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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0121200 |
| Transcript ID | LotjaGi3g1v0121200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cation/H(+) antiporter; TAIR: AT3G52080.1 cation/hydrogen exchanger 28; Swiss-Prot: sp|Q8L709|CHX28_ARATH Cation/H(+) antiporter 28; TrEMBL-Plants: tr|A0A1J7IK18|A0A1J7IK18_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0121200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:14836331..14841227) extracted from Lotus japonicus Gifu genome v1.2.
CAAAGCTATTAATCACAGCCACTGGCTCTCTCAAAAAACTTTGATGCCAATTATTCATTAGCAAAACAAAACATCTGATA GCAAAATGCTGTCCTTGGTGGATGTGACTGCAACTGCAAAGAAGAAGAAGAAGAAGAAGCAAAACAAGATAATCTAAGAA AAAAATAATCAATCAATTCTTGGGTTGTCAATATGAATTTCACCTTAGCAACGGCTCCAACTATATGTGGGGACAGGCTA GGTAACCTCATTTTTGAAGTTGGTAATAACTTTGCTGTATTCACTGGGATGGTGATTACCAGCAACAGTTTGCATTTTGT TCTAAAGCATTATGCACAACCTCGCATCACTTCTGACATTATTGTAAGCTCCTAACTCTCAAATTAATCATTAGACATTA TTCAAATTCAAATTAGGGTTTTAAATTGCAGATTCAAATAGCACTGTGAGAACTTAAAATGAATGGTTTTGTAATTTGTG ATAATTGTAAGCTCCTCTCTCTCAAATTGGTCAATAGAGACATTAGTTAAATTAGGGTTTTAAATTGGGATGGGTTACTG TTGCCTAACACCCGCAAGTGTTGGCGCCAACGCCATACAATTGAGGGGACTTCAAAAGCCTTAACGTTGCAACTGCAATA CTGCAGACCGCAATGTGAGACCTAATGGGTGTCGGTCGCATTGGTTAAAGTTGACTGTTTGAACCCTAAGTAGGAGACGC ACTCTGGAGGAGACGTTTTGACCTTCACCACACCCTGGTCGAAAAAGATTGTCTCAAATAGTTGTGGTTAAAACCAAAAA TATAATATCACCATGAGAACTTCAAATGAATGATTTTGTGACGATTTTGCTCTTATTGATCTAGGTGGGACTAATTGCGG GCAACATAAGATTTGTTCATAAGCTTGTTGAGAAATTCAACAAATCTTTTGGATTCATCATTGATTTTGGCATGATGTGT TACATGTTCGCATTGGGCATAGAAATGGATCCTTTCTTTCTCTTGGAACGACCACGCAGGCAAGCTAAAGTTGCATATGC AGGAGTTATCTCAACTTTCCTCCTATCAGTTATTGTAACCCCACTGCTGATGTTCTTCCAAGGGGAAAACAAGCTTCTAG AATTCACATTCTTCCTCTCTTCTCTTGTTGCTAGCACAAGCTCCCCAGTCCTGACCCGTTTGATAACTCACCTCAAAATT GGGAAATCAGATATTGGGAAGCTTGTGATTGCAGCAGGGATGCACTCAGATTTCTTGAGCGCTTTGATTTTTTCTTTCGG CTACATCTTGGTTCCGTTGCCTCAAGTGTGCAACGACATGGAGAAAGATATTAGCCTTAAAGAGACCATTACCATGGGTG GTGCTGTTTTAGGGCAGGTAGTGTTCACAGCATTGGCTTCACCGTGTTTCATGAAGTGGGTTAACAATGAAAACCCTGAA GGAAGAGCCATGAAAGGTCCACATGTTGTGCTGTCAATTGCATTCTTGGTGTTAATGTGTGCCTCCTCCACTATGTATGA TTATAGTCCCATTTTCAGTGCTTTCTTGGTAGGGGTTTGTGTCCCTAGAGAGGGTAGAGTTTCTAAGTGGCTGATCACCA