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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR000863
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 34 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.741s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0092379.1
n.a. PREDICTED: flavonol sulfotransferase-like [Glycine max] gi|356541687|ref|XP_003539305.1| chr0 38463215 38464174 -
2 domain predictions
1 GO term
Lj0g3v0132389.1
n.a. Sulfotransferase [Medicago truncatula] gi|357456287|ref|XP_003598424.1| chr0 60407452 60408436 +
2 domain predictions
1 GO term
Lj0g3v0163829.1
n.a. PREDICTED: flavonol sulfotransferase-like [Glycine max] gi|356548883|ref|XP_003542828.1| chr0 77462234 77463053 -
2 domain predictions
1 GO term
Lj0g3v0245559.1
n.a. Sulfotransferase [Medicago truncatula] gi|357456287|ref|XP_003598424.1| chr0 127335574 127336071 -
2 domain predictions
1 GO term
Lj2g3v0716010.1
n.a. Sulfotransferase [Medicago truncatula] gi|357456287|ref|XP_003598424.1| chr2 11349622 11350307 -
2 domain predictions
1 GO term
Lj2g3v1838180.1
n.a. PREDICTED: nodulation protein H-like [Glycine max] gi|356537631|ref|XP_003537329.1| chr2 27772666 27777628 -
2 domain predictions
1 GO term
Lj2g3v1850290.1
n.a. PREDICTED: nodulation protein H-like [Cicer arietinum] gi|502152921|ref|XP_004509154.1| chr2 27810400 27814288 -
2 domain predictions
1 GO term
Lj2g3v1850290.2
n.a. PREDICTED: nodulation protein H-like [Glycine max] gi|356565626|ref|XP_003551040.1| chr2 27810400 27814288 -
2 domain predictions
1 GO term
Lj3g3v0776160.1
n.a. Sulfotransferase [Medicago truncatula] gi|357456287|ref|XP_003598424.1| chr3 9313942 9314610 -
2 domain predictions
1 GO term
Lj4g3v1682040.1
n.a. PREDICTED: flavonol sulfotransferase-like [Glycine max] gi|356523866|ref|XP_003530555.1| chr4 24330181 24331864 -
2 domain predictions
1 GO term
Lj4g3v1683070.1
n.a. PREDICTED: flavonol sulfotransferase-like [Glycine max] gi|356548825|ref|XP_003542799.1| chr4 24336060 24337313 -
2 domain predictions
1 GO term
Lj5g3v0165520.1
n.a. PREDICTED: cytosolic sulfotransferase 15-like [Cicer arietinum] gi|502167271|ref|XP_004514095.1| chr5 1533192 1533867 -
2 domain predictions
1 GO term
Lj5g3v0165530.1
n.a. PREDICTED: flavonol sulfotransferase-like [Glycine max] gi|356548883|ref|XP_003542828.1| chr5 1538519 1539699 -
2 domain predictions
1 GO term
Lj6g3v2134260.1
n.a. Steroid sulfotransferase-like protein [Medicago truncatula] gi|357514755|ref|XP_003627666.1| chr6 24838732 24839419 -
2 domain predictions
1 GO term
LotjaGi2g1v0399900.1
n.a. Sulfotransferase; TAIR: AT3G50620.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|P06236|NODH_RHIME Nodulation protein H; TrEMBL-Plants: tr|V7CFA1|V7CFA1_PHAVU Sulfotransferase; Found in the gene: LotjaGi2g1v0399900 LjG1.1_chr2 89703874 89708858 -
2 domain predictions
1 GO term
LotjaGi2g1v0399900.2
