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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0117300 |
| Transcript ID | LotjaGi3g1v0117300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glycerol-3-phosphate dehydrogenase [NAD](+)]; TAIR: AT3G07690.2 6-phosphogluconate dehydrogenase family protein; Swiss-Prot: sp|Q8S0G4|GPDH1_ORYSJ Probable glycerol-3-phosphate dehydrogenase [NAD](+)] 1, cytosolic; TrEMBL-Plants: tr|I1LL78|I1LL78_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0117300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:14386287..14391767) extracted from Lotus japonicus Gifu genome v1.2.
CAAGGTTTCACTCATTTGAGACATTTCATTCTTAACACCAAATTGGTGTGAAAAACATGTTTTTTCTTCTAGAAGTTCAC AGATGAGCTTTCCTTTCCTTCCTCTCTACCACAAGAAAGTGACTGCAAATTTTCTATCTTGTTTCCCTCTCACACTCAAT CACGTTTTCAAATTCCAGCATTGCACGCAAACGCAGGTGGCAAATGGGTGAAGCATTAGCTGAAAACTTCAACTTTGTTT GTTGGAATACCCGCCCATAATGTTTGTTTATTTTGTTGTCGGTTTCTGTTGGGTTTAGATTACCAAACTTGCAGATTTGA GATTCTTCATTGGTTTTTTCAAATACATGTTGTGTTCATAGATAGGTCTTCTTGGAATTTAGAAGAAGCTAGATGTTACT GATAGAGGGTTATAATCGGTTTATATTTCGACCCAGTTGGAAATTGTTGGTATTTGTCATTGTTGGGGTTGATTTTGTGA TAGAATTTGATGTTGTGTAAGTTTGAGCATGAGTCTTAGTTTTGAAAAAGTGTTGGAAATTGTGATCTTGGATGAGATTT TTCACTAGGATTTGAGGGCATTTGAGATCTTCTGTTCATATTTCTCAGAATTTTGAGGGATTCATAATATTTAGGGTTTA TCAGTGTTCTCTGGAACCAAGATGGTTGGAACTACTGAAGCCAATGGCCATGATGTGTATCTAAATGGTTCTCTTCAGAA TATAAATGGCGGTTTAGAAGAGAAGGTTGATGAGCTTCGCGCGCTAATTGGGAAAGTGGAGGGTGATCCATTGAGAATAG TTGGTGTTGGAGCTGGTGCTTGGGGTAGTGTGTTCACTGCTATGTTGCAGGAGGTTTATGGAAGTTTAAGAGAAAAGGTT CTTGTAAGGATATGGAGACGGCCCGGAAGGTCGGTCGATAGGGCCACTGCTGAGCACTTGTTTGAGGTGATTAATTCAAG GGAGGATGTGCTGAGGAGGCTTATTAGGAGGTGTGCTTATTTGAAATATGTTGAGGCAAGATTAGGTGACAGGATACTTT ATGCAGATGAGATTTTGAAAGATGGGTTTTGCTTGAATATGATTGATACCCCTTTGTGTCCTCTGAAGGTCGTGACAAAC CTGCAGGAGGCTGTGTGGGATGCTGATCTTGTGATTAATGGCTTGCCATCAACGGAAACCCGTGAGGTGTTTGAAGAAAT TAGTAAGTACTGGAAAGAGAGAGTCACACCTCCTGTCATTGTTTCGCTGGCAAAAGGTGTAGAGGCTGAATTAAGTCCTG AACCACGGATAATAACTCCCACTCTGATGATCAATCGAGCGAGTAAGATTCATACTCATTTATTTGTTTACCTGCTTTAT GTAGTTATACATGTTCATTTTGTGATCTGCTTGAACTACCACAATCCATCAATCTTGATCTGTTTACGGTGACCGTCTTA ATTATATCAACCTTAAGTTTTTTCTTTCTTTTAACATGCATATGACTGAGTTGATGTTAACCCAGGGTTGAACTATATTA TATTAATAGGGAGAAATCAGACATCCCGACTGGAAACATAAGACAGTCTTGTCTGGGTTATTAAACATTGATTTGAAGAA TCTTGTTCTTTAGTTAATGAGGAAGTGGTTAATTGTACAATTGAAACTGAGGAAGCACATTTAGGAATGTCCAATTAAAT