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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0120400 |
| Transcript ID | LotjaGi3g1v0120400.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Methyltransferase; TAIR: AT5G13710.1 sterol methyltransferase 1; Swiss-Prot: sp|Q9LM02|SMT1_ARATH Cycloartenol-C-24-methyltransferase; TrEMBL-Plants: tr|Q43445|Q43445_SOYBN Methyltransferase; Found in the gene: LotjaGi3g1v0120400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:14744316..14751426) extracted from Lotus japonicus Gifu genome v1.2.
ATTTAGTTGTACAGTACAAATCGCTTGACAACCCAACGTGGTCTGATCTGATGTACTTTCCCAGTCACATAAATCCATAA ATGACAGCAATTCGCTGACTCATAATTCATCGCTACTCACATAAATAAATATAACACTTCACACTCTGTCTCACTCTCAT ACATACACTCCTCACGTGAGTTCCTGGCTTCCTGCATTTCCCTTTTCTTCTTGATTCCGATTCATTCACCTCCCCGAAGC TGCAGCTATGGATTTGGCATCCAATCTTGGTGGCAAGATTGACAAAGCTGAAGTTCTTTCTGCGGTTGAAAAGTGTGTCT CTCCTTCTCTTTTGCCTTTTTTCCTGTTCAATACGCATTGTGTTTTAAACTTAGTTTTGCTGATCCAAATGAGTTATTTG CATTAGTTACTCACTCCACTCACTGTGTTTTTTTTTCCTCAGTTCTCAGTTGTTAGACTTGAATCACGCAGTGTAAGAGT TGTGTGAGTGATGATATTTAACAAACAAAATGTTTGCATTTTTTTTGTCATGAAAATGATAATTATGATTCAGAAAATTT GGATAAAATAGTGTAGAATCCCTCTTGTTGTGGGATCTGGTATAAAAAGGGTTGATTACTATATTGTAGACTTTGAAGAT TGGGGACTGTGTTTCATTTTTATAAAATGAAAATTATTGAAAATTTAAATATGTAAAAAGGTATAAAAAAACATGACTAG ATATAATGATGTGTACGTATAAAATTATTTGCATAAATGTTAACATGACTAGATATAATGATTGTTGTTCAAATTGTTGT TGAATTTAAGGCCATATACATGACCGTACTTTCACATGCTTGGTTTTGGTGGTAGTGATCTCTTAGGTGGCTGCTGGATT TTTCAAGTGTCATCTTTTCTCTTTTTAGATTTTAATTTTTTTGTTTTGTTTCTGATTTTGTGTGAACTTGCATTCGGTAT TTGTGTTTTTTGTCAATTGTCGATCTTGCGAGTTTTCTCTGCTGGGAAATGTCTTTGTTCTTTGTGTTTTCTGTTATACC TTGATAGGATCTCATTTTAGTTGAACTTGTCGTCACATGTAGTACCCAAAAGAAGGTCTTTCCTAGTGATTCAATGTTGC TTGATATGGAATTTTAGGTTTTGTCCAAGTGGAGGCAAAGACTTATCTCTTTTGAACGGTTTGATTCATTCTTGTTTTGA TAAAGACCTAAATGTGTTTGCCTCTTTTACAGAGTTTTGTGATCCTAAATATTTTTGATGAAAAAATTAATCGAGAGAAT CTCATAAATGACAAGCACTAGCATTAGTATTTAGTTGGACACATCGCTTGCTAACCCAACTTGGTCGCAGTTGTGTGTTA AATTACTCTTATAATTTTAACTCAACTATGACTAAAGCCAAATGTTCTTTAAAGTTGTAGCTCATATGATTCGAACTCTC