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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0124600 |
| Transcript ID | LotjaGi3g1v0124600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | C2 calcium/lipid-binding and GRAM domain protein; TAIR: AT5G48060.1 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; Swiss-Prot: sp|Q9FL59|FTIP1_ARATH FT-interacting protein 1; TrEMBL-Plants: tr|I1KTK3|I1KTK3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0124600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:15253353..15256340) extracted from Lotus japonicus Gifu genome v1.2.
CATCAATACTATGTGTTCTTCTATCTTTTGCATTCTTAAGTAGAATTCCGTTGCTTCAGATTCGAATATTGGGTTACTTG CTGATAGCCACTTAAGCTTTAGCTTCCTGTGACAGAAACAGTAGCAACAAAAGGATATGAAGCTCTTAGTAGAGGTCATA GATGCTCATGATCTTATCCCCAAATGGTGAAGGATCAATAAGTTCATTTGTGGGAGTAGAACAAACACCAAGTTTTTCCA CTCAACAATGATTTCAATTAAGAGAAGACAAAGAGGTACTCCAATCACAATGCAATCAATAAACCCTCAAGTCCAAGCCC ATCCTAGCAGCCATGATGAAGAATACAATGTGAAGGACACCACCCCGCAGCTCGGGGAGCGGTGGCCTAATGGTGGAAGA GGGTGGGCGAGTGGCGGAGAAAGATCAACAAGCACATACGACCTTGTTGAGCAGATGTTTTATCTGTATGTTCGTGTGGT GAAAGCCAAAGGTCTCCCTCCCGGTACTCTCACCTCGAGCTGTGATCCTTACGTGGAGGTGAAGCTGGGGAACTACAAAG GAAGAACAAAGCACATCGAGAAGAAATTGAACCCGGAGTGGAACCAGGTCTATGCTTTCTCCAAGGACCAAATTCAATCT TCTGTTTTGGAAGTCATTGTGAAGGATAAAGAAACGTTGGGGAGAGATGATTACATTGGAAGGGTGGCTTTCGACCTCAA TGAGGTTCCAACCAGAGTTCCGCCGGATAGCCCCCTGGCTCCTCAGTGGTACCGGCTCGAGGACCGGCGAGGAGAAGAGA AGGTGAGGGGTGATATCATGCTTGCAGTCTGGATGGGAACTCAAGCTGATGAAGCTTTCCCAGAAGCTTGGCATTCTGAT GCTGCCACAGTTTATGGGGAGGGTGTTTTCAACATCAGATCAAAGGTTTATGTTTCACCAAAACTTTGGTATCTAAGAGT CAATGTCATTGAAGCACAAGATGTGATACCAAATGATCGAAATCGCCAACCAGATGTGTTAGTCAAAGCTCAATTGGGCA ACCAAGTGCTGAGGACAAAGATATGTTCAGCTAGGACAACCACACCACTTTGGAACGAAGATTTGGTCTTTGTTGCGGCT GAACCATTTGAGGAGCAGTTGACAATTACCGTGGAGGATCGCGTTCACCCTTCAAAAGATGAGGTACTTGGGAAGATAAT CTTGCCATTGACCCTCTTTGAGAAGCATCTAGACCACAGGCCGGTCCATTCTCGCTGGTTCAATCTTGAGAAATTTGGTT TTGGAGTGCTGGAACCCGATAGGAGGAATGAGCAGAAATTCTCAAGCAGGGTTCACCTTAGAGTTTGCCTTGAAGGTGGG TACCATGTCCTAGATGAGTCCACTTTGTATGCAAGTGACCAGAGACCAACGGCGAGACAACTATGGAAGCAACCTATTGG AATGCTTGAAGTAGGTATTTTAGGAGCACAAGGGCTTCTTCCAATGAAGATGAAGGATGATAACCGCGGCAGCACGGATG