Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi3g1v0106800.1

Overview

Field Value
Gene ID LotjaGi3g1v0106800
Transcript ID LotjaGi3g1v0106800.1
Lotus japonicus genome version Gifu v1.2
Description Sulfotransferase; TAIR: AT5G07010.1 sulfotransferase 2A; Swiss-Prot: sp|Q8L5A7|SOT15_ARATH Cytosolic sulfotransferase 15; TrEMBL-Plants: tr|G7IVU2|G7IVU2_MEDTR Sulfotransferase; Found in the gene: LotjaGi3g1v0106800
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:13202146..13203552) extracted from Lotus japonicus Gifu genome v1.2.

TATAAATAAAGGTGGGTTGGAAGCTAAACTATCATACCAATCAGTGTCTATATTCTTATTCCAATGGCACCAACAGCTCC AACCATGTTTGCAAAATTCCATTCAAATGGTGATGAGGGAGCAATTGATCAAGAAGAACTTAGTGAAGAAATGAAGGATC TCATTCTCTCTCTTCCAAGAGAGAGAGGTTGGAGAACCAAATATCTATATCTATTCCAAGGCTTTTGGTGCCAACCAGCT GAAATCCAAGCCATAAGCACTTTTCAGAAGCACTTCCAAGCCAAGCACAGTGATGTCTTTGTTGCCACAGTGCCAAAATC AGGCACCACATGGTTGAAGGCACTAACCTTTGCCATTGTAAACCGCCAGAAACATTTAACCTTCTCCAAGAGCCACCCTT TATTAAATTCCAATCCCCATGACCTTGTTCCTTTCATTGAGTACACTGTTTATGGGAAACATGACAAGGTTCCTGATTTA TCCAAAATCCCTGAGCCAAGGCTTTTTGGAACCCACATTCCATTTTCTTCTCTGCCCAATTCAATCACCAAAGGCTCCAA TTGCAAGATTGTTTATATCTGCAGGAACCCTTTTGACACTTTCATCTCTTCTTGGTGTTTTGTCAACAAAATCAAACCAC CTTCATTACCCACATTGATGCTTGAGGAGGCTTTTGACATGTTTTGTAATGGGGTGGTTGGGTTTGGCCCATTTTGGAAT CACATGTTGGGTTATTGGAATGAGAGCATTGAGAGACCAAACAAGGTTCTGTTCTTGAAATATGAGGACATGAAAGAAGA TCCTGTTTTTCACTTGAAAAAGATTGCTGAGTTCTTAGGTTGCTCTTTCTCCTTGGAGGAGGAAAGTGGGGGTGTAATTG AGAACATAATTGATTTGTGTAGCTTTGAGAAGATGAAGGAATTGGAGGTAAATAAGTCTGGAACATTTGCCAGGATTTTC AAGAACAAGTTCTTGTTCAGGAAGGCTGAAATTGGGGATTTTGTGAATCATCTGTCACCTTTCATGGTGGAGAAATTATC CAAAGTCATGGAAGAGAAGCTAGGTGGGTGTGGTTTGTCATTTAGAGTGAACTCTCAATAGTGGGGCATGAACAATTAAT CTACATGTACGAAGTTGTACAAGTAACTTTACAAGATGGGCCTACTCTGTTTGTTTTTAGCTATATATATAATGCAATAA CCATATATGTGTTTCATAAACATGTGAAACAAATGTGGTTGTGGATTTCCCATTTTCAGAATAAAAAGGTTTATTGTGGA CAGAAAGAACTACGTATGATAAAAGGGGCGATCGCCCCACTTTTGTTACAAAAGTCATTGGTATAAGCATTTCCGCAAAA CATAACTTCCCCCTTCAACCACATACTACACACACTGTGTGACTGTG
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0106800.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCACCAACAGCTCCAACCATGTTTGCAAAATTCCATTCAAATGGTGATGAGGGAGCAATTGATCAAGAAGAACTTAG TGAAGAAATGAAGGATCTCATTCTCTCTCTTCCAAGAGAGAGAGGTTGGAGAACCAAATATCTATATCTATTCCAAGGCT TTTGGTGCCAACCAGCTGAAATCCAAGCCATAAGCACTTTTCAGAAGCACTTCCAAGCCAAGCACAGTGATGTCTTTGTT GCCACAGTGCCAAAATCAGGCACCACATGGTTGAAGGCACTAACCTTTGCCATTGTAAACCGCCAGAAACATTTAACCTT CTCCAAGAGCCACCCTTTATTAAATTCCAATCCCCATGACCTTGTTCCTTTCATTGAGTACACTGTTTATGGGAAACATG ACAAGGTTCCTGATTTATCCAAAATCCCTGAGCCAAGGCTTTTTGGAACCCACATTCCATTTTCTTCTCTGCCCAATTCA ATCACCAAAGGCTCCAATTGCAAGATTGTTTATATCTGCAGGAACCCTTTTGACACTTTCATCTCTTCTTGGTGTTTTGT CAACAAAATCAAACCACCTTCATTACCCACATTGATGCTTGAGGAGGCTTTTGACATGTTTTGTAATGGGGTGGTTGGGT TTGGCCCATTTTGGAATCACATGTTGGGTTATTGGAATGAGAGCATTGAGAGACCAAACAAGGTTCTGTTCTTGAAATAT GAGGACATGAAAGAAGATCCTGTTTTTCACTTGAAAAAGATTGCTGAGTTCTTAGGTTGCTCTTTCTCCTTGGAGGAGGA AAGTGGGGGTGTAATTGAGAACATAATTGATTTGTGTAGCTTTGAGAAGATGAAGGAATTGGAGGTAAATAAGTCTGGAA CATTTGCCAGGATTTTCAAGAACAAGTTCTTGTTCAGGAAGGCTGAAATTGGGGATTTTGTGAATCATCTGTCACCTTTC ATGGTGGAGAAATTATCCAAAGTCATGGAAGAGAAGCTAGGTGGGTGTGGTTTGTCATTTAGAGTGAACTCTCAATAG
Download CDS Sequence

Protein sequence (LotjaGi3g1v0106800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MAPTAPTMFAKFHSNGDEGAIDQEELSEEMKDLILSLPRERGWRTKYLYLFQGFWCQPAEIQAISTFQKHFQAKHSDVFV ATVPKSGTTWLKALTFAIVNRQKHLTFSKSHPLLNSNPHDLVPFIEYTVYGKHDKVPDLSKIPEPRLFGTHIPFSSLPNS ITKGSNCKIVYICRNPFDTFISSWCFVNKIKPPSLPTLMLEEAFDMFCNGVVGFGPFWNHMLGYWNESIERPNKVLFLKY EDMKEDPVFHLKKIAEFLGCSFSLEEESGGVIENIIDLCSFEKMKELEVNKSGTFARIFKNKFLFRKAEIGDFVNHLSPF MVEKLSKVMEEKLGGCGLSFRVNSQ
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:3.40.50.300
15 342 328 6.0E-103 –
PANTHER
PTHR11783:SF105
20 340 321 1.5E-166 –
PANTHER
PTHR11783
20 340 321 1.5E-166 –
SUPERFAMILY
SSF52540
47 341 295 2.39E-79
IPR027417
Pfam
PF00685
76 337 262 1.0E-62
IPR000863

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0008146
Molecular function Sulfotransferase activity Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0106800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…