GGCTAAAACAACCATTTTTTACCATTACAAATGACACCACCAGTTGGGTCAGGGTCACCCAACTTGGTCAACCTGGTCCT TATAGTTGATGTATACTTCTCAGAAAATCCATAAATGCCAGCCATTCGGTGACTCATTTTTCTGCTGTCCACTTTGCCTT TTCTCTCATTGGTTCCCTCGCTCTTCCCTCTCTCTCTTCCTTTTATTCATCACTCAGTCTCAGAAACTCACCACGTGAGT TTTCCCTCCCGCATTCCCCTTTTCTCCTTCGATTCCGATTCCGATTCATTCACCATTCTCTCAACTCAGATCCAAACGTC GTCGTTTTCTGCTCCCTGAACCTGCACCTATGGATTTGGCTTCCAATCTCGGTGGCAAGATTGAAAAAGCTGAAGTTCTT TCCGCTGTTGAAAAGTGTGTCTCTCACTCTCTTTTACTTTTTCTTCTTTTCAAAACGCATTGTGATTTTATACTTTGATT TTGCTTATTGAAATGCAGTTGTTATACTTGAATCATGCAGTGTGAGAGTTGTTTGCAATTTTTTTTTGTCATGAAAATGC TAATTGTTATTCAAGATATTTGGATAAAATAGTGTAGAATCACTCTGGCAGTGGATCTGGTATCAAAGGGGTTAATTACT ATATTGTAGAATGTGAAGATTTGGGACTGTGTTTCATTTTTTATAAAATGAAATTATTGAAAATTTTGATATGTACAAAG GTTGACAAATAATAATTGTTAAATTTGGATTAGGAAATTGATTGAATCTGTGTTGGATACAGTGTTGTTAATAGCGGATG GGGGGTCGTGTCGGAAAGCCGAAACCCTGCCATAGATGACAAATAATGGCGGGATATGGCGGAATAACACTGGTTGGATC TGATATAAAATGACTACTGTATGAATTTTGACCATAAAAATTTGGGATTTTTGTTTAACTAAAAGTAGAAGGGAATTGGG GAATTGAAGTCTTTGTCATCCTCTTTGGAAATATTAGGATTTCAGGAAAGGAATCACATCCTGGTCCATCCTGCAATTGC AATCAATGCATTATTGGAATACTGGGTCAGTCTCATTTTGATTATGATCACACCTTACCTAACAACTAGCAACACACTGT TCACTGTTATGAATGACCACCCAGTTGAATGTAGTGAAAACTGAACTGTAATTTCAGGCTTTAACTGGGAGTTTTATTTA CCTCAAGTAAAAAAATTCAACACACTGTTCATGACTTCATCCTTTTATTCAGTTTAGGAATCAGGAATATCTGCAATTTT TATATGTGAACTAAGGATGCTATGTTGCTAGTGGCTGTTTGGTTTTGAGGTGGAAAGTCCCATAATTACTTATGGAAAGA AGCTATAATTTGTATCTTCTGGAATTACAGTGCTTTGAATTGTGTGTCACCGCCAATCCAAGCATGCTTTAAACCTTTGG GTGGTTACAGAAAAGTGGACACATTTTTTTCCAGTTATTTAAGTTTGCTCTTAAAAGAATATTTTCTAATTAAAATTTTC TGCATTGCAACTGCCCGTGCTGTCGTTTGAAGAGATATTTTAGTTCTATATTATCTCCTTAACTTTGTATTGTCGGATTT ATTACTGCTCTTTGCTTTATATTCACTGACTAATATGGTTTGCAATGTGACAGTGATCACATGATTGCCTAGAATCTAAT GGGGAATTAGGGATACTGCTAATCGTTTAAGTTATTTATTTATATATGGATTTGTAATAATGATTTCATATGTTATTTAT TATTATTACACTGCTGTATTTGGGTGAAGAACATAACCATTGCCATCATACAGTGTAAGAGAGTTTGTTGTTAATCATTA TAGCTTTTGCATATGGTAAAAAAATAGGTATTTGCATGATAATATTTCTTTATGTTAGCCTGATGAAATGTATTGATCTT ATGGTTCAGGTATGAGAAGTATCATGTATGCTATGGAGGTCAAGAGGAAGAAAGGAAAGCTAACTATACTGATATGGTGA