CATATTGTGTTGCAAAATATGGCCAGAAGTGGGTCAGAACCAGAACAATTCTTGACACTTTTAGTCCCAAATGGAATGAG CAATACACATGGGAGGTTTATGATCCTTGCACTGTGATAACATTGGGGGTGTTTGACAATTGCCATTTAGGTGCAGTGGA AAAAGCAAAAGCTACTGGTGGTAGTGCAGTCCATGATTCAAGGATTGGAAAGGTAAGGATAAGGTTATCAACACTGGAAG CTAATAGGATTTACACCAATTCTTACCCTCTTCTTGTTTTGCACCCACATGGAGTTAAGAAGATGGGTGTGCTTCAATTA GCAGTGAGGTTCACTAACCTCTCACTAGCTAACATGTTTTACATATATGGCCAACCATTGCTACCAAAGATGCATTACTT GCGTCCTTTCACAGTTAACCAAGTAGACAATTTAAGGTTCCAAGCTATGAACATTGTAGCTGTGAGGCTTGGCAGAGCTG AACCTCCCTTGAGAAAAGAGGTAGTGGAGTACATGCTGGATGTTGATTCCCATATGTGGAGCATGAGAAGAAGCAAAGCT AACTTCTTCCGCGTCATGTCACTATTTTCCGGCTTGATTAATATGGGGCAGTGGTTCAACCAAGTTTGCCATTGGAAGAA CCCCATCACAACAGTTCTGGTTCATGTTTTTTTTCTGATACTGATTTGGTACCCTGAACTGGTTCTTCCAACTTTGTTTC TCTACATGTTCTTCATTGGCCTGTGGAACTACAGGTTCCGCCCAAGACACCCGCCTCACATGGATACTAAACTCTCTTGG GCAGAAGGAGTTCACCCGGATGAACTTGATGAAGAGTTTGACACATTCCCGACTTCGAGGTCGCATGATGTGGTTCGAAT GAGGTATGACAGGCTTAGAAGTGTTGCAGGTAGGATTCAAACAGTTGTTGGGGACATTGCTACACAGGGAGAGAGATTCC AATCTCTAGTAAGCTGGAGAGATACAAGAGCAACCAGCATCTTTGTAGTGTTCAGCTTTTGTTCTGCAGTGGTCTTCTAT GCAACACCGCCAAGGGTGGTGGCTCTGGTATCTGGTTTGTATTATTTGCGGCATCCGAAGTTTCGCAGCAAGATGCCTTC TGTACCAAGCAATTTCTTCAAGAGGCTCCCAGCTCGAACAGATAGCATGTTGTGATACATAGGTTAAGACTTCAGTTCTA ACTTTATTCATTTCCTGTTGTTTTTCTTCTGTTGTTGCAATTGTACTGTTTTAAGATCAAAACTCTCCGAGTGCTACTTA GCACAAGCTCTATAGGCCAGGTTAAGATCATGTATATTTATAACCCAAAAGCTTTATCCTCAGTGAAAAGTATTCAAAAT TTCAAATGGAGGTTATGTATATCATAGTTTGCCAGTTCTGTAAATTTATCAAGAGTCTCAATTACAAACAAGTTGTGTAA TGATGCAATCCACCAGTTATCATTTTGT
CDS sequence (LotjaGi3g1v0124600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTTCAATTAAGAGAAGACAAAGAGGTACTCCAATCACAATGCAATCAATAAACCCTCAAGTCCAAGCCCATCCTAG CAGCCATGATGAAGAATACAATGTGAAGGACACCACCCCGCAGCTCGGGGAGCGGTGGCCTAATGGTGGAAGAGGGTGGG CGAGTGGCGGAGAAAGATCAACAAGCACATACGACCTTGTTGAGCAGATGTTTTATCTGTATGTTCGTGTGGTGAAAGCC AAAGGTCTCCCTCCCGGTACTCTCACCTCGAGCTGTGATCCTTACGTGGAGGTGAAGCTGGGGAACTACAAAGGAAGAAC AAAGCACATCGAGAAGAAATTGAACCCGGAGTGGAACCAGGTCTATGCTTTCTCCAAGGACCAAATTCAATCTTCTGTTT TGGAAGTCATTGTGAAGGATAAAGAAACGTTGGGGAGAGATGATTACATTGGAAGGGTGGCTTTCGACCTCAATGAGGTT CCAACCAGAGTTCCGCCGGATAGCCCCCTGGCTCCTCAGTGGTACCGGCTCGAGGACCGGCGAGGAGAAGAGAAGGTGAG