGTTTTCATGCTTTTCTTTTTCTCATGTTAAAGATTTTTGGGTTTTGCATGTCTCTTGTTTTGCTTCACAGAA AGAAAAAAATAAGTATTACTTGAAGGGTGAGTTTCTGTTTTTGTACATGTTGTTTTGTTGTGGCATTCTTATTACTATCA TGGGAATTGAGTAGTTTTTTCCTTTGTTCTGTCTTTTCTGGTATTGCAAACTGGTAATCTATTCTTATAATTATGCTAAA TTAACTTTGGTTCTGCTTAAGATTGTTGTAACTGAACTTTCTTTTTTCTTGTTTTCTCAACTGTTTGCTGGAATGGAATG ATCAATGATTTTATCTCAGAAAATTTATATTCTACTTTATCAATGAACTATTCTTCTTCCTTGTTTGTTCATGGATGGCT TCTTGTTGGTATTTGAATGCTAAAAGTGTGATCTTAATGCCATCTGGTTTATTGTTCTGGATTGTGTTTTCTATTGTGAT TCTGATTTTTCTGTAACTTCTTACTTAATTACTGATATGTATAGCACATAATCTCTAGCAATATTAGTTCATTTTTTTGT TTTTCCTTTATTTCTTTCCTGATTAGGAGATATGTTGATGTTCAACAATTTTTCTTTTCAACCAAAATTTTATCCGTGGG GTCTGTCATCTTAATAATTCAATTAGTTGAGCTGTAATGGTATGGGATTATAAATTGAATTTTATTTTCTTCTTTTGGGT TGGTCCTTTGTGGAATTAATGCAGGTAATATCATTTTGTGAACAAAGTTTATGATTGTGCTTTACATCTGGTACCTACCA TATGATATGGTTACATAACTCAGTTTCACTATAATCACATGTCATTTTCCTCAATCTTTTCTTCTGCTCCTTGTAATTGT TCGAAAAGTTGAAGTGTTGTTTGTGCTTGAAAAGCAGGGACATGTCAGTGTAGGGGAAGAATTGAGGGTGGAATGCGATG TTTACATGCATCTTAATTTCAAATTAATTTTCTAATTGATATTGGTGCCTTTTTGTTTCTGATTGATTGTAACTGTTTTT ATCCTTCTAAGTAAAGGAAAGATCAATTTTCTTATATGCTTATGTGTTCTTTTAAGGACTGTGATGAGTGAGGGACTCTG TATATGAGCTCTTCTCTTCTAATATTTAGTTAAGAATCAAATTGAGCTGTCTTGGATTTCATTAGTGCATGGTTAATAAA AAGAAACGATTTGGTTTTAATGATTCTCCCATTAACCGTTTGTAGGATTTTTCGGGATGTACCAAGTGATATAACTATAG AAGTGAGTGGAATAACATTTTCATTGCACAAGGTAAGTACTTGCCTCATTTAATTTGAGTTTTTCATTATTCTTATTCAT AACAATAACATGTTGATGGCTATGCAGAAGTTTCCTTATGTGATTGTTCTAACTATTGTTTCTTCATATGAAGTTTCCTC TTGTTTCCCGAAGTGGAAGAATTAGGAGGCTAGTTGCTGAACATAGGGATTCTGATATCTCAAGAGTTGAGCTTCTTAAT CTTCCAGGAGGTGCTGAATGCTTTGAGTTGGCTGCCAAATTTTGTTACGGCATCAACTTCGAGATCACATCCACAAATGT TGCGCAGCTATGTTGTGTTTCTGATTACCTAGAAATGTCTGAAGATTTCTCAAAAGACAATCTCGGCTCCCGAGCCGAGG AATATCTTGATAGCATTGTTTGCAAGAATCTTGAAATGTGTGTTGAAGTCTTGCAACAATGTGAAAGCCTGATCCCTCTT GCTGATGAGCTAAAAATAGTTAGCCGCTGCATTGACGCGATAGCTTCAAAAGCTTGCGCGGAGCAAATAGCTTCTAGTTT CTCAAGATTAGAGTATAGCAGCTCAGGGAGGTTGCACATGAGCAGAAATGCCAAAAGTGATGGTGACTGGTGGATTGAAG ATCTTTCTGTTCTTAGAATTGACATGTACCAGAGAGTCATAACAGCCATGAAATGCCGCGGTGTTCGTCCGGAGAGTATC GGCGTTTCACTTGTGAATTACGCGCAGAAGGAACTTACAAAGAAATCCAGCTTGTGGAATCCATCTACCAATGCTAAAGT TGATTCAGATTCCAGTTTACATGAACAGCTTGTGGTTGAGACCATTGTCAGCCTTTTGCCTGTTGAAAAACTCGCTGTTC CGATCAATTTCCTCTTCGGTCTTCTGCGAAGTGCGGTGATGCTTGATTGCGCAATTGCTTCAAGACTTGACCTGGAAAGA AGGATAGGATCACAGCTAGATGTTGCCACTCTTGATGATCTTCTGATTCCGTCTTTCAGGCACGCAGGCGATACCTTATT TGATGTTGACACAGTTCATAGAATTTTGATAAACTTTTTTCAGCAAGATGATAGCGATGAAGACCTAGAAGATGCTTCTC