GAGATATCAATAGTTAACAGCCAATATTTTAGTGTTATTTTTTCTACTGATAACATGGATATCAATGGCAAGTTGGCAAC CTTGTCAGATGCATACTATATACCTTACCTATTCTTTATGATTTTACGTTCACACTTTTTCTGTATGGGGAGTACTTTTC TTTTTTCTCTTTTATGGGAACTGCTAGATTTATTCTAATCCTACAAGATATTAAGAACTTCTGTTTGACTAAAAATGTCT TTCATTCTTTACAATTTTTATGGAGGTATCTGTCACGGAAACAAAATCTACTTTGAATGTCTAGGTAGGTAGTTAGTTAT CTAGTGATATAGATTTTTTACTTCAGTCAAGTTTATATTGAAATGATTAACTTGTAGCTATATTTTTTTATTTAAAAAAA ATATTGTAAATGAATATTGACTCTTCCTTTTTAGATATCTACTTTCATCACACTTGTGAGGTTGTATAACATGATTCGAG AAGTTCGGGAATACCATGTTTTTAGTCTTTACTTATTATAGTTGATTTGATTATCTGCAGAAAGAATATCATATGATCTG CATATGTTTTCAGGTTAATAAATACTATGATCTTGTTACCAGCTTTTATGAGTTTGGCTGGGGGGAATCTTTCCATTTCG CACCCAGGTATCCATTTACTTCATTTTGCAATTGCAAATTAATTTTTTTTGTCGATTTGATCATACTTATAATTTTCTCC TTATGTAGATGGAAAGGGGAATCTCTTCGAGAGAGCATCAAGCGACATGAGCACTTCCTTGCTTTACAACTTGGCCTGAA GCCTGGAGAGAAGGTTTTCATCTTGAATAAAGCAAATTAGCTAACAGATACCTGGCTTTCATGCTATCTATTAAAATTTG TTTTCTTTATTTGTTTAAGGTTTTGGATGTTGGATGTGGAATTGGGGGACCATTAAGAGAAATTTCGCGATTCAGGTATA CATCACCTTTTCGTTTATACTTGCTCTTCCTTTGCACTTACCTGCTTTACCTTGACTGGAACAAAACTCATTAAGCAGTA TTTGTGCAGCTCAACATCAGTTACAGGGTTGAACAACAATGAGTACCAGATTACAAGAGGAAAGGTATGTATTCCGAGGT TAAATGCATTGATACCTTAATCATCATATCTAATTGCTAGATCCTGATTGGTCCTAAAACTGTCACTAATTTTGTATTGA TTCATTTTTCTGACATAACATTGATGCATTGTTTAAGCAGTGGTAATGTACTTATGAGTTATGACAGTTGTCTATTATTA ATTTAATAGGTCCCTCATGCTAAATTTCCAGTTAGTTGGGCAAATTCTAAAAAACTTTTTTGATTGAGATATTATATTGT ATATTTTATTAAAAAAGACAGTACATAAACCCAAAAATTCTAAAATATGTTGATCACTAACTGATATTTACTGATTAACA GGAACTCAATCGTATTGCTGGAGTGGACAAGACTTGCAACTTTGTCAAGGTTGATACTTCGTAAATCAATTATTTCTGTT TATGGGAGTGGGAGGCCTTATATTTCAACACATATAGGTCCAATGTTTTGTGAAGTTGTTCAACTCCTGATATCTGTTGC GTTGTATATTTTATTTAGTGTGTTTGGGTGAGCTCAAGAGACACCTTACGGTTTAAAAGCTATTTCAAATTCAGCATTAC CAAACAGTTGCTCAAAGCCTCATAACAAAATGATATTGTTTTAAAATTATTGTTAACATAAGTATCATATTTTTTAATGC AGGCCGACTTCATGAAAATGCCATTCCCAGACAATAGTTTTGATGCAGTGTATGCAATTGAAGCTACCTGCCATGCACCA GATGCTGTATGTGACAGTACTTCATACTATCATTAGTTTGCCATCCCTATTTTCCCTACTGCAGCTTTATATCTTTACAT GTATCCATGATTTGTTAAATATTATGAACCATCTTTCAATTTGGCCAACAATAACAGCTTGAAGTGCACATTTAACTGTG