Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi3g1v0082700 |
Transcript ID | LotjaGi3g1v0082700.2 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Zein-binding protein; TAIR: AT4G13630.1 zein-binding protein (Protein of unknown function, DUF593); Swiss-Prot: sp|Q9CAC4|MYOB2_ARATH Myosin-binding protein 2; TrEMBL-Plants: tr|A0A0R0KG98|A0A0R0KG98_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0082700 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:9213706..9218115) extracted from Lotus japonicus Gifu genome v1.2.
GATGGAGTTCGGTGGAACCTTGGTGGTTTTGCCTTTGCAATAACTTATTCATTCTTGATTTCTTTATACAAACTTCAAAA TTTCCATGTTATCCTCAAAATTCTTCACTGTTCTTGTAGATTCCTTTCTGGGTTTTTCATCTCTACCCTTTTGACTCTTC AGCCTCAACTTTTGAACCTCCAACCAACTTTGTATCAAATCCCAGTTTCCTTTCTGGGTTTGTAGTTTCATCAAAGCATG ATCTTGGGTTTCTGTTTTGTTTTTGTTTTTGTGTTTTTCTTCAAGTTGTTCTACTACATGCTTTGATTTCAATCTTTTTT TTTTCTTCAACATAGTGTCTCATTCTTTATATGGCTGGTTTTGTTTGTGGATTTTGATATCTGGGTCGGTGAAAAGTTTC AATTTTGCTTGGTGGGTATCTTGTGTACTTGTGAGGGTCATTTGCTCCTTCTGAGTTCTTCAGGGCAAGATGGCTTTGCC GGAAATTCATTCTTGGACTTTAGGGGGATTGGTTGGAGCTTTTGTTGATCTTGCTATAGCTTATTTCTTGCTATGTGGAT CTGCTTTTGCTTTCTTTGCTTACAAATTGTGCATGTTTTTTGGACTTTTCTTGCCTTGCCCATGCAAGGGGAGTTTTGGG TATAGGAATAGCAATTTCTGTGTGCATAAAATGCTGTTTGAGTGGCCTTCAAGGAAGATATGCTCAATTCAAGTGATGGC TGTGAGAAGGTTTCCTTTTGATGTTTTGTGGTTGAAGGGTCATTCATGCAATGCCAATGATAAAATGGTTGCCCAGAAAA TGTTTGATAATAGGCTTGTTGAATTGGAAGATGAGGCATCCTGCAGTTCATATGCAAGCCCAAGATTGGTTTCCTTAGAA AAGGAGAATGGTTATGATGCTAAGGGAAAGAGGGTCATGAGTCTGAAACGAAGATCCGGGATTCGGCGCAGGAGGAGGAG TGGTTATGATTGTGGGAAAATCTCTTCGGTTGTTCCTTCTGATAGTCTTCAATCTGATGTTGCCGTCACTTCCTGTTTGC CATGTGATGGCAGTATAATCAGAGATAGAACCAGTGAAAGAATATATCCTGCTTCAGGGAAAGAAGTTAGTGTACACTGT AAGTGAGAATTTACCAAATCTTCATTCATTCATTCAATGATTTCAATTAAAATGATATATTGTTTATGCGAATTCACAGG CTTCTAATATATGCTATACTAGGCTAGCTCGCTCAGCATCTTGTGATCATAACGACAGATGATTTTTCTGAAGTTTCAAT GTGTAATGTTAGAAGTATAATAGAAATTCACTCATGTGTCTTCACAGTTCACACAATGGCTTAACTTTTGGATAGTTAGT