TTTTTGAATCTGATAGTCCTCCTTCTCCTTCCCAAACTGCATTAGTTAAAGTATCAAAATTAGTTGACAACTACCTTGCT GAAATCGCGCCTGATGCAAACTTGAAGCTTTCTAAGTTTTTGGTCATTGCAGAAACCTTGCCGGCACACGCACGCACCGT TCATGATGGCTTATATCGAGCAATTGATATTTACTTAAAAGTATGTTTTGTTATCTTTGCTTCATACATGTGTACAAAGA TTAAGTCGCTATATGTGTTGGTTTTATAATCTTTAAAAAATAGCTTCTCCTAAGAATTGATTTTAGCTGTAGAATCAATC ATAGAAAGACTTCCATACATGCACATAGTATGGTTAAAACAGCCAATTTCTTGTTATACAAGATTTTTATATCATTCATA AACTTCTCTGGCTTAATCAAACATATATATGTGATGTCTGATGTGTATCTATTCTTAAATTCTTCCCTGAGTGATGTCTG CAGGGAAATTTGCAGTTTATACCTGATGCTTTCTGTAAATGTATTTTCAGGCTCATCAAGGTTTGTCAGATTTGGACAAG AAGAAACTTTGCAAAATGATTGATTTTCAAAAGCTTTCTCATGAAGCTGGAGCGCACGCTGCGCAAAATGAGCGCCTTCC TCTCCAGTCAATAGTGCAAGTTCTTTATTTTGAACAACTAAGACTCAGAAACTCTTTGTCCGGCACCTATGGGGAAGATG ACCCCAAGCCAATGCACCAGTCGTGGCGCATAAGTAGCGGTGCACTAAGTGCAGCAATGTCTCCACGAGACAATTACGCG TCACTGAGGCGTGAAAACCGTGAGCTCAAACTTGAGTTGGCTAGACTGAGAATGAGATTAAATGATCTAGAGAGGGAGCA TGTTTGCATGAAGAGGGATATGGCGAAGTCCGCATCGCGTAAATTCATGAGTTCTTTCTCCAAAAAAATCACTAAGCTTA GCATCTTCGGACATGGTTCTTCCAGAGGATCAAGTTCCCCATCCAAAAACTCTCATAGAACAGATTCAAAGGTGATAGAG AGAGTCTGTGCTAGCACAGAATAGGTAAATGTGTAATTGTCATTTTTCTTTTTTTTATCTTTTTTTTATCTTTCATTGAA GTCACTAGGCAACTGTAAGTTATAGTCATGGTGAAATATTCACTACATTTTGTCTTTCCTCCTTTTAGGCCAAGTTTATG TTAGTACAATTAGGAGGCTATACTTGCTTGCAGGTTCAGTTTATGTGGATTGCTGCATTAGCTTTGTTTGTTTGTTATGT TTAAATGTTGACATGAACGTGTAGTTAAACATGTTACAAGTTTTTATTTCCCATCTTTACTTGAAGTACTTTTCCCTCAG AGTAATCTTAGAACTTGACACTAATGGAAAATTTAACACCATATCTG
CDS sequence (LotjaGi3g1v0081600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACCGTACCACTGACAAGCAGCAATTTTCCTTGGCCAAAGGTGCCAGGCAAAGATGCAATGAATGGATTTTTCGGGA TGTACCAAGTGATATAACTATAGAAGTGAGTGGAATAACATTTTCATTGCACAAGTTTCCTCTTGTTTCCCGAAGTGGAA GAATTAGGAGGCTAGTTGCTGAACATAGGGATTCTGATATCTCAAGAGTTGAGCTTCTTAATCTTCCAGGAGGTGCTGAA TGCTTTGAGTTGGCTGCCAAATTTTGTTACGGCATCAACTTCGAGATCACATCCACAAATGTTGCGCAGCTATGTTGTGT TTCTGATTACCTAGAAATGTCTGAAGATTTCTCAAAAGACAATCTCGGCTCCCGAGCCGAGGAATATCTTGATAGCATTG TTTGCAAGAATCTTGAAATGTGTGTTGAAGTCTTGCAACAATGTGAAAGCCTGATCCCTCTTGCTGATGAGCTAAAAATA GTTAGCCGCTGCATTGACGCGATAGCTTCAAAAGCTTGCGCGGAGCAAATAGCTTCTAGTTTCTCAAGATTAGAGTATAG CAGCTCAGGGAGGTTGCACATGAGCAGAAATGCCAAAAGTGATGGTGACTGGTGGATTGAAGATCTTTCTGTTCTTAGAA TTGACATGTACCAGAGAGTCATAACAGCCATGAAATGCCGCGGTGTTCGTCCGGAGAGTATCGGCGTTTCACTTGTGAAT TACGCGCAGAAGGAACTTACAAAGAAATCCAGCTTGTGGAATCCATCTACCAATGCTAAAGTTGATTCAGATTCCAGTTT ACATGAACAGCTTGTGGTTGAGACCATTGTCAGCCTTTTGCCTGTTGAAAAACTCGCTGTTCCGATCAATTTCCTCTTCG