AGCTCTTTCGAAGTACAGAATATCTCATTGAGCAAGATGTAATAAGTCTTTCCATCGAATACCGGAAATTATTTTGGAGG TTGAAGAAACAGCCTCCTTAATGTTAATATAATACCTCTGTAGTTATGATTGAGATGATTGCAACTAGGTGCTGTTATAT TCAGAAAGTGGGGAACAACTCCACTGCTTACTTCTCTTCTTCAGTAAGTTAATGTGTGATAGGTTTTCTGCTTTATGTGT GACTCTGAAATGGTATCCGAAAGAATCTGATATAGATTCCTCAAAGGGAACCGAGTACAATTAACTTCTGACCAATGTCC TTTTTCACATAGAGGACAAGAGAAAGTTTTTGGGTTACTTAGTGTGCTTAGGCGCAAAATGCCAAAACCACCCATCCTTT TAGAGAGACGCTTCATTAGAATTATTTAATTTAATCTGGCATTTGTGTGTGCTTTCACCCTCTCTTGATGCCAGTTTTTG GCTAGCATACAAGGGTGTTGCCCCTTGGTTACTACGAATGTAATTTTCACGTGTGTATACTGTATAGAAATTAAAATTGT TTCAGTTGCAATTCTGGAAGTCTAAAATATGGGATATATTCTGGGTGAATATGCCCTTTAGCATTTGGTTGAGCTCTTAT GATTCTGTGGGATTTTTCTTTTTGACTTAAAGGAACTAAATCTAAAGCCTTTACTGTAAATTGGAATAACTATACAAATG TGCATATCAGCATATCAAAATACCAATGACATAGTTTTTTTTTTTAATAAAATCTGTAAATTCATATGTAAATTGAATAT CGGAATGTAGTATTCTCTGCATGATAAGGTTACAGCAAGCTTCTATACCTCAGAATCATGTTATTTTTGTTGGTTCATGT AGAATTCTGGACAAACTAGAGATAGTGAATTTAATGTTTGATTGTCCTGTAGCCTGAGATATGTACTTACTGCTTTCGAG ATATTGAGATTTTATTTGATAAAATATAAACAAGAATTTCTTCTCTTACATGTATGTAGTTGATAACATATGCACGACTC ATTTCCATTGATTGTAACTTCTTTTGGAATCCAATAGAAGCTTATGTATTGGACCGTAATGTAGCACAAAATTTTCCCTG AAGAATGAAATGGCAATGCAAAGGAATCAGTTGATATTACGGGGTGAATCTTAATGTGCTTTCTCTTAATTCGTTTGTTT GTGAAGATGAAAATCTTGATGTTCTTTCTTGTGTTCTTATTTTTGAAGTGTCATGATGTCCTTGTTTCATAACACTCACA TCAGTGTCTGATAACATTCTTTGCACTTTGCAGCTGGAGTTCCCATGGAGAACATCCTTTATCTTGGAGGTCCAAACATT GCCTCAGAAATTTACAACAAGGAATATGCAAATGCTCGAATATGTGGGGCAGAAAAGTGGAGGAAACCATTGGCGAAGTT TTTGAGGCACCCTCACTTTGTCGTGTGGGACAATGGTGATCTTGTTACCCATGAAGTCATGGGTGGATTAAAGAATGTAT ATGCTATTGGAGCAGGTAAATTTGATTTAATTTTTACATTGTTACATTGTACAGACACAGCTTGCTAAAAGCTTAGGATC TTGCTATTTTTAAGCAGAAAATAGGTAAATCCATTCTAGTTTTATGTTGAGACAGAGAGCAAGATATTATTTGCTTTGGA ACTTCACCTGTATAGCTCATTCTGTCTGCTTTACTGAAATTTTTATTATCCTAATGTTGCAATAAAGAAAAGAAGAAGAG ATTTTTTGGGAACAATGGCAAGTCATTAGGTGCTTTACTTTGCATTGGTTACGCAATTTAGACAAGGGGGCTCCATATTC CTTAAACTGACTAGAGTTAGTTTAACAATTTCTCTGTTGAGCAAATGTGTCGAAGATCTCTAGATCTATAAGAAAACATT TTTATTTAGCTGCAATAATAAGGTATGATTCTGTTTTAGAAAGCTATCTTAAACAATCTATGATGCCAATCTAGACTTTC ATCAGATATTAACATTTTGTGAATAAGATTTCAATTTTCAAATATAATCTTGAATCAGTTGACATATGCTTTCACATATG AAAATGTGCACGTTAATGCTGTTCACGAGTGATTCTATGATATTTTGGACTTCAAATTCTTGAAAGATGTTAGTACATAT TTTGGAAAGAGTTGCATGTTACCACAGGGAAATACTATTTTAATATTTTGAAATCTTATAATTGTATTCATGAAGTTCAA TTTAACAGGAATGGTAGCTGCTTTAACAAATGAAAGTGCCACCAGCAAATCAGTATACTTTGCTCACTGTACATCAGAGA TGATTTTTATCACTCATCTGTTAACAGAAGAGCCAGAGAAACTTGCAGGACCACTGTTGGCTGATACTTATGTAACCTTG