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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0089100 |
| Transcript ID | LotjaGi3g1v0089100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Peptidylprolyl isomerase; TAIR: AT5G48580.1 FK506- and rapamycin-binding protein 15 kD-2; Swiss-Prot: sp|Q41649|FKB15_VICFA FK506-binding protein 2; TrEMBL-Plants: tr|I3SJ25|I3SJ25_LOTJA Peptidylprolyl isomerase; Found in the gene: LotjaGi3g1v0089100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:10070835..10077471) extracted from Lotus japonicus Gifu genome v1.2.
TAAATGGTGAGGCTCGCAAATTGAAGACAAACCTGAGACGAAGGTGGGGGAGGCAGTGTAGGGGTAGCGCGGTGGTTTAG ACTAAGGTTTGTCGCTGAGGCGGCACTGAGGGCTGGAGAAGAAGGCTTGGAGTTGGAACAACACAAGTGATCTCCGAGAT GCTTTATCCTGTGGAGAGTATCAATCTCCGTGCTGCCGTGTGCGGCACCCCGTCGACAACATTAAAGAGTTAGTTGAGGT TGGGATGGGTGAATGAATATACTATTTTATTTTATTTATTATATTTTTCTGTTTTCTTTTAATTTTAATTTTAATTTTAA TTTAGAGGTATGGTCTTTTGAGGTTGGGCTGGTGGGCAGGTATGGTCTGTTGTTTATTACAGGATTGTGGGGTGTTTGGT GTTCGCGGAACAACCGGATTTTTTATGTGAGTCTATGTGAGCCTGTGGATTGTGTAGATGACCGTCCACAATGTTAGGCA TGATTACAATGATTTTGTGCGGTTTTGTCAGGGGGATCAACAAGGTTGGTCCAACTCTTGGTGATGCGTGAGAACTTCAT CGCTAGTGTTTCTCAAACTAATCAAAGATGAAAGTTTTTGCGAGGATTAGAATACATGGGTGGGGTGTGTTTTCCAGAAC GCTAGTGGTTATTGAGCTTTTTAAGCTTTGAGATTGGTGAGTCATCGTTCATAGTGGAGGCGCGAGCAATGAGGGATGAC CTCAACGTTGCTTGGAATTGGGGTTACTGTCAAGTCATTCGTGAAACAGATTGTAAGGACCTTGTAGAGGTTCTTGAGCA TGCAGAGGAAGTGAATCTTCATGTAGAAACTCTAGTGTTGTGGTAAATTTTGGAACTTTTTTCCCGGAGTTGGAGGGTTA GTGTTGCTTGGATACGTCACGGTGGAAATGGTGTGACAGATTTGATTGTTAGGAAAGGAGCTTGTAGTCCCTGACGGCTA TCTGAGTGGTTGATCGTCTTGACGTAGAGCTAGAAACAATCCTGTTGAAGAGTTAGTATTTTTTTCATCTTTTATTAGTT TTTCGATGGAGAAAAAACATAAAATCCCAACCCGTTCGAACCGATTTCTAACCGTGACAATAAAATCTTTTTTCTAATTA AAAAAAGGCTTAATTGCACTTTTGCTCCCTGATCTTTCACCTTTGTGCGATTTACCTCCCTCATCTTTAAAATGAGCGAA TTCCCTCCCTCTTCTATTAATATGTGTGATTTAGGCCCTTCCGTTAGTTAGCCGTCCAATTGCTAACGGTAGTTGCTATT TTCACCCCCCTTTTACTAACCACACCCCCTTATCAGAAATAAAAATAAAAAAATAAAAAATAAATTAAATAAAATTAATA GAAAATAAAAAAAACTATAAATTAAAAAAAACTGAAAAAATATTTTTATAAAAATCAAAGAAAAAATAATAAAATAAATG AAATAAGTTAAATACAATTAATAGAAAATGAAAAAATATTTTTATAAAATCAAAGAAAAAACTGAATTTTTTTTTATAAA AATCAAAGAAAAAAATGTTTTTATAAAGTCAAAGAAAATAACATATTTTTTTTAATTGAAGATAGAAATTTAAAAATAAA ATAAAAGAAGAATTTGTTTCTATTTGCACCACCTACACTAAATTAAAAATAATTATTCTTTTATTTTATTTTTAAATTTC