GGGTGATATCATGCTTGCAGTCTGGATGGGAACTCAAGCTGATGAAGCTTTCCCAGAAGCTTGGCATTCTGATGCTGCCA CAGTTTATGGGGAGGGTGTTTTCAACATCAGATCAAAGGTTTATGTTTCACCAAAACTTTGGTATCTAAGAGTCAATGTC ATTGAAGCACAAGATGTGATACCAAATGATCGAAATCGCCAACCAGATGTGTTAGTCAAAGCTCAATTGGGCAACCAAGT GCTGAGGACAAAGATATGTTCAGCTAGGACAACCACACCACTTTGGAACGAAGATTTGGTCTTTGTTGCGGCTGAACCAT TTGAGGAGCAGTTGACAATTACCGTGGAGGATCGCGTTCACCCTTCAAAAGATGAGGTACTTGGGAAGATAATCTTGCCA TTGACCCTCTTTGAGAAGCATCTAGACCACAGGCCGGTCCATTCTCGCTGGTTCAATCTTGAGAAATTTGGTTTTGGAGT GCTGGAACCCGATAGGAGGAATGAGCAGAAATTCTCAAGCAGGGTTCACCTTAGAGTTTGCCTTGAAGGTGGGTACCATG TCCTAGATGAGTCCACTTTGTATGCAAGTGACCAGAGACCAACGGCGAGACAACTATGGAAGCAACCTATTGGAATGCTT GAAGTAGGTATTTTAGGAGCACAAGGGCTTCTTCCAATGAAGATGAAGGATGATAACCGCGGCAGCACGGATGCATATTG TGTTGCAAAATATGGCCAGAAGTGGGTCAGAACCAGAACAATTCTTGACACTTTTAGTCCCAAATGGAATGAGCAATACA CATGGGAGGTTTATGATCCTTGCACTGTGATAACATTGGGGGTGTTTGACAATTGCCATTTAGGTGCAGTGGAAAAAGCA AAAGCTACTGGTGGTAGTGCAGTCCATGATTCAAGGATTGGAAAGGTAAGGATAAGGTTATCAACACTGGAAGCTAATAG GATTTACACCAATTCTTACCCTCTTCTTGTTTTGCACCCACATGGAGTTAAGAAGATGGGTGTGCTTCAATTAGCAGTGA GGTTCACTAACCTCTCACTAGCTAACATGTTTTACATATATGGCCAACCATTGCTACCAAAGATGCATTACTTGCGTCCT TTCACAGTTAACCAAGTAGACAATTTAAGGTTCCAAGCTATGAACATTGTAGCTGTGAGGCTTGGCAGAGCTGAACCTCC CTTGAGAAAAGAGGTAGTGGAGTACATGCTGGATGTTGATTCCCATATGTGGAGCATGAGAAGAAGCAAAGCTAACTTCT TCCGCGTCATGTCACTATTTTCCGGCTTGATTAATATGGGGCAGTGGTTCAACCAAGTTTGCCATTGGAAGAACCCCATC ACAACAGTTCTGGTTCATGTTTTTTTTCTGATACTGATTTGGTACCCTGAACTGGTTCTTCCAACTTTGTTTCTCTACAT GTTCTTCATTGGCCTGTGGAACTACAGGTTCCGCCCAAGACACCCGCCTCACATGGATACTAAACTCTCTTGGGCAGAAG GAGTTCACCCGGATGAACTTGATGAAGAGTTTGACACATTCCCGACTTCGAGGTCGCATGATGTGGTTCGAATGAGGTAT GACAGGCTTAGAAGTGTTGCAGGTAGGATTCAAACAGTTGTTGGGGACATTGCTACACAGGGAGAGAGATTCCAATCTCT AGTAAGCTGGAGAGATACAAGAGCAACCAGCATCTTTGTAGTGTTCAGCTTTTGTTCTGCAGTGGTCTTCTATGCAACAC CGCCAAGGGTGGTGGCTCTGGTATCTGGTTTGTATTATTTGCGGCATCCGAAGTTTCGCAGCAAGATGCCTTCTGTACCA AGCAATTTCTTCAAGAGGCTCCCAGCTCGAACAGATAGCATGTTGTGA