n.a. Sulfotransferase; TAIR: AT3G50620.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|P06236|NODH_RHIME Nodulation protein H; TrEMBL-Plants: tr|V7CFA1|V7CFA1_PHAVU Sulfotransferase; Found in the gene: LotjaGi2g1v0399900 LjG1.1_chr2 89704190 89708038 -
2 domain predictions
1 GO term
LotjaGi3g1v0051100_LC.1
n.a. Sulfotransferase; TAIR: AT5G07010.1 sulfotransferase 2A; Swiss-Prot: sp|Q8L5A7|SOT15_ARATH Cytosolic sulfotransferase 15; TrEMBL-Plants: tr|I1M0M2|I1M0M2_SOYBN Sulfotransferase; Found in the gene: LotjaGi3g1v0051100_LC LjG1.1_chr3 5370569 5371564 +
2 domain predictions
1 GO term
LotjaGi3g1v0051200_LC.1
n.a. Sulfotransferase; TAIR: AT5G07000.1 sulfotransferase 2B; Swiss-Prot: sp|Q8GZ53|SOT14_ARATH Cytosolic sulfotransferase 14; TrEMBL-Plants: tr|I3T277|I3T277_LOTJA Sulfotransferase; Found in the gene: LotjaGi3g1v0051200_LC LjG1.1_chr3 5375993 5376882 +
2 domain predictions
1 GO term
LotjaGi3g1v0051300_LC.1
n.a. Sulfotransferase; TAIR: AT5G07010.1 sulfotransferase 2A; Swiss-Prot: sp|Q8L5A7|SOT15_ARATH Cytosolic sulfotransferase 15; TrEMBL-Plants: tr|A0A151RGM9|A0A151RGM9_CAJCA Sulfotransferase; Found in the gene: LotjaGi3g1v0051300_LC LjG1.1_chr3 5386520 5387831 +
2 domain predictions
1 GO term
LotjaGi3g1v0051300_LC.2
n.a. Sulfotransferase; TAIR: AT5G07000.1 sulfotransferase 2B; Swiss-Prot: sp|Q8GZ53|SOT14_ARATH Cytosolic sulfotransferase 14; TrEMBL-Plants: tr|I3S0Q6|I3S0Q6_LOTJA Sulfotransferase; Found in the gene: LotjaGi3g1v0051300_LC LjG1.1_chr3 5386520 5387831 +
2 domain predictions
1 GO term
LotjaGi3g1v0106800.1
n.a. Sulfotransferase; TAIR: AT5G07010.1 sulfotransferase 2A; Swiss-Prot: sp|Q8L5A7|SOT15_ARATH Cytosolic sulfotransferase 15; TrEMBL-Plants: tr|G7IVU2|G7IVU2_MEDTR Sulfotransferase; Found in the gene: LotjaGi3g1v0106800 LjG1.1_chr3 13202146 13203552 +
2 domain predictions
1 GO term
LotjaGi3g1v0107000.1
n.a. Sulfotransferase; TAIR: AT5G07000.1 sulfotransferase 2B; Swiss-Prot: sp|Q8GZ53|SOT14_ARATH Cytosolic sulfotransferase 14; TrEMBL-Plants: tr|I1LLH6|I1LLH6_SOYBN Sulfotransferase; Found in the gene: LotjaGi3g1v0107000 LjG1.1_chr3 13214643 13215003 +
2 domain predictions
1 GO term
LotjaGi3g1v0315000.1
n.a. Sulfotransferase; TAIR: AT5G07010.1 sulfotransferase 2A; Swiss-Prot: sp|Q8L5A7|SOT15_ARATH Cytosolic sulfotransferase 15; TrEMBL-Plants: tr|I3S0Q6|I3S0Q6_LOTJA Sulfotransferase; Found in the gene: LotjaGi3g1v0315000 LjG1.1_chr3 66731767 66733359 -
2 domain predictions
1 GO term
LotjaGi3g1v0315100.1
n.a. Sulfotransferase; TAIR: AT5G07010.1 sulfotransferase 2A; Swiss-Prot: sp|Q8L5A7|SOT15_ARATH Cytosolic sulfotransferase 15; TrEMBL-Plants: tr|I3STZ9|I3STZ9_LOTJA Sulfotransferase; Found in the gene: LotjaGi3g1v0315100 LjG1.1_chr3 66759979 66761389 +
2 domain predictions
1 GO term
LotjaGi3g1v0324500.1
n.a. Sulfotransferase; TAIR: AT5G07010.1 sulfotransferase 2A; Swiss-Prot: sp|Q8L5A7|SOT15_ARATH Cytosolic sulfotransferase 15; TrEMBL-Plants: tr|I3S0Q6|I3S0Q6_LOTJA Sulfotransferase; Found in the gene: LotjaGi3g1v0324500 LjG1.1_chr3 69059398 69066779 -