TATCTTCAATTAAAAAAAATATTTTATTTTCTTTGAATTTATAAAAACATTTTTTCTTTGATTTTTATAAAAATATTTTT TTCAGCTTTTTTTTTTATTTTATAAAAATGTTTTTTCATTTTCTATTATTTGTATTTAACTTATTTCATTTATTTTATTA TTTTTTCTTTGATTTTTATAAAAATATTTTTTTTCAGTTTTTTTTTTATTTTCTATTAATTGTATTTAATTTATTTAATT TATTTCATTTATTTTTTTATTTTTTACCTTAATTGCACTTTTGCCCCCTGATCTTTCACCTTTGTGCAATTTACCTCCTT TTTTATTTTTATTTTTATTTTTATTTCTGATATGGGGGTGTGGTTAGTAAAAGGGAGGGTGAAAATAGCAACCGCCGTTA GTAATTGGACGGCTAACTAACGGAAGGGCCTAAATCGCACATATTAATAGAAGAGGGAGGGAATTCGCTCATTTTAAAGA TGAGGGAGGTAAATCGCACAAAGGTGAAAGATCAGGGAGCAAAAGTGCAATTAAGCCTTAAAAAAAAAACTGTGACACAA AAATGTAATATACCCGACCCGATTGAACCGCGTACCGTTCCAATGTAGTGATGCTATTTAACTGACTGAGACACAGTGCA TAAGCTTGGTGTGTAGTGATGGCAAATTTCAGCTATTCAATGAAGGCATTTTCAATTTTCCTCTTCTTCCTCCTCGCTTC AGCATTAGGTATTGTACCCTCGCGTTCTTCACGATTCTTTGATCCCATTTTCACAAAACACATCGCATCACATCACATCA CATCAATTTCTCTCTATATGCGTGATTATTTCAGATCTCGTTGATTTTTCCCTTCAATTGATCAATATCTGTTCTGTTTT TTTGTTTGTGCGCATTAGTTTCTGCGAAGAAAACTGCTGATGTAACGGAGTTGCAGATCGGTGTGAAGGTAACCTTTTCT CTTGATTCAGAACTGTATCTTCTATTTCATTTTTAGGTTTTATACAAATTGCATTTCTTTTTGTAATACTTTATTTCCTT GGTATTTATTATTTAATTTGGTATCGGTATCAGGTCGCGTTGATGATTCCAATTTGTTGGGAAATGTTTTACTGTTTTGT AGCTGTTAGATAGAATAACCCCTTTGGGAAAACGGCTTAATTAAGCGCAAAATGACCATAAGCGCTTATTCATAAGTTAA TAAGCTATATATAAGCATAAGCTCTTTTCATAATCTATCCTGAGTAGCTTATGAAAATAAGCTCAAAACAGCTACCAAAA GCTGTTTGCATAATATCTCCCAAACACTAGTACAAGCGCTTATGCTATCAGATAAGCTCTCCCAAATGGGGCCTAAGCAG ATTGTTAAAAAGCACATAAATGTAAATGCGGGGTAATTTGTTCTATAGATTAAAACTGGTAAAGAAAAAATTATATATCT TTTCCCTAGCAATGACACAACATTCTTAATTTTCATCAATATAATATTGTTACTTATCCATCTGCATTGTGAAAGCTATA ATACAGTGAAGCTGGGATTTATGTCTTCTTTTTTGCTTACTTATGATTTATGTTTTCTGTCTCATTGCAGTATAAACCTA CATCATGTGAAGTTCAGGCACACAAAGGTGATAAAGTCAAAGTACACTATCGGGTGAGTAATTTATCAGGTTTCTGTTCT CTTCCATGAAGGTAAGCTTAAGAAATAAGCCCAAGATATGTTTGGGAGAGGGAAGGGAAGAGGATGGGAGACTAAGAAGC TAAGTAATAACTAATACGTTTCTTTCACTTTGTTTGGATGATTAAAACCCCCCAAAACGTGGAAAGTTTAAAATGTTCAC ATTGAGGGAATATCAAACAAAGTGAGATATGTACGTAAAAACCTTTTTATTTTCTAACTTATCGTGTATTCTCCTCTATT TTAACATACACTAAATATCTATCATATGAATCATACACAACACAACATGGACAAATTGAATATAAATGACAATTTTTGTA AAGAACTCACATCCCTTGTGTTTTACGGAAGTTATACTGACCTCACTTACATTTTGAAAACCTACACAAACATAAGTAGC TCCTAACTGACTCTACAAACTAACCAACACATTACACATCTGTTTAACTAACAGTTCACATACTCTAACAAAGGTCTCTG TAATTTACTGATTTACTCTCAAAATCATATAAATACATAAAATATTGGTAGATAACTATATTAAATTATGAAAACATAAA