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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0097100 |
| Transcript ID | LotjaGi3g1v0097100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | basic helix-loop-helix (bHLH) DNA-binding superfamily protein; TAIR: AT3G20640.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Swiss-Prot: sp|Q8GXT3|BH123_ARATH Transcription factor bHLH123; TrEMBL-Plants: tr|V7AJT6|V7AJT6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0097100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:12131617..12135837) extracted from Lotus japonicus Gifu genome v1.2.
CCACTGTCTAATCAATCACCCCCTGAATTGTCAAAGGCGTCAACCATATTCCAACTAGTCTCTCACTCACTGTTCCCCTT CCCTCACAACACAACAACATGATTTTTCTCTCTTCATCTCCCAATATAAATACTAACATGTTTTGAACCGTTTCCCATTC ATTCATTTCCACTAGCCTCTCATAACCCCAAATAGATCTTCAACACACTGAATTCTGATGCACCCAAACATCACTAGCTC ACAACATCAACTGATCTAGCAAACATACTTTCATGTATAGTTGACAGGCTGAAGCAAACAACACCAACAACAAAAAAATC AACATCAACTTGTACAACAACAACATCAACCATGGCAGATGATCAGTTTCAAGCTAGTGGAAACTGGTGGGAATCAGCAA GAAACGTGAGATTTGAAAGTGGGGAATCACAGTCTTCATCTTCTGGTCTCACCAACTTTGGTGGCTGGCAACAACAACAG CATCATCATCATGATAACACCATTTCTGCCTCTGTCAGTAATTCCTCTGTGGTTTTCCATGATTCTCAGAAGCTTCAACC TCCAGATTCTGCAGCCACTTCTGCCACCAACGACCCCAACTTGCACATGATGATGGGTTTGGGCCTTTCATCTCGAGCCA TGGATTGGAATCAAGCATCTTTGCTGTAAGTGTCGTCTGTGTCAAGACAAGGACATGAAAAACACACACCAAAAGTAGAA AAAAAAAGTGTTGGATCTTTCATTTTCTCTCTTTCTTTTCCATCATTCTCTCTTAGCAGAATAGAATAATCAATAATCAA CCCCCATGATCAAAAGATTGTACTTTGTAATGCTTTTTCTTGTTTGATGCTTGTGATATAGACGAGGCAGCGAGAAGGCT TCAGAGGGAAGTTTCAGGTCCATGCTGCAAGAGAATTCAAGCCCCAACTTTCAGCAAGAAACTGAGGGTGTTGGTGTTGG TGTTGGATTGTCTCAAGTTCATTGGAGACCAGAAAAATTGTTCACTGCAGACTCTTCTAGCAATGATTTCAAGCAAGTTG TGAACAGGGGTTTCTCTTTGGATCAGACACAGTTTAGTCCTCAATATAGCTCTGGAGACAGTAATGTGACAAGCCAAAGT TTGCCTTGTAACTTTCAGATTGATCATTCCTATGGGAACTCTTCAATATTACAAGGACTATTAGGACCTGATCAAAGCAA TAATCATCAACAACCCCAGCAAGGTTCATTTGAGAATCGTCCCATGAATAATTTTCCATACTCACCAAGCTATGGCTTCA ATAACTCCAATAATGAGTTAGTTCCTTCTTGGTCTAAAGTTCCTCAATTCTTAAGAGCTTCACCTCCCAAACAACCACAA GCGAATAACCAGTTGCATTTTACCAACAACGCTCCCTTTTGGAACGCTTCTGAGGCTCCTATTAAGGATGCTCGATCCAG CTTCTTCCCTTCTTTGCAATCCCCATTTCCTACACCAAGTTTTGATACACAATCAAAGGTATCATCACATGAAATTTTAG CATGCATAGATATAGATGTAAATGCCTTGATGTGTACAGCTTATGGTTTTGGTGATCAGTAATGAGTGCAGACATACATC AAATATAGCATTTATTACTTCTTTGTCTTCTCTTCCTTTCTTTACACACTCAAACAGTGCTGACATCCAATTTTTCTTTC TATGTCTCTCTTCTTTTCACATCCTATCATATATCATATGTATTACTTCTTTGTCTTTCCTTTTTCTCTTGGATGTCTGT TGCGTGTATGCACTATATGGATGTCTATGAATTGTTTTCTAAATGTTATGTTAGGGCTGAAATGAAGAAACACTAGAGCA TTTGAGGTCTAAAACTTTTTCACGGTTTTGCAGAATATATCTGAAGTAAGGGACTCAAGTGCTGTGGTGAAGAAAAGTGG