AAATCAACTACATGTTGACCACTATTTTCTTTCCTATTTTTTTCTTGTGGGTGGGGTATGAAGCTAATTTCAGTAAGTTT GAGATTCGTTCCGCCGAAACATGGTTACAATTACTTGCATTTATGGTAGTGGTAGTGTCTGGAAAAGTTATTGGGACAAT AGTTTCTGGGGCGGGCTTTCACTTGCCTGAATCAGTTGTAACAGGATTGCTCCTCACCACCAAGGGCCACTTGCATATCT ATTTAGCTATCAAAGTGGTAAGTCTTTATGCTCTAGATTTCCCTCTTCACTAATTAAATGCTCATTAGTATACCTATGTT TTTCACGAATTTGGGTTCCCTTGCGGGCAGAAAAATCCTAAATTCACACAATCAACGAATGCGAGCCATTCGGTCAAAAT CAGACTGCTCAGATTTGGAGCTTATCTGAGCCGTCCGATCTTGGTGAAACCTATGAGCAGTCAGATCTTGATTAAACGGC CAAGATTAATCTAATGCGTGAATTTAGGATTGCTCTGACTACGACTAAGGGAACTCAAATCCGCTGTTCACTTGGGCCCT GGGGTTTTCTAGCACACATTCTGGATTGACATGAATCCTTATATTTAAGATGGTGAAATCTCAGCATAACTGATGTCACT ACATGATTTCAATTACCCATGTGTGTGGCAAAACTCAAAAGGCACATCTTGTGTAAATTGACATTGCAGCATACTTTCCT TACAGTTAATAAAAGCATACTGTTATGTCAATGTGCTTAAAATTCAAAGTATTGAGCATTTTCCTTTGCGAATGATATTA AATGCATGTTCAGATATACGGTGGAACGGTGAAGTCAAAATCATGGTGGACAGCCACAAAAGCTAAATGAAGTTGCGTAT GTCCCTCATGATTTTTGCTCACCATGGTTTTTCGCGTGTATCCAAGCATGCACTAAATGTTGTAGCTGAGTGACCGAGTC TTGCTTGTTATGCATCTAAAAACTCAGATCATTATATGAACATACATGATCAGAGCATTATGCATCTAATGCCAGAAGGT AGTAGTTAACCTCATAAAAAGGTACTTTAGAAATTTGAATCTATATTTTAGTATGCAGTAGACAAAAATAACTTCTTAAT AGCTATATAATTATTTATTTACTTTTCAGAACTATCACACAAGTAAGTAACTGAAATCATGTTTGCCATTGGCTCATTCA TATCATGTTCTTCTGTGACCAGATGAGTTGTGGTGCTACAACTGTTTCCACAGGCATTGTGATCATAATTTCAATCTTTT TCACAATTGTGCCAGCCCCAGCAATTGTGGCACATATCATAAAACGTGCAAGGAAAAGGGCACCTACTCATCGCTTGGCC CTTCAATTGCTTGATCCCTCAACTGAGCTAAGGATCCTCCTCTGTGTTCAGGGACCTCAAAATGTTCCTGCTTCCATCAA CTTCTTGGAGATTTCAAAAGGGGCAGCAGACGCTGGTGTTCTGGTATATGTTGCAGACATGATTGAACTCACCGATGAAA TATCAGCCACGTTAGATAAGGATGAACGAGTGCACACAGCCACTGTCAAAGACAAGCAAATCATGGACATGAGGGAGAAC ATAACCAGCTCATTCCAAACCTATGTGGTAGACAGTGACAGCAGAATCACACTCAAAAGAACCATGGCACTCTCAACAAT CAATAACATGCCACAAGACATTTGTGTTTTAGCAGAGGACTTGATGATTGCCCTCATTGTACTGCCATTTCATAGGAGCC AGCATAAGGAAGGAACACTGGATGGTGGTAATCAAGGATTTAGATATGTTAACCGAAAGGTAAGGTCTCTAAAACTAGAA CTTATTATCTCTATCAGATTTTCACCTATTAATTGATCTACATGTTCGATATTGGCAAAAAGAAATAGCAACCGAGCTAA AGAACAAAAAGAAACCGAAGATTATTTACCTCTAGCATACATGTTACTACTAAACAGAAGATTGTTTTATCAGAGACAAC TTCATGATTCCAGCTTCTGTTCTTAAAATACAGTCAAAGGGCTATTTGGTTAGGTATAAGTATTAATTCATAAGCTAATA