TTATGACATGGTATTACAACCTCTATAACCCCGTGGTCTAGAATTCAATCATTGTTGCCCCCAATCATCCTAATAAAAAG AGTTGAATTTCAGCAGAGTACGTGGATAGTGTTCGATCATTGCTGCCACTAATTATTCTGATAAAAATAGTTGAATTTCA GCACAAGTTAGAAGAGTCTGTGCATTGTCCACGCTGCAAGCCAAATGAGCTATTGCATGAGGAGGCATGTTAGAAGTATA ATATAAAATCATCCATGTCGCTTCACCCAACATCTTAAGCTCTTAGGATTTTGGTTCATGACGAATAGCTTTGAATCTTA CATTCTTATTGAATACCTATACTATATTTCTATTATTTTATGCACGCTGCTGAATTTTGGCTTTTAACTTCCCTGTATTT TTCCATCCTTCTATTTTTAGACGTTGAAGATGCCCAAAGTGGTCATGATTTGGATGAAAAGACCTGTCACAGTTATGAAT TTAATGGATCAATAGTTGATAGTCCAGAACAGGACAAATATTCATCCTCATTGGAACACTACATGAGTAATATGCAAGAC AATTTCCAGATTATTGGAAATGAAGGGGACCGTATCAAGATGTTGGAAAATGCACTTAAAGAAGAGAAAGCTGCCTATGC TGCTCTATACCAAGAGCTAGAGAAGGAGAGAGCTGCATCTGCTAGTGCTGCTGATGAAGCCATGGCTATGATATCGCGTC TGCAAGAGGAGAAGGCATCCATGGAAATGGAAATGAGGCAATACCAGAGGATGATAGAAGAAAGAGATGCTTATGAGGAA GAAGAGATGAATATTCTTCAAGAGATCCTTATAAGAAGGGAAAGGGAGTATCACTCTCTGGAAAAGGAACTTGAATCTTA TAGGCAGACAAATTCGAATGGAAGGGATGGCAGGACGAAGTTGCAGCTCGATGGACAAAGGCTACCAATTTCAGTTGAAA GATATGAAGATCCACCACAGATTGAAAGCACCATATCAATTGTTAAGAAAGATGAAATAGTAAACATTTCATCAAATTAC ATGGTTGCTGAGGATTATATCAATACAGAAGATGGAGAAGAGCTGGAGAAAAACACAGAGCGCAAGGGTCAAGGGCATGA AGATCTGCATAGTTGCTTTTATGATACTGAACCTGATGTACTTGATGTCCATGTTGTTGATGACAACATAGAACTTAGGG AAGAGGAAAATGAAAAGTTACGTAGTTATTCATCTGGTACTCTTTCAAATGAACATGATGTGAGTATTGATGGTCCAGCT AGTCAGTTATCTATGTTCTCTAACTCAAGATGCAAAACTTTGCCTTCTGATTCTGGAAGTGATTCTTCATGTGCAGTTCA TAATGAAAAGTTAAAGATTGACAATGAGATTGAAATTCTCGGAGAAAGGCTAAGGATGGTAAAACATGAAAAAGAAAAAT TAACTTTTTTCGCGGAGAACAGAGAAAGTGAAAAAGATCGTTTGAAGCTTCTGGAGGAGATACCGAACCATGTTCAACAA ATTAAACAGTTAAGGAACCCTGTACGTGGGACTTCCTTGCCCCCTTCATCAGCAAAGGTATAACTCACCCCTTCTTATTT ACAAAGCTTTAATTTACTATTGAAATTAAGTTATTCTCTAGACAAGTGTATGTGGTGATTGTAGGTTATGTGCAACAATT CTTAAGTCATGATCATCTATTGTTTTTCACCAAATTTCATGTGCTAATTACACTTCTTTCTAGCATATATTGGTTTCTTA TGCTTCAATTATATGAGACAAAGGACAAAGATTAGCTTGAATTTGACTTATCTCCTCAATTACAAATTATTATATGGACA GAATCAAGGTACTGGTTCTCGTGGTTGAAATAGACTTTCTTATATTGTTTATAGAGCTTTTAAAAGCTCAAATTCACGTA