GAGTGAGCCAGCTCCAAAAAGGTCCAGGAATGAAACCCCATCACCTTTGCCAGCTTTTAAGGTACAATAAGTGCAACTGA CCTTTTAAAACAAGAATGAAAGCTTTAAACTTTTTATCTTTAATCATCTCTCTTTATTCTTTTTCAGTTTTCTACATACT TTTATAATTTTCAGTTTTTGAGTCCATAAACATGTATAGATATGAACCTATACTGTATTTCTTCTCTACTCAGGTGAGAA AAGAGAAGATGGGGGACAGAATTACTGCACTCCAACAATTAGTTTCACCTTTTGGAAAGGTGAGCTTCTGATAAAATGAT CTAGTCTCTTTCCTCTATGTAGTTATGATAAATAGGAAAGTAGAAAAAAAATGATAGCAAGCATGATTATACTAATGCTG TTTATTTGAATTTTGGTTTAAAATCTGGTTGCTATATACTGTGTCAGACTGATACAGCCTCAGTGCTCTCTGAAGCCATT GAGTATATCAAGTTTCTCCATGAACAAGTGACTGTAAGTTCCATTTCACATTGGTTTATTGTTATTTATTGTGTTTTTAA TAACAGTTCAACATTCATATAAATTTTAAAAGAAGAATTTTGTTCACCTCTTTAACTTAAAATGTATGCTAACGTCCGTT CACACCGGTGCAAACAATGCAAACAGATGTCCAAATATAACCTGAAAAACTTTAAAACTATTAGCCAAATTTTCATCTTA TTTATTTTCTCTTTTGAATAGGTTTTAAGCACCCCATATATGAAAAGTGGAGCTCCAATACAGCATCAACAGGTAATATA TATGCACATACATGTTGTATTTCCTTCTCTCACATAAAAGAAATTAAAGGCTTCAGAAGAAATTTGGCTTTAGAATGTTA GAAAAATTTCCAAATATGCACTAATTTATGTTGATGACTTCCAATTTTCATAAGTTATTATTAGAATATGGATTATGGAT AACTCTGCTCTAATAGTTAATTTAGGAGTGATGGTTGTTTTACACTTTATAAGGATTATTTTGGCTCTAGTTAATGTGAA TACGAGACTACTCAACCGTTATATTTATAATATGTCTGGTCATATATTGCAGAATTCTGGTAAATCCAAGGAAGCTGAGG GTCCAAAGCAGGATCTAAGAAGCCGAGGGCTATGTTTGGTGCCAGTGTCTAGTACATTCCCAGTGACTCATGAACCAACA GTTGAATATTGGACACCAACATTTGGAGGCACTTACAGATAAATTAATGGGGAAAAAAAAGAGTGGCACGGAACCAATAC TCAGCAACTAGGAGATGTCTAATCAAAAGCCTGGCCAAGTTGGGAATGATAAGATGATAGAAAAGAGAAACAGGAGAAAG GACACACAAGACCACATAAATGTGTAAAGTTAGTTAGGCTCTGCTTGGATGGAAAGGATAATAAAATAAGAGAGGAGATG GTAATTGTGTTTAAAGAGGAAGAAGAAAGGGAAATGACCCTTTAAAAGAAAAGCCATAGATGGACCAATTACAAGCAGAA TGGAGCATGGTTTTTGGCCAATTTTGGGGACCATTGGAGCACATTTTTAAGTTGTTGTAATAATTCAGAGTTATGCTTAC ATGGGTGAGATTGAATGACAAGGTATGTGTTTGGATATCACGCAATGTAAATAGATTTTTATCTCAATTTTAAAGAGAAA TTTCATTAACTTTTATTTGATAATATTTATTTGCAGTGGTCCAACACATATCCAAACATACCCTTAAATTGTTTAATGTA AGGAAGTTTCTTAGGGAGAAATTGTTGTTAGGAGGAGATAAAGGAGCTTTACCAATTTCTTCTTGTGTTGTGAATAGCTT TAGTACAAGTTAAAGAAATGTAATTGGAGGGAATCATTGAAATATAGAATAGAAGAGTGAGTGAATGTGGGGATATGTCA TTTGATTGGGAAATCTCACTTTTGATTTGTTTATTTATTTGGAATATGTAAGTGGAAGTCAGAGGGTGGCCCACATTGCC CCTTTCAGTTTTTGTTTTGAAATTCAGTTCAAATTAAATGTCTGTGCATACCAGGAAAAATTAATCACAAAAAATTATAA TATATCTTCCAGTCCCAGATGCTTGCACACATGCTTTTGTGCTTTGTAACGAGTGGTCACCTAGAGGGGCTTCCATTGGA AGCACATGTAAAAAGGAGAAAAAAAAATCCATAAATGGTTTTATCCTCAGCCAAGTACTGGACATGGTCCTTCTGAATGA TGTGTGCATACGTAATTATTCCCTTCTTATTTCTAAAAAATTGTGACTCTGCAAAAAATTC