TGAAGTAACCCCAAAATAGTAGACAATAAGCATCTATCAGATAATAGCTTACTTGAGAAACTGAACTATTTGAGACACAG AAGTCCATCTAGAGTTTAAGTTAAACTAGTGTTCGGTGATTGTTGTCATATTTAACATAGATGTTTATTGAACAGGTACT GAGAAGTGCCCCTTGTTCAGTTGGTATTCTAGTAGACAGAGGCCTTGGAACCGAGCGTGTATCAAGATGTCAAGAAGCAC TAAATGTGGCAGTCATATTCATCGGTGGAAAAGATGACAGGGAAGCACTTTCCTACGCTGGCCGCATCTCACACCATCCA GGAGTGAAGCTCACAGTCATAAGATTCCTGGTAGAAAGCAGTGTAGAAGCCTCAAGACTAGCCGGGTACAGGATCATAAT CCCAGAGCAGGAGAAAGATACAAAGTTGGATAATGAGTTCTTTGCACAGTTCTACGAAAATCACGTTTCTGGGGGTCATA TTTCCTATGTGGAGAAGCATCTTGCTAATGCTGCTGAGACATTCTCCATTCTCAGGTCGTTTGAAGGGAAATACTCGTTG GTCATTGTGGGAAGGGAAGGTGGAGTGAACTCTATTTTGACAAAGGGCATGAATGATTGGCAGCAGTGCCCGGAACTGGG GCCAATAGGAGATGTTCTTTCAGGACCAGACTTCTCATTGACTGTCTCTGTATTGATCATCCAGCAACACAGAGTCAAAG GAGAAATAGATGGGTTAGATGATGACTTCTCTATCATATAAGTGTTAAAATGATAGTTTAGTCCTTAGCCATAAGAATCT AGGAAAAAGAAAGAAAGAAAGAAATAAGGGTAGGTAGAGTAGAAGTAGATACTGATTGTAGGAAAGAAATAGCAAACTGC TAGAGTCAGCTTTGAAAATTGTAAATATAACATCATCTTATTTTATTTCTGTCAAGAAAGGGGAATATATCTTAGAGAGG CTATTAGAATAGAGTTTATCATCAAGGTTTTAAATTACAACTGCGGACCGCGGTCATGCTTGTGATTGCATAACGATTTT TGCCATTACGGTTACATTAGATACTGCAACGGTAGAGACTGCAATGTATCTGTGACACTTATGGTGGGCTTTATTCACAA CTTTGCACAAGTTATATTAAAACCAGATTTAAAGCCATGTCTTGTGTGGTTGCCTTAACCATGACCAAAATAATCTTTGA TACTTCTCTTTGTCCCT
CDS sequence (LotjaGi3g1v0121200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATTTCACCTTAGCAACGGCTCCAACTATATGTGGGGACAGGCTAGGTAACCTCATTTTTGAAGTTGGTAATAACTT TGCTGTATTCACTGGGATGGTGATTACCAGCAACAGTTTGCATTTTGTTCTAAAGCATTATGCACAACCTCGCATCACTT CTGACATTATTGTGGGACTAATTGCGGGCAACATAAGATTTGTTCATAAGCTTGTTGAGAAATTCAACAAATCTTTTGGA TTCATCATTGATTTTGGCATGATGTGTTACATGTTCGCATTGGGCATAGAAATGGATCCTTTCTTTCTCTTGGAACGACC ACGCAGGCAAGCTAAAGTTGCATATGCAGGAGTTATCTCAACTTTCCTCCTATCAGTTATTGTAACCCCACTGCTGATGT TCTTCCAAGGGGAAAACAAGCTTCTAGAATTCACATTCTTCCTCTCTTCTCTTGTTGCTAGCACAAGCTCCCCAGTCCTG ACCCGTTTGATAACTCACCTCAAAATTGGGAAATCAGATATTGGGAAGCTTGTGATTGCAGCAGGGATGCACTCAGATTT CTTGAGCGCTTTGATTTTTTCTTTCGGCTACATCTTGGTTCCGTTGCCTCAAGTGTGCAACGACATGGAGAAAGATATTA GCCTTAAAGAGACCATTACCATGGGTGGTGCTGTTTTAGGGCAGGTAGTGTTCACAGCATTGGCTTCACCGTGTTTCATG AAGTGGGTTAACAATGAAAACCCTGAAGGAAGAGCCATGAAAGGTCCACATGTTGTGCTGTCAATTGCATTCTTGGTGTT