AATCTATAAAATGGTCTTTATTTGTATTATGACACTAATAATTTTTCCTGCCTTGTAATATGGATAGTATGGATGCTATA AAGAGATTTTCAGAGTGTTAAAGCCTGGCCAACACTTTGCTGCTTATGAATGGTGCATGACAGATTCTTTTGATCCCAAT AACCAAGAGCACCAAAAAATCAAGGTATGATATTTGAGGGATAGAAAGAATTTTGATTGAGTTTATTTATTGAGTCTATC AAAGCCTCTTCTTTGTTTGTTATTCAATAGATAAAATTCCTTGTTACAGGCAGAAATTGAGATCGGTGATGGGCTTCCTG ACATTAGGTTGACCACAAAGTGTCTTGAAGCTCTAAAGCAAGCAGGTTTTGAGGTGAACTCAAGTTTCTTATTTTTTATA AGTTATAACCTTCTGCTAGTATTCTATTTTTAATACGTATTAGATGAAACCTAATTGTCTAATGGGGGATTCTTTCCTTA TGTCTGTGAAGGTAATATGGGTGAAAGATCTAGCTGTGGACTCTTCTCTTCCTTGGTACTTGCCTTTAGACACAAGTCAG TTCTCACTTAGTAGCTTCCGTCTTACAACTGTTGGACGACTTTTCACCAAAAACATGGTATTGTTATTGAACATAGCATA TATTTCTTATTTCACTTTAGGTATCCTTTTGGTATTATTCCTCAGAGTTCTTTGGTAATTTGCACCCTGTTGAGAAATTA AAGATTCTATTCTTCTATTACTCAAAATTCAATTTCATTAGGGGCTATGGGTTTATATTTGTAGGTCAAGGCTATGGAGT TTGTTGGTCTGGCTCCTAAAGGGAGTCTAAGAGTTCAAGATTTTCTAGAGAAGGCTGCAGATGGCCTAGTCGAAGGCGGA AAGTAAGTTTCTCATTTATCCCATTAATGTCATCTAGCTTATATGAAATATATGGATATAATTTTTCATGTAAGTTAAAA TAGGGACTCTCTTAGCAATATGTGTAGTTCTAATCAATACAGCAATTTCTAAACTGGAAGATGAATGCATTTAGGCCTTT TGAGTGATTGCTGATAAATTGAATACTAAGATTAACTACTACTACAAAAAAAAAAGATTAACTACTACCAACTTGTGAAA ATTTATCTTGAGCAGGGAACTGTCTAACTTGACTTGCTTATGTTTACCTTTTCAGGAGAGAGATTTTCACACCAATGTAC TTCTTTTTGGCACGGAAGCCATAGTAACTAAAGTAGTGGTGAAAATAGGTTGTTGTTTTCAATTGTTACTGTGATTCTGG GTGGAGGATCCTAAGCTAAGATTGTCTTTGGCCTTTCCGTTGTAAGTTTAGCTGTTTTCGGTTGCTTGTTTGCTTGGGGA AGCAGTGCTACTCCTGCGTTACTGGATAGTATAGTTTTTTTTACAAATATGGATTGATTTTCATGTCTGGTTTGTTTATC CTACATGTTATGAGTGGGGGTTTTTACCCAGAAGGGCAGGCAAAGTAATTTAAAAGCTGATTGAAGTCAAATTATTGTTC AATGTTTTCAAATCTGAATTGGTCATTAAATTGATGAACAGTTTTTTTAATCAACCACGATCGAGCTAATAATATAATGC AAAATGATAAAACATCTTCAAGCTCAACAAAAGACATCAATAGGCGTCTGGAGCGTGGACAATTGACTCCC
CDS sequence (LotjaGi3g1v0120400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATTTGGCATCCAATCTTGGTGGCAAGATTGACAAAGCTGAAGTTCTTTCTGCGGTTGAAAAGTATGAGAAGTATCA TGTATGCTATGGAGGTCAAGAGGAAGAAAGGAAAGCTAACTATACTGATATGGTTAATAAATACTATGATCTTGTTACCA GCTTTTATGAGTTTGGCTGGGGGGAATCTTTCCATTTCGCACCCAGATGGAAAGGGGAATCTCTTCGAGAGAGCATCAAG