2 domain predictions
1 GO term
LotjaGi3g1v0324500.2
n.a. Sulfotransferase; TAIR: AT5G07010.1 sulfotransferase 2A; Swiss-Prot: sp|Q8L5A7|SOT15_ARATH Cytosolic sulfotransferase 15; TrEMBL-Plants: tr|I3S0Q6|I3S0Q6_LOTJA Sulfotransferase; Found in the gene: LotjaGi3g1v0324500 LjG1.1_chr3 69059576 69066759 -
2 domain predictions
1 GO term
LotjaGi4g1v0106300.1
n.a. Sulfotransferase; TAIR: AT3G50620.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|P06236|NODH_RHIME Nodulation protein H; TrEMBL-Plants: tr|I1MVZ0|I1MVZ0_SOYBN Sulfotransferase; Found in the gene: LotjaGi4g1v0106300 LjG1.1_chr4 14782815 14786408 +
2 domain predictions
1 GO term
LotjaGi4g1v0106300.2
n.a. Sulfotransferase; TAIR: AT3G50620.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|P06236|NODH_RHIME Nodulation protein H; TrEMBL-Plants: tr|I1MVZ0|I1MVZ0_SOYBN Sulfotransferase; Found in the gene: LotjaGi4g1v0106300 LjG1.1_chr4 14783032 14786150 +
2 domain predictions
1 GO term
LotjaGi4g1v0106400.1
n.a. Sulfotransferase; TAIR: AT3G50620.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|P06237|NOH4_RHIML Nodulation protein H; TrEMBL-Plants: tr|I1MVZ0|I1MVZ0_SOYBN Sulfotransferase; Found in the gene: LotjaGi4g1v0106400 LjG1.1_chr4 14838197 14842218 +
2 domain predictions
1 GO term
LotjaGi4g1v0106400.2
n.a. Sulfotransferase; TAIR: AT3G50620.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|P06237|NOH4_RHIML Nodulation protein H; TrEMBL-Plants: tr|K7KP39|K7KP39_SOYBN Sulfotransferase; Found in the gene: LotjaGi4g1v0106400 LjG1.1_chr4 14838259 14841950 +
2 domain predictions
1 GO term
LotjaGi4g1v0106400.3
n.a. Sulfotransferase; TAIR: AT3G50620.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|P06237|NOH4_RHIML Nodulation protein H; TrEMBL-Plants: tr|K7MM76|K7MM76_SOYBN Sulfotransferase; Found in the gene: LotjaGi4g1v0106400 LjG1.1_chr4 14838951 14841576 +
2 domain predictions
1 GO term
LotjaGi4g1v0251900.1
n.a. Sulfotransferase; TAIR: AT2G03760.1 sulfotransferase 12; Swiss-Prot: sp|P52839|SOT12_ARATH Cytosolic sulfotransferase 12; TrEMBL-Plants: tr|V7CDV4|V7CDV4_PHAVU Sulfotransferase; Found in the gene: LotjaGi4g1v0251900 LjG1.1_chr4 60564660 60567589 -
2 domain predictions
1 GO term
LotjaGi4g1v0252000.1
n.a. Sulfotransferase; TAIR: AT5G07010.1 sulfotransferase 2A; Swiss-Prot: sp|Q8L5A7|SOT15_ARATH Cytosolic sulfotransferase 15; TrEMBL-Plants: tr|V7AJB5|V7AJB5_PHAVU Sulfotransferase; Found in the gene: LotjaGi4g1v0252000 LjG1.1_chr4 60570859 60572524 -
2 domain predictions
1 GO term
LotjaGi4g1v0252000.2
n.a. Sulfotransferase; TAIR: AT5G07010.1 sulfotransferase 2A; Swiss-Prot: sp|Q8L5A7|SOT15_ARATH Cytosolic sulfotransferase 15; TrEMBL-Plants: tr|V7AJB5|V7AJB5_PHAVU Sulfotransferase; Found in the gene: LotjaGi4g1v0252000 LjG1.1_chr4 60570859 60572524 -
2 domain predictions
1 GO term