AATGTGTGCCTCCTCCACTATGTATGATTATAGTCCCATTTTCAGTGCTTTCTTGGTAGGGGTTTGTGTCCCTAGAGAGG GTAGAGTTTCTAAGTGGCTGATCACCAAAATCAACTACATGTTGACCACTATTTTCTTTCCTATTTTTTTCTTGTGGGTG GGGTATGAAGCTAATTTCAGTAAGTTTGAGATTCGTTCCGCCGAAACATGGTTACAATTACTTGCATTTATGGTAGTGGT AGTGTCTGGAAAAGTTATTGGGACAATAGTTTCTGGGGCGGGCTTTCACTTGCCTGAATCAGTTGTAACAGGATTGCTCC TCACCACCAAGGGCCACTTGCATATCTATTTAGCTATCAAAGTGATGAGTTGTGGTGCTACAACTGTTTCCACAGGCATT GTGATCATAATTTCAATCTTTTTCACAATTGTGCCAGCCCCAGCAATTGTGGCACATATCATAAAACGTGCAAGGAAAAG GGCACCTACTCATCGCTTGGCCCTTCAATTGCTTGATCCCTCAACTGAGCTAAGGATCCTCCTCTGTGTTCAGGGACCTC AAAATGTTCCTGCTTCCATCAACTTCTTGGAGATTTCAAAAGGGGCAGCAGACGCTGGTGTTCTGGTATATGTTGCAGAC ATGATTGAACTCACCGATGAAATATCAGCCACGTTAGATAAGGATGAACGAGTGCACACAGCCACTGTCAAAGACAAGCA AATCATGGACATGAGGGAGAACATAACCAGCTCATTCCAAACCTATGTGGTAGACAGTGACAGCAGAATCACACTCAAAA GAACCATGGCACTCTCAACAATCAATAACATGCCACAAGACATTTGTGTTTTAGCAGAGGACTTGATGATTGCCCTCATT GTACTGCCATTTCATAGGAGCCAGCATAAGGAAGGAACACTGGATGGTGGTAATCAAGGATTTAGATATGTTAACCGAAA GGTACTGAGAAGTGCCCCTTGTTCAGTTGGTATTCTAGTAGACAGAGGCCTTGGAACCGAGCGTGTATCAAGATGTCAAG AAGCACTAAATGTGGCAGTCATATTCATCGGTGGAAAAGATGACAGGGAAGCACTTTCCTACGCTGGCCGCATCTCACAC CATCCAGGAGTGAAGCTCACAGTCATAAGATTCCTGGTAGAAAGCAGTGTAGAAGCCTCAAGACTAGCCGGGTACAGGAT CATAATCCCAGAGCAGGAGAAAGATACAAAGTTGGATAATGAGTTCTTTGCACAGTTCTACGAAAATCACGTTTCTGGGG GTCATATTTCCTATGTGGAGAAGCATCTTGCTAATGCTGCTGAGACATTCTCCATTCTCAGGTCGTTTGAAGGGAAATAC TCGTTGGTCATTGTGGGAAGGGAAGGTGGAGTGAACTCTATTTTGACAAAGGGCATGAATGATTGGCAGCAGTGCCCGGA ACTGGGGCCAATAGGAGATGTTCTTTCAGGACCAGACTTCTCATTGACTGTCTCTGTATTGATCATCCAGCAACACAGAG TCAAAGGAGAAATAGATGGGTTAGATGATGACTTCTCTATCATATAA
Protein sequence (LotjaGi3g1v0121200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNFTLATAPTICGDRLGNLIFEVGNNFAVFTGMVITSNSLHFVLKHYAQPRITSDIIVGLIAGNIRFVHKLVEKFNKSFG FIIDFGMMCYMFALGIEMDPFFLLERPRRQAKVAYAGVISTFLLSVIVTPLLMFFQGENKLLEFTFFLSSLVASTSSPVL TRLITHLKIGKSDIGKLVIAAGMHSDFLSALIFSFGYILVPLPQVCNDMEKDISLKETITMGGAVLGQVVFTALASPCFM KWVNNENPEGRAMKGPHVVLSIAFLVLMCASSTMYDYSPIFSAFLVGVCVPREGRVSKWLITKINYMLTTIFFPIFFLWV GYEANFSKFEIRSAETWLQLLAFMVVVVSGKVIGTIVSGAGFHLPESVVTGLLLTTKGHLHIYLAIKVMSCGATTVSTGI VIIISIFFTIVPAPAIVAHIIKRARKRAPTHRLALQLLDPSTELRILLCVQGPQNVPASINFLEISKGAADAGVLVYVAD MIELTDEISATLDKDERVHTATVKDKQIMDMRENITSSFQTYVVDSDSRITLKRTMALSTINNMPQDICVLAEDLMIALI VLPFHRSQHKEGTLDGGNQGFRYVNRKVLRSAPCSVGILVDRGLGTERVSRCQEALNVAVIFIGGKDDREALSYAGRISH HPGVKLTVIRFLVESSVEASRLAGYRIIIPEQEKDTKLDNEFFAQFYENHVSGGHISYVEKHLANAAETFSILRSFEGKY SLVIVGREGGVNSILTKGMNDWQQCPELGPIGDVLSGPDFSLTVSVLIIQQHRVKGEIDGLDDDFSII