TAACTTAAGATGGCTAAAACTTAAAACCTGTATTTTTGAATTAAAGGTGAGAGTTTATAACAGTTGTCTAACTTTGAGAT ATTTATCTATTTTTACAAGAGTTTTTTTAGTGCTTCGACCCATGGAAGACTCAGACACTGACTCTGCTCCTTTCTCTGAG CACGAACTCTCCATAGATTTTACTGTACTAATTTCTGTACTTAAAGTATTGGATGGGATTACTTGTAGTTATAACCTTAT TCTAGTTAAAGAGTGGCTATATGTTTGAAGAAGTTAATAGGAATTGCAGCTGCTAAAATCTTCTTAATCTTGAAGTTCTG TGAGATGGATAAAACAGAAGTAGCAGACAATCAAATACCGCTTGTTGTTTAATTGGGTATCCTTGTTCTGTTATGTCTTT AGTGATCAACAGCAACAACATGGGAAGGCTTTTAAGCTACATGCTTTAAGGGCTTTTACATCTCACATATTTGTTCATGT AATGAGGAACCATGCTTTAGTTAATCTTTTGTCTATCATGTTCTTACATATTCTTTTGCAGGGAAAACTCACTGATGGAA CTGTTTTCGATTCTAGCTTTGAAAGAAATAGTCCAATCGATTTTGAACTTGGCAGTGGTCAAGTGATAAAGGGTATGTTG TGCATAAATAACTTTAGTTTTATGAATTTCTGGTTTCATTACCAATAAAGGTGATAATAAACTAGCTACTGTATTTTCTT TCTGAATTACTGAATGATAGCTAATAGGTTAGAGGGTAGCTAAATTAATAGAAAGTGAGAAAGTATGCTGCAGATTGTCC AGAAATTATGTCATGTCACAGTAGCATAGGGGAACAAGTTGTAGAAGTTGAGAACATCGCTTTCTTGAATTTCTCACCCG CCCAGGAAAATGGTTTATTTTGTAACATGTAAATTGGATATTTCAATTTATTTTAATTCTATTACTGGAACTTCAATTAG TTTGGCCCTACATGTTACATTTGCCAACTTAAGAAACAATTAGTCAATCACATATGCTACCAGCCTTGCTGGCCCTTCAA TTTATTTCATGCATATTGAATCTCGAATATGCTCAAAAGGGTTCTGATACTTGTAGGGGGTGTACGATCTATATAGTACT ATTACTGGATATCACCTTGTAGGGTGTGTATAAAGCTTGTATTTCATAAATATCACCTTATAGTTTATATTTTATCTCCA CATCTTCTCCTTCTAGTATCTTGTTAGCACTACATCAATAGAAAAGAGAATCCAGCTGATAATTGCATTGTAGACCAACT CCAGGCCTATAAGTCATTACACCCTTATTTCCTTATATTTTATGTGCTTTTTACCAATTTTCCTAGCCAAATATAGTGGG TACATGCATGCATGGTTGTATTTATACAAGCGTGCAACTATTTAAGATGCAATTTTACTGCAAACTATTGGTTTATGGTT GATGGAAGATATTGAGGATTCATGATCACTGCCTATCTTTGCAGGGTGGGACCAAGGATTACTAGGAATGTGTTTGGGTG AGAAGCGTAAGCTCAAAATACCAGCAAAACTTGGCTATGGGGAGCAAGGTTCCCCACCCACTATTCCAGGTAATTTATTT TATGATATTGACAATGATAGTAATGTTCAAATGTCAAAATGTTTTTCTAGTTAGTAAAATTATGGTCTGACCACTAGACA ATGATCTGTTCGCCCGTTTTCTTCAACTGCGGATTGGTATATACTCTGCTAAAAGAGGATCTGATCTTGGTCCGAGATAA ATTTTTGCATGACTGGACTACATTAGCTGTTCTGATTCTGGTTATCTCCTTTAGGATTTTTGTTTTATATCATATTAATT CCATAAATTTTTTAAAGCAATTCTATTATATGAAAAAGAAATGCATAAAAAATGGTATGAGATAATTGCATTTCCATGGA TGTTAAAATTTTTAGATTGTATTGCTCTCTGCATTTTATAATAAGCCAACTAGCTATATTATATTATTTATATAAGCTTA TATATGTCTTTGAACTTACAGGTGGTGCAACACTGGTATTTGACACTGAGCTTGTGGGAGTGAACGACAAAAGTCTTCAC GAAGAGACACCAGACTCCGAACTGTAGACAATTCAAAACTAATAGAATACTAGACTTTTGGTGATCTTTGTTAGCTTTTT CTTTTAGTCCTCAATAATGCTTTCATCTCCAGGGATTCAGTGTTTTAATTCTGAGGCTAATGTAGAAGGATTTAGCTGGT