CDS sequence (LotjaGi3g1v0097100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGATGATCAGTTTCAAGCTAGTGGAAACTGGTGGGAATCAGCAAGAAACGTGAGATTTGAAAGTGGGGAATCACA GTCTTCATCTTCTGGTCTCACCAACTTTGGTGGCTGGCAACAACAACAGCATCATCATCATGATAACACCATTTCTGCCT CTGTCAGTAATTCCTCTGTGGTTTTCCATGATTCTCAGAAGCTTCAACCTCCAGATTCTGCAGCCACTTCTGCCACCAAC GACCCCAACTTGCACATGATGATGGGTTTGGGCCTTTCATCTCGAGCCATGGATTGGAATCAAGCATCTTTGCTACGAGG CAGCGAGAAGGCTTCAGAGGGAAGTTTCAGGTCCATGCTGCAAGAGAATTCAAGCCCCAACTTTCAGCAAGAAACTGAGG GTGTTGGTGTTGGTGTTGGATTGTCTCAAGTTCATTGGAGACCAGAAAAATTGTTCACTGCAGACTCTTCTAGCAATGAT TTCAAGCAAGTTGTGAACAGGGGTTTCTCTTTGGATCAGACACAGTTTAGTCCTCAATATAGCTCTGGAGACAGTAATGT GACAAGCCAAAGTTTGCCTTGTAACTTTCAGATTGATCATTCCTATGGGAACTCTTCAATATTACAAGGACTATTAGGAC CTGATCAAAGCAATAATCATCAACAACCCCAGCAAGGTTCATTTGAGAATCGTCCCATGAATAATTTTCCATACTCACCA AGCTATGGCTTCAATAACTCCAATAATGAGTTAGTTCCTTCTTGGTCTAAAGTTCCTCAATTCTTAAGAGCTTCACCTCC CAAACAACCACAAGCGAATAACCAGTTGCATTTTACCAACAACGCTCCCTTTTGGAACGCTTCTGAGGCTCCTATTAAGG ATGCTCGATCCAGCTTCTTCCCTTCTTTGCAATCCCCATTTCCTACACCAAGTTTTGATACACAATCAAAGAATATATCT GAAGTAAGGGACTCAAGTGCTGTGGTGAAGAAAAGTGGGAGTGAGCCAGCTCCAAAAAGGTCCAGGAATGAAACCCCATC ACCTTTGCCAGCTTTTAAGGTGAGAAAAGAGAAGATGGGGGACAGAATTACTGCACTCCAACAATTAGTTTCACCTTTTG GAAAGACTGATACAGCCTCAGTGCTCTCTGAAGCCATTGAGTATATCAAGTTTCTCCATGAACAAGTGACTGTTTTAAGC ACCCCATATATGAAAAGTGGAGCTCCAATACAGCATCAACAGAATTCTGGTAAATCCAAGGAAGCTGAGGGTCCAAAGCA GGATCTAAGAAGCCGAGGGCTATGTTTGGTGCCAGTGTCTAGTACATTCCCAGTGACTCATGAACCAACAGTTGAATATT GGACACCAACATTTGGAGGCACTTACAGATAA
Protein sequence (LotjaGi3g1v0097100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MADDQFQASGNWWESARNVRFESGESQSSSSGLTNFGGWQQQQHHHHDNTISASVSNSSVVFHDSQKLQPPDSAATSATN DPNLHMMMGLGLSSRAMDWNQASLLRGSEKASEGSFRSMLQENSSPNFQQETEGVGVGVGLSQVHWRPEKLFTADSSSND FKQVVNRGFSLDQTQFSPQYSSGDSNVTSQSLPCNFQIDHSYGNSSILQGLLGPDQSNNHQQPQQGSFENRPMNNFPYSP SYGFNNSNNELVPSWSKVPQFLRASPPKQPQANNQLHFTNNAPFWNASEAPIKDARSSFFPSLQSPFPTPSFDTQSKNIS EVRDSSAVVKKSGSEPAPKRSRNETPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTVLS TPYMKSGAPIQHQQNSGKSKEAEGPKQDLRSRGLCLVPVSSTFPVTHEPTVEYWTPTFGGTYR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 462 | 462 | 4.9E-161 | – | |
| PANTHER | 1 | 462 | 462 | 4.9E-161 | – | |
| MobiDBLite | 21 | 83 | 63 | - | – | |
| MobiDBLite | 207 | 242 | 36 | - | – | |
| MobiDBLite | 306 | 351 | 46 | - | – | |
| MobiDBLite | 306 | 327 | 22 | - | – | |
| ProSiteProfiles | 343 | 392 | 50 | 12.576 | ||
| Gene3D | 352 | 400 | 49 | 6.0E-7 | ||
| CDD | 353 | 396 | 44 | 2.35692E-7 | ||
| SUPERFAMILY | 353 | 410 | 58 | 1.31E-11 | ||
| SMART | 354 | 398 | 45 | 0.0049 | ||
| MobiDBLite | 407 | 429 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
Expression pattern of LotjaGi3g1v0097100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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