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 26 | 26 | - | – | |
| PANTHER | 7 | 788 | 782 | 0.0 | – | |
| PANTHER | 7 | 788 | 782 | 0.0 | – | |
| TMHMM | 21 | 43 | 23 | - | – | |
| Phobius | 27 | 44 | 18 | - | – | |
| Gene3D | 27 | 430 | 404 | 1.2E-48 | ||
| Pfam | 43 | 420 | 378 | 2.3E-23 | ||
| Phobius | 45 | 55 | 11 | - | – | |
| Phobius | 56 | 72 | 17 | - | – | |
| Phobius | 73 | 77 | 5 | - | – | |
| Phobius | 78 | 101 | 24 | - | – | |
| TMHMM | 82 | 104 | 23 | - | – | |
| Phobius | 102 | 112 | 11 | - | – | |
| TMHMM | 113 | 135 | 23 | - | – | |
| Phobius | 113 | 135 | 23 | - | – | |
| Phobius | 136 | 140 | 5 | - | – | |
| Phobius | 141 | 165 | 25 | - | – | |
| TMHMM | 145 | 164 | 20 | - | – | |
| Phobius | 166 | 176 | 11 | - | – | |
| Phobius | 177 | 199 | 23 | - | – | |
| TMHMM | 177 | 199 | 23 | - | – | |
| Phobius | 200 | 218 | 19 | - | – | |
| TMHMM | 219 | 238 | 20 | - | – | |
| Phobius | 219 | 243 | 25 | - | – | |
| Phobius | 244 | 254 | 11 | - | – | |
| Phobius | 255 | 275 | 21 | - | – | |
| TMHMM | 258 | 280 | 23 | - | – | |
| Phobius | 276 | 303 | 28 | - | – | |
| TMHMM | 300 | 322 | 23 | - | – | |
| Phobius | 304 | 325 | 22 | - | – | |
| Phobius | 326 | 336 | 11 | - | – | |
| TMHMM | 335 | 357 | 23 | - | – | |
| Phobius | 337 | 364 | 28 | - | – | |
| Phobius | 365 | 383 | 19 | - | – | |
| TMHMM | 367 | 386 | 20 | - | – | |
| Phobius | 384 | 417 | 34 | - | – | |
| TMHMM | 399 | 421 | 23 | - | – | |
| Phobius | 418 | 788 | 371 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cation transport | The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Solute:proton antiporter activity | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out). | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi3g1v0121200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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