TTTTTTTTGGACTTGTTTGAAGAGTACATTCGACGTAAGCTTAAGGAGTCTAACAATCTGATCTAAAAACACTTAACTTT GGTAACCCCAGGAACTTCTGTTTTACTTTCTATATAATGAACCAGTGTCTGTAGTTTTAAACTTATCATGATTTAACTGC AAGCAATTAGGCAGATTTCTTACTCTTGTAGTAAGGATGAAATGCTACCTTGCCCGTCCGTATTGTGATGTCTGAGGAAC TATCTTATTACATACTAACGTTATCAAAGTGAGTTATCATACTAAGAGCTCGTTTGGATACAGGCTTATTAGAGGCTTAT ATACTATAAAGATCACTAGATAAGCTTTAATAAGTGCTCTTTGGTTTTGCATATCTCCATTGCCTAACTTTATGGCTGTA TCTCTTAAATTACCGTGTCATGTAGTGTATCTGTAACTTTTCCTGAGCATAATGCTCACAGAAGGAAAACATCAAAACTC AAAAAGCTTAGTCATGAAGGTCCAACTTGAAACCTGCGGTTACTCCCAATTGTGAAAGTTTTGCTTGAATTGATATTTTC TTGCATATCAATATTTCTGAAACAGATATTGTTTGGTGCTAATTCAACATTATAACATACTTAATGGTATATTTCTTGTA TTTGTCACTGTTGTTTAGCTTAGTGACCGGTCATAATGTAGCTCTTGGTCATTGTTATGTTGCTTTATGGCCAATGCTGA TAATATCTATTTCTTCTCAGGCAAGCTTGAAGAAAAGTGCGTCTTGGGAGACATGTGAAAGCTGCTAAATCATGTAGAGT TGCACGTTTTCAACTGTCATAAGCTTTGTCCTTGGCAACTTGTAAATGGAAAATACCTCTGGTAGCCTCTAGAAATTCAC CACCATTTCCTTTACCTTGGTACATGTTTTAGTTATCTAAATAAACCTTATCATAGTCCACTAGGTTCAATATGTAGTCA AAGCAGTTTTGAAGCCTTGAAGGTACATGGGTTATGATGTGTGTTTGCCTTAGTGGGATATGGCACATGGGTTATGAACT GTAAGTAACTGCATATCCTTTTCCTCCATGTTCTTGTAGCTTGAGGTATCGTGTCTATATTTGATAGAGAACAGCTTATA AATGAAATTA
CDS sequence (LotjaGi3g1v0082700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTTGCCGGAAATTCATTCTTGGACTTTAGGGGGATTGGTTGGAGCTTTTGTTGATCTTGCTATAGCTTATTTCTT GCTATGTGGATCTGCTTTTGCTTTCTTTGCTTACAAATTGTGCATGTTTTTTGGACTTTTCTTGCCTTGCCCATGCAAGG GGAGTTTTGGGTATAGGAATAGCAATTTCTGTGTGCATAAAATGCTGTTTGAGTGGCCTTCAAGGAAGATATGCTCAATT CAAGTGATGGCTGTGAGAAGGTTTCCTTTTGATGTTTTGTGGTTGAAGGGTCATTCATGCAATGCCAATGATAAAATGGT TGCCCAGAAAATGTTTGATAATAGGCTTGTTGAATTGGAAGATGAGGCATCCTGCAGTTCATATGCAAGCCCAAGATTGG TTTCCTTAGAAAAGGAGAATGGTTATGATGCTAAGGGAAAGAGGGTCATGAGTCTGAAACGAAGATCCGGGATTCGGCGC AGGAGGAGGAGTGGTTATGATTGTGGGAAAATCTCTTCGGTTGTTCCTTCTGATAGTCTTCAATCTGATGTTGCCGTCAC TTCCTGTTTGCCATGTGATGGCAGTATAATCAGAGATAGAACCAGTGAAAGAATATATCCTGCTTCAGGGAAAGAAGTTA GTGTACACTACGTTGAAGATGCCCAAAGTGGTCATGATTTGGATGAAAAGACCTGTCACAGTTATGAATTTAATGGATCA