TTGAAAGGTCGTAATGCGTGGTATGGACAGAAGTTGGCCAAAGGGGAATTGAGCCTGGAAATGGGTGATAGTATCAAGGG CAAGGGAATGATTCAGGTACACGTTTTGGTCATTCAAATATCAAGATACCTATGTGGCCTAGGATAGTAGCTACATCTTA CTTTCTTGATAGAAAAAATTATAGATAGTAAAAATTATTTCAAGTTTTTAGATGCTGCTGGTCAATAATTATTTTGCTCT GCATAACTGTATGTTATAGGGAGTCTCTGCAGTTAGGGCATTTTATGAGCTACTTAGTCAGTCCAGCCTAAATGTTCTAA ATCCTGAAGAAAACAAGCATGTAGCCCCTGTGGAGCTTTGTCCCATCTTGAAGATGTTATATAGAATACTAATAATAAGG TAACGAATTTCGCCACCTCAATGATTTCTTCCTTTTGGTGAAAATAATAGATAACTGAATTCTGTTGTGAAGCTAACTAA TCTTTTTATATGGTTTTGCTGACCTTGATCTTCAGGGAATATCCAGTGCAAGCCATTCTTCAAGCATTAAGAGATGAGAC CATGAATGATCCCCGGGACCGTATTGAAATTGCCCAAAGCCATGTGTTTTTCAAGCCATCTCTTCTTGGTCAGAGACCTT GAGTGCTAGTTTCATGTGTTTGGTGGTAAATTTTGACATTGGTATTTGTGAATTTCTGTGTATCACATTCCCCCTCCAAA AAACTAGGAGTAGATGCTGGACATCTCTGAGATTTTCATCGTAAATGACTGTAGGTGTTCTAGTTGAGGCTCTAGATTGC TAATATTAGAGTGATATTCGTAGGTCTATTGCCCGAATTAGTTGCACGGATTTACTGTGTGTTTTGTTTTAGATTTGGAA AGAAATTTCATTGGTACATACATGTGTTCTGATTTTCTTATCTTGATGGGGTTGCTTTTGTCAAGTTTAAATCTTGTGTT AAGGGTTAAATATGTTTAGTCCGCATAAAATAGGGTTGTTTTGAGTTTAGTCCACATCTAATAAAATCGGAGGGTTTAGT CCCTTGTCTTTTTTTATTACCGAGTTTTACTCCCTTGCTGTTGACTTCGTTAAAAAAAGGCTTAATAACACTTTTGGTTC CCCATGAATACGATATGTGCAAACAGGGTACCTAAACTTCAAATTTTGCATTCTGCCTCCCCGACGTTATATACTGTCAA CAGTTTTGGTTCTCAAGAGAGTTTTCCAGAAAAAAAACTAACGTTTTTTTTGCATTCTTCCTGGGCTTAAAGGGTCCAAA GGCCCCTGAGATTACAAAGGGAATCAAATCCAGGACCTAGAAAAATTTTACATCAAATTGGGTCCCTAAGAATTTTTTTT TAATTCAATTAAGGCCAAATCCCAATTTCGTCCTAATCATC
CDS sequence (LotjaGi3g1v0117300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTGGAACTACTGAAGCCAATGGCCATGATGTGTATCTAAATGGTTCTCTTCAGAATATAAATGGCGGTTTAGAAGA GAAGGTTGATGAGCTTCGCGCGCTAATTGGGAAAGTGGAGGGTGATCCATTGAGAATAGTTGGTGTTGGAGCTGGTGCTT GGGGTAGTGTGTTCACTGCTATGTTGCAGGAGGTTTATGGAAGTTTAAGAGAAAAGGTTCTTGTAAGGATATGGAGACGG CCCGGAAGGTCGGTCGATAGGGCCACTGCTGAGCACTTGTTTGAGGTGATTAATTCAAGGGAGGATGTGCTGAGGAGGCT TATTAGGAGGTGTGCTTATTTGAAATATGTTGAGGCAAGATTAGGTGACAGGATACTTTATGCAGATGAGATTTTGAAAG ATGGGTTTTGCTTGAATATGATTGATACCCCTTTGTGTCCTCTGAAGGTCGTGACAAACCTGCAGGAGGCTGTGTGGGAT GCTGATCTTGTGATTAATGGCTTGCCATCAACGGAAACCCGTGAGGTGTTTGAAGAAATTAGTAAGTACTGGAAAGAGAG AGTCACACCTCCTGTCATTGTTTCGCTGGCAAAAGGTGTAGAGGCTGAATTAAGTCCTGAACCACGGATAATAACTCCCA CTCTGATGATCAATCGAGCGACTGGAGTTCCCATGGAGAACATCCTTTATCTTGGAGGTCCAAACATTGCCTCAGAAATT TACAACAAGGAATATGCAAATGCTCGAATATGTGGGGCAGAAAAGTGGAGGAAACCATTGGCGAAGTTTTTGAGGCACCC TCACTTTGTCGTGTGGGACAATGGTGATCTTGTTACCCATGAAGTCATGGGTGGATTAAAGAATGTATATGCTATTGGAG