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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0118100 |
| Transcript ID | LotjaGi3g1v0118100.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperone protein dnaJ, putative; TAIR: AT2G35795.1 Chaperone DnaJ-domain superfamily protein; Swiss-Prot: sp|Q8RV04|TI141_ARATH Mitochondrial import inner membrane translocase subunit TIM14-1; TrEMBL-Plants: tr|B9MT90|B9MT90_POPTR Uncharacterized protein; Found in the gene: LotjaGi3g1v0118100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:14461766..14463901) extracted from Lotus japonicus Gifu genome v1.2.
AGCCGCCGCGCGCAGGTATCCGTCATCCCCTTTTTTGTTCGTACGCCACGCTCAGGTGTTCGCCGTCCCCTGTTCTCCGT GCTCCGCAATCATGGTATGTCTATTTTCCTTGTTGCTTTACATTCTGGTTTCGATCTAAACAACCCCTATTTGCCTTAAC TTTTTTCAATTTTCTCTAGCCTTGTTATCTTGATTTGATGAGCATGATTTTGAGTTTAATTTTCATGACCATAAGCCCCT TTTTGTAGTATTTTCAATTTGTGTTTCTTTTGTGGAACTGAAATTGGAATTTGGAACAGGCTACACCTCTTATGGCAGGA CTTGCTGTGGCTGCTGCAGCTTATGCTGGTAAATATGGTATACAGGCTTGGCATAATCTCAGGAATTTGCCTAAAAAGTT TTATGAAGGCGGTTTCCAGGCTACCATGACTAGGAGAGAAGCAGCTCTCATACTGGGTGTTAGGTACCGCCATTTGTTTC TCGGTTTAATGATTCTGTATGTTGATTGTGTTAGTAGCTTATTGGTTTATTGCACTGGTAATTATCTGTAGGGCGTTGTT TGTCACCTTTTAGGTTATGGGGTTAATCGATTGAATTAATGATCAATATTTCTCGTTTGAAAGAATTTGGTTCTTCTAAA GAGAGGTGTTCATTACTTCATTTAGAGGGTAATGAGTGTTTTGTTCAGGTTGATGTTCCGAAGTTTGGGAATTGGGATTT GGGATAAAGTCAGTAAGAGAGTTGGGATTAAGAGTCACAACCATCTTAGCATGTTGAATACTAGCCTTTCTTGTAGCTTG TTTGTGTGTGCATCAAGTTTCTTTGTTTGATTAGTGAAGCACTCTTAAGCATATAGCTTATGATCTGGTTAGTGTCAGAA ATCAGACTGTTAGAAGTGCTATGAAGCACCAATTAACAACTTGTTTACCAGTTTGGTATCCAGGCCGTGTCAATGTCTGA TATGGACATCATGTGACAGGATACATCCTTCTCACATTTCTGTTTTTTTCATTCAAATTTAATACTTCTTTCAAACCAAC TTGGATATGGTTGATGGTTTAGACTTTAGAGATAATGCACAATATGGTGTAGATACATTGCTCTGTAAATGCAGCATCGG GTGATAAAAGAAACTTCAAAATTTCCCACCTGTTGTGAATTTTAATTTTATCACTTAGCAGTCGCCAGGGTACTCCCCTA AGGCTTCCAAAAGGCATCTATTGCAGAACATTTTTCCATCAAGGTCACAGTCACGGGCCATTGTTTCTGAAAAACATCGC AGTTATGCCTGTTACCTTCATAGGGCTGCAACCATTTTCTGAGTTATCAAACCAATTATCACGTATTTTTTTTTTGATTT GCCTCTTATCACATCTGATGATGCATATAGGCCAACTTTGACATTTTCTGACAAACCCACTGCACTCCAACATCCACGCC TATCTGTTCTTCCCTTCCAGATTCGGTATCTCATCATTTCAGGGATCATAGCTTGCAGCTCTCTCACTCACTCTCACATG TTCTTCATTCTCATTTCACATTCCTCGAATTTGTATCTGTTCTTTTTTCCCCAACTTTATTGTTCTGTGTTCACATGTCT GATATATTCTGTATTTTGTTCTTATTAATTTGTTCCTTTATTTATTTTTTTAGAATGGTTTTGTCATTATTGACTTGTTA ATCTTCAAGCCTTAGATTGATGATGGTGATTTTAGGTATTTTTTCAGAGCATTTATGTGTATGGTATTAATTATTGATGT TGTATGTATTTATAATCTTCAGGATTGCAACCATCCGACTTTGTCTTTAAGAAACTTTAGTCTTTATGAGCTTGAATTGT GTCTTGCTGTGTTCATATTTTCCCTCTATGTAGTATGGAATTTCACTGGTTAGAATTGGATTTTCGTTCCTAGTCATGAC CATGACAATTTTATTACTAGATATATTCTCTTGTTGATTTTCAATTGTCACTATGGCAGAGAGCGCACTCCAACAGATAA GATTAAAGAAGCACATAAGAGGGTGATGATCGCTAACCATCCAGATGCAGGTGGCAGCCATTACCTTGCATCCAAAATTA ATGAAGCAAAAGATATGTTGCTTGGAAAGCCCAAGGGTGGTGGGTCAGCATTTTGA
CDS sequence (LotjaGi3g1v0118100.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGGACTTGCTGTGGCTGCTGCAGCTTATGCTGGTAAATATGGTATACAGGCTTGGCATAATCTCAGGAATTTGCC TAAAAAGTTTTATGAAGGCGGTTTCCAGGCTACCATGACTAGGAGAGAAGCAGCTCTCATACTGGGTGTTAGAGAGCGCA CTCCAACAGATAAGATTAAAGAAGCACATAAGAGGGTGATGATCGCTAACCATCCAGATGCAGGTGGCAGCCATTACCTT GCATCCAAAATTAATGAAGCAAAAGATATGTTGCTTGGAAAGCCCAAGGGTGGTGGGTCAGCATTTTGA
Protein sequence (LotjaGi3g1v0118100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAGLAVAAAAYAGKYGIQAWHNLRNLPKKFYEGGFQATMTRREAALILGVRERTPTDKIKEAHKRVMIANHPDAGGSHYL ASKINEAKDMLLGKPKGGGSAF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 1 | 1 | - | – | |
| Phobius | 1 | 12 | 12 | - | – | |
| PANTHER | 1 | 102 | 102 | 5.2E-58 | – | |
| PANTHER | 1 | 102 | 102 | 5.2E-58 | – | |
| Phobius | 2 | 7 | 6 | - | – | |
| Phobius | 8 | 12 | 5 | - | – | |
| Phobius | 13 | 102 | 90 | - | – | |
| Gene3D | 29 | 94 | 66 | 9.1E-25 | ||
| SUPERFAMILY | 33 | 93 | 61 | 1.7E-16 | ||
| SMART | 42 | 96 | 55 | 0.0084 | ||
| CDD | 47 | 91 | 45 | 2.39072E-5 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0118100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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