TTACTGTATCAGTTAAATACATCTCTATCTGGTATTTTTTGGCGATTATAATATTTTGAGAATTCAGTTTTTGTCTTTGC CATTTGCGCCATTATGTTTTGACCTCTTAATTGTTTGCAATCGAGATGGCTATAGGTTGCTTGATAATCCCTTGTGCTGA ACATGTTAACACAATCAATTAAAAAGTACAATATACAAAAGCATATAAATTCGTGGATTTATGACGAGGAATAGTATTAA CATTTTTTTAACATGTTTTTCTTTTTGACGAACACTTAACGTGCTTTTCTCTAATTGCTGTTTTTTACTTGTTGAGATTA TGTAAATAGTGTGTTTGGATAATGGATTTTAATGAGGTACTGTATTTGTTGAGGGGATTATAAATGTATTTTAATAGTGT GTTGGGGGGAATATTTTGAATCTTCCCAAGATTTTTATCGGCTAATTGTACTCAAAACATAGTATTTGAAATTTCAC
CDS sequence (LotjaGi3g1v0089100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAAATTTCAGCTATTCAATGAAGGCATTTTCAATTTTCCTCTTCTTCCTCCTCGCTTCAGCATTAGTTTCTGCGAA GAAAACTGCTGATGTAACGGAGTTGCAGATCGGTGTGAAGTATAAACCTACATCATGTGAAGTTCAGGCACACAAAGGTG ATAAAGTCAAAGTACACTATCGGGGAAAACTCACTGATGGAACTGTTTTCGATTCTAGCTTTGAAAGAAATAGTCCAATC GATTTTGAACTTGGCAGTGGTCAAGTGATAAAGGGGTGGGACCAAGGATTACTAGGAATGTGTTTGGGTGAGAAGCGTAA GCTCAAAATACCAGCAAAACTTGGCTATGGGGAGCAAGGTTCCCCACCCACTATTCCAGGTGGTGCAACACTGGTATTTG ACACTGAGCTTGTGGGAGTGAACGACAAAAGTCTTCACGAAGAGACACCAGACTCCGAACTGTAG
Protein sequence (LotjaGi3g1v0089100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MANFSYSMKAFSIFLFFLLASALVSAKKTADVTELQIGVKYKPTSCEVQAHKGDKVKVHYRGKLTDGTVFDSSFERNSPI DFELGSGQVIKGWDQGLLGMCLGEKRKLKIPAKLGYGEQGSPPTIPGGATLVFDTELVGVNDKSLHEETPDSEL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 26 | 26 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 26 | 26 | - | – | |
| SignalP_EUK | 1 | 26 | 26 | - | – | |
| Phobius | 1 | 9 | 9 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 32 | 32 | - | – | |
| TMHMM | 4 | 26 | 23 | - | – | |
| PANTHER | 9 | 148 | 140 | 3.9E-75 | – | |
| PANTHER | 9 | 148 | 140 | 3.9E-75 | – | |
| Phobius | 10 | 21 | 12 | - | – | |
| Gene3D | 20 | 152 | 133 | 7.3E-44 | – | |
| Phobius | 22 | 26 | 5 | - | – | |
| Phobius | 27 | 154 | 128 | - | – | |
| SUPERFAMILY | 34 | 145 | 112 | 2.36E-42 | – | |
| Pfam | 47 | 138 | 92 | 1.5E-35 | ||
| ProSiteProfiles | 53 | 141 | 89 | 31.058 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Peptidyl-prolyl cis-trans isomerase activity | Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0). |
Expression pattern of LotjaGi3g1v0089100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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