CAGGAATGGTAGCTGCTTTAACAAATGAAAGTGCCACCAGCAAATCAGTATACTTTGCTCACTGTACATCAGAGATGATT TTTATCACTCATCTGTTAACAGAAGAGCCAGAGAAACTTGCAGGACCACTGTTGGCTGATACTTATGTAACCTTGTTGAA AGGTCGTAATGCGTGGTATGGACAGAAGTTGGCCAAAGGGGAATTGAGCCTGGAAATGGGTGATAGTATCAAGGGCAAGG GAATGATTCAGGGAGTCTCTGCAGTTAGGGCATTTTATGAGCTACTTAGTCAGTCCAGCCTAAATGTTCTAAATCCTGAA GAAAACAAGCATGTAGCCCCTGTGGAGCTTTGTCCCATCTTGAAGATGTTATATAGAATACTAATAATAAGGGAATATCC AGTGCAAGCCATTCTTCAAGCATTAAGAGATGAGACCATGAATGATCCCCGGGACCGTATTGAAATTGCCCAAAGCCATG TGTTTTTCAAGCCATCTCTTCTTGGTCAGAGACCTTGA
Protein sequence (LotjaGi3g1v0117300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVGTTEANGHDVYLNGSLQNINGGLEEKVDELRALIGKVEGDPLRIVGVGAGAWGSVFTAMLQEVYGSLREKVLVRIWRR PGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGDRILYADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWD ADLVINGLPSTETREVFEEISKYWKERVTPPVIVSLAKGVEAELSPEPRIITPTLMINRATGVPMENILYLGGPNIASEI YNKEYANARICGAEKWRKPLAKFLRHPHFVVWDNGDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMI FITHLLTEEPEKLAGPLLADTYVTLLKGRNAWYGQKLAKGELSLEMGDSIKGKGMIQGVSAVRAFYELLSQSSLNVLNPE ENKHVAPVELCPILKMLYRILIIREYPVQAILQALRDETMNDPRDRIEIAQSHVFFKPSLLGQRP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 465 | 465 | 1.4E-267 | – | |
| PANTHER | 1 | 465 | 465 | 1.4E-267 | – | |
| SUPERFAMILY | 45 | 276 | 232 | 4.16E-13 | ||
| Pfam | 148 | 250 | 103 | 1.0E-9 | ||
| Pfam | 276 | 429 | 154 | 9.1E-24 | ||
| SUPERFAMILY | 276 | 422 | 147 | 2.21E-22 | ||
| Gene3D | 281 | 437 | 157 | 2.0E-19 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Glycerol-3-phosphate dehydrogenase [NAD+] activity | Catalysis of the reaction: sn-glycerol 3-phosphate + NAD+ = glycerone phosphate + NADH + H+. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Molecular function | Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP. | ||
| Biological process | Glycerol-3-phosphate catabolic process | The chemical reactions and pathways resulting in the breakdown of glycerol-3-phosphate, a phosphoric monoester of glycerol. | ||
| Molecular function | NAD binding | Interacting selectively and non-covalently with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD+, or the reduced form, NADH. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi3g1v0117300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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