CGACATGAGCACTTCCTTGCTTTACAACTTGGCCTGAAGCCTGGAGAGAAGGTTTTGGATGTTGGATGTGGAATTGGGGG ACCATTAAGAGAAATTTCGCGATTCAGCTCAACATCAGTTACAGGGTTGAACAACAATGAGTACCAGATTACAAGAGGAA AGGAACTCAATCGTATTGCTGGAGTGGACAAGACTTGCAACTTTGTCAAGGCCGACTTCATGAAAATGCCATTCCCAGAC AATAGTTTTGATGCAGTGTATGCAATTGAAGCTACCTGCCATGCACCAGATGCTTATGGATGCTATAAAGAGATTTTCAG AGTGTTAAAGCCTGGCCAACACTTTGCTGCTTATGAATGGTGCATGACAGATTCTTTTGATCCCAATAACCAAGAGCACC AAAAAATCAAGGCAGAAATTGAGATCGGTGATGGGCTTCCTGACATTAGGTTGACCACAAAGTGTCTTGAAGCTCTAAAG CAAGCAGGTTTTGAGGTAATATGGGTGAAAGATCTAGCTGTGGACTCTTCTCTTCCTTGGTACTTGCCTTTAGACACAAG TCAGTTCTCACTTAGTAGCTTCCGTCTTACAACTGTTGGACGACTTTTCACCAAAAACATGGTCAAGGCTATGGAGTTTG TTGGTCTGGCTCCTAAAGGGAGTCTAAGAGTTCAAGATTTTCTAGAGAAGGCTGCAGATGGCCTAGTCGAAGGCGGAAAG AGAGAGATTTTCACACCAATGTACTTCTTTTTGGCACGGAAGCCATAG
Protein sequence (LotjaGi3g1v0120400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDLASNLGGKIDKAEVLSAVEKYEKYHVCYGGQEEERKANYTDMVNKYYDLVTSFYEFGWGESFHFAPRWKGESLRESIK RHEHFLALQLGLKPGEKVLDVGCGIGGPLREISRFSSTSVTGLNNNEYQITRGKELNRIAGVDKTCNFVKADFMKMPFPD NSFDAVYAIEATCHAPDAYGCYKEIFRVLKPGQHFAAYEWCMTDSFDPNNQEHQKIKAEIEIGDGLPDIRLTTKCLEALK QAGFEVIWVKDLAVDSSLPWYLPLDTSQFSLSSFRLTTVGRLFTKNMVKAMEFVGLAPKGSLRVQDFLEKAADGLVEGGK REIFTPMYFFLARKP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 335 | 335 | 2.9E-201 | – | |
| PANTHER | 1 | 335 | 335 | 2.9E-201 | – | |
| Gene3D | 18 | 273 | 256 | 4.5E-58 | – | |
| SUPERFAMILY | 39 | 335 | 297 | 2.48E-52 | ||
| ProSiteProfiles | 48 | 335 | 288 | 119.248 | ||
| CDD | 97 | 192 | 96 | 9.99856E-15 | – | |
| Pfam | 99 | 196 | 98 | 1.6E-20 | ||
| Pfam | 271 | 335 | 65 | 2.0E-31 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Steroid biosynthetic process | The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification. | ||
| Molecular function | Methyltransferase activity | Catalysis of the transfer of a methyl group to an acceptor molecule. |
Expression pattern of LotjaGi3g1v0120400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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