GTCTTCTGCGAAGTGCGGTGATGCTTGATTGCGCAATTGCTTCAAGACTTGACCTGGAAAGAAGGATAGGATCACAGCTA GATGTTGCCACTCTTGATGATCTTCTGATTCCGTCTTTCAGGCACGCAGGCGATACCTTATTTGATGTTGACACAGTTCA TAGAATTTTGATAAACTTTTTTCAGCAAGATGATAGCGATGAAGACCTAGAAGATGCTTCTCTTTTTGAATCTGATAGTC CTCCTTCTCCTTCCCAAACTGCATTAGTTAAAGTATCAAAATTAGTTGACAACTACCTTGCTGAAATCGCGCCTGATGCA AACTTGAAGCTTTCTAAGTTTTTGGTCATTGCAGAAACCTTGCCGGCACACGCACGCACCGTTCATGATGGCTTATATCG AGCAATTGATATTTACTTAAAAGCTCATCAAGGTTTGTCAGATTTGGACAAGAAGAAACTTTGCAAAATGATTGATTTTC AAAAGCTTTCTCATGAAGCTGGAGCGCACGCTGCGCAAAATGAGCGCCTTCCTCTCCAGTCAATAGTGCAAGTTCTTTAT TTTGAACAACTAAGACTCAGAAACTCTTTGTCCGGCACCTATGGGGAAGATGACCCCAAGCCAATGCACCAGTCGTGGCG CATAAGTAGCGGTGCACTAAGTGCAGCAATGTCTCCACGAGACAATTACGCGTCACTGAGGCGTGAAAACCGTGAGCTCA AACTTGAGTTGGCTAGACTGAGAATGAGATTAAATGATCTAGAGAGGGAGCATGTTTGCATGAAGAGGGATATGGCGAAG TCCGCATCGCGTAAATTCATGAGTTCTTTCTCCAAAAAAATCACTAAGCTTAGCATCTTCGGACATGGTTCTTCCAGAGG ATCAAGTTCCCCATCCAAAAACTCTCATAGAACAGATTCAAAGGTGATAGAGAGAGTCTGTGCTAGCACAGAATAG
Protein sequence (LotjaGi3g1v0081600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDRTTDKQQFSLAKGARQRCNEWIFRDVPSDITIEVSGITFSLHKFPLVSRSGRIRRLVAEHRDSDISRVELLNLPGGAE CFELAAKFCYGINFEITSTNVAQLCCVSDYLEMSEDFSKDNLGSRAEEYLDSIVCKNLEMCVEVLQQCESLIPLADELKI VSRCIDAIASKACAEQIASSFSRLEYSSSGRLHMSRNAKSDGDWWIEDLSVLRIDMYQRVITAMKCRGVRPESIGVSLVN YAQKELTKKSSLWNPSTNAKVDSDSSLHEQLVVETIVSLLPVEKLAVPINFLFGLLRSAVMLDCAIASRLDLERRIGSQL DVATLDDLLIPSFRHAGDTLFDVDTVHRILINFFQQDDSDEDLEDASLFESDSPPSPSQTALVKVSKLVDNYLAEIAPDA NLKLSKFLVIAETLPAHARTVHDGLYRAIDIYLKAHQGLSDLDKKKLCKMIDFQKLSHEAGAHAAQNERLPLQSIVQVLY FEQLRLRNSLSGTYGEDDPKPMHQSWRISSGALSAAMSPRDNYASLRRENRELKLELARLRMRLNDLEREHVCMKRDMAK SASRKFMSSFSKKITKLSIFGHGSSRGSSSPSKNSHRTDSKVIERVCASTE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 8 | 599 | 592 | 7.8E-300 | ||
| PANTHER | 8 | 599 | 592 | 7.8E-300 | – | |
| SUPERFAMILY | 18 | 115 | 98 | 1.49E-14 | ||
| Gene3D | 21 | 180 | 160 | 4.8E-10 | – | |
| CDD | 27 | 122 | 96 | 1.07697E-35 | – | |
| Pfam | 29 | 114 | 86 | 3.3E-5 | ||
| ProSiteProfiles | 30 | 98 | 69 | 9.765 | ||
| Pfam | 203 | 460 | 258 | 4.8E-92 | ||
| ProSiteProfiles | 203 | 485 | 283 | 91.543 | ||
| Coils | 523 | 557 | 35 | - | – | |
| MobiDBLite | 581 | 611 | 31 | - | – | |
| MobiDBLite | 581 | 596 | 16 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi3g1v0081600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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