ATAGTTGATAGTCCAGAACAGGACAAATATTCATCCTCATTGGAACACTACATGAGTAATATGCAAGACAATTTCCAGAT TATTGGAAATGAAGGGGACCGTATCAAGATGTTGGAAAATGCACTTAAAGAAGAGAAAGCTGCCTATGCTGCTCTATACC AAGAGCTAGAGAAGGAGAGAGCTGCATCTGCTAGTGCTGCTGATGAAGCCATGGCTATGATATCGCGTCTGCAAGAGGAG AAGGCATCCATGGAAATGGAAATGAGGCAATACCAGAGGATGATAGAAGAAAGAGATGCTTATGAGGAAGAAGAGATGAA TATTCTTCAAGAGATCCTTATAAGAAGGGAAAGGGAGTATCACTCTCTGGAAAAGGAACTTGAATCTTATAGGCAGACAA ATTCGAATGGAAGGGATGGCAGGACGAAGTTGCAGCTCGATGGACAAAGGCTACCAATTTCAGTTGAAAGATATGAAGAT CCACCACAGATTGAAAGCACCATATCAATTGTTAAGAAAGATGAAATAGTAAACATTTCATCAAATTACATGGTTGCTGA GGATTATATCAATACAGAAGATGGAGAAGAGCTGGAGAAAAACACAGAGCGCAAGGGTCAAGGGCATGAAGATCTGCATA GTTGCTTTTATGATACTGAACCTGATGTACTTGATGTCCATGTTGTTGATGACAACATAGAACTTAGGGAAGAGGAAAAT GAAAAGTTACGTAGTTATTCATCTGGTACTCTTTCAAATGAACATGATTTCATAATGAAAAGTTAA
Protein sequence (LotjaGi3g1v0082700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MALPEIHSWTLGGLVGAFVDLAIAYFLLCGSAFAFFAYKLCMFFGLFLPCPCKGSFGYRNSNFCVHKMLFEWPSRKICSI QVMAVRRFPFDVLWLKGHSCNANDKMVAQKMFDNRLVELEDEASCSSYASPRLVSLEKENGYDAKGKRVMSLKRRSGIRR RRRSGYDCGKISSVVPSDSLQSDVAVTSCLPCDGSIIRDRTSERIYPASGKEVSVHYVEDAQSGHDLDEKTCHSYEFNGS IVDSPEQDKYSSSLEHYMSNMQDNFQIIGNEGDRIKMLENALKEEKAAYAALYQELEKERAASASAADEAMAMISRLQEE KASMEMEMRQYQRMIEERDAYEEEEMNILQEILIRREREYHSLEKELESYRQTNSNGRDGRTKLQLDGQRLPISVERYED PPQIESTISIVKKDEIVNISSNYMVAEDYINTEDGEELEKNTERKGQGHEDLHSCFYDTEPDVLDVHVVDDNIELREEEN EKLRSYSSGTLSNEHDFIMKS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Phobius | 1 | 11 | 11 | - | – | |
PANTHER | 1 | 481 | 481 | 2.9E-164 | – | |
PANTHER | 1 | 481 | 481 | 2.9E-164 | – | |
Phobius | 12 | 38 | 27 | - | – | |
TMHMM | 13 | 35 | 23 | - | – | |
Phobius | 39 | 501 | 463 | - | – | |
ProSiteProfiles | 273 | 371 | 99 | 20.152 | ||
Coils | 275 | 302 | 28 | - | – | |
Pfam | 277 | 367 | 91 | 1.6E-30 | ||
Coils | 307 | 373 | 67 | - | – | |
MobiDBLite | 480 | 501 | 22 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0082700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…