Protein sequence (LotjaGi3g1v0124600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MISIKRRQRGTPITMQSINPQVQAHPSSHDEEYNVKDTTPQLGERWPNGGRGWASGGERSTSTYDLVEQMFYLYVRVVKA KGLPPGTLTSSCDPYVEVKLGNYKGRTKHIEKKLNPEWNQVYAFSKDQIQSSVLEVIVKDKETLGRDDYIGRVAFDLNEV PTRVPPDSPLAPQWYRLEDRRGEEKVRGDIMLAVWMGTQADEAFPEAWHSDAATVYGEGVFNIRSKVYVSPKLWYLRVNV IEAQDVIPNDRNRQPDVLVKAQLGNQVLRTKICSARTTTPLWNEDLVFVAAEPFEEQLTITVEDRVHPSKDEVLGKIILP LTLFEKHLDHRPVHSRWFNLEKFGFGVLEPDRRNEQKFSSRVHLRVCLEGGYHVLDESTLYASDQRPTARQLWKQPIGML EVGILGAQGLLPMKMKDDNRGSTDAYCVAKYGQKWVRTRTILDTFSPKWNEQYTWEVYDPCTVITLGVFDNCHLGAVEKA KATGGSAVHDSRIGKVRIRLSTLEANRIYTNSYPLLVLHPHGVKKMGVLQLAVRFTNLSLANMFYIYGQPLLPKMHYLRP FTVNQVDNLRFQAMNIVAVRLGRAEPPLRKEVVEYMLDVDSHMWSMRRSKANFFRVMSLFSGLINMGQWFNQVCHWKNPI TTVLVHVFFLILIWYPELVLPTLFLYMFFIGLWNYRFRPRHPPHMDTKLSWAEGVHPDELDEEFDTFPTSRSHDVVRMRY DRLRSVAGRIQTVVGDIATQGERFQSLVSWRDTRATSIFVVFSFCSAVVFYATPPRVVALVSGLYYLRHPKFRSKMPSVP SNFFKRLPARTDSML
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 612 | 612 | - | – | |
| PANTHER | 19 | 815 | 797 | 0.0 | – | |
| PANTHER | 19 | 815 | 797 | 0.0 | – | |
| MobiDBLite | 21 | 59 | 39 | - | – | |
| Gene3D | 67 | 213 | 147 | 1.1E-32 | ||
| CDD | 72 | 198 | 127 | 2.59813E-66 | – | |
| Pfam | 72 | 175 | 104 | 1.2E-21 | ||
| SMART | 72 | 169 | 98 | 7.4E-20 | ||
| SUPERFAMILY | 72 | 212 | 141 | 1.49E-34 | – | |
| ProSiteProfiles | 73 | 154 | 82 | 15.607 | ||
| Gene3D | 222 | 367 | 146 | 1.1E-22 | ||
| SUPERFAMILY | 234 | 389 | 156 | 3.87E-30 | – | |
| Pfam | 234 | 340 | 107 | 1.0E-19 | ||
| SMART | 235 | 335 | 101 | 5.3E-10 | ||
| CDD | 235 | 387 | 153 | 8.33803E-78 | – | |
| ProSiteProfiles | 236 | 318 | 83 | 11.626 | ||
| Gene3D | 380 | 539 | 160 | 9.9E-25 | ||
| SUPERFAMILY | 398 | 552 | 155 | 2.08E-26 | – | |
| Pfam | 399 | 515 | 117 | 3.3E-22 | ||
| SMART | 399 | 512 | 114 | 4.1E-12 | ||
| CDD | 400 | 532 | 133 | 4.49045E-65 | – | |
| ProSiteProfiles | 400 | 497 | 98 | 9.702 | ||
| TMHMM | 526 | 548 | 23 | - | – | |
| TMHMM | 611 | 630 | 20 | - | – | |
| Phobius | 613 | 631 | 19 | - | – | |
| Phobius | 632 | 642 | 11 | - | – | |
| Phobius | 643 | 675 | 33 | - | – | |
| TMHMM | 650 | 672 | 23 | - | – | |
| Pfam | 660 | 815 | 156 | 7.1E-78 | ||
| Phobius | 676 | 757 | 82 | - | – | |
| Phobius | 758 | 787 | 30 | - | – | |
| TMHMM | 758 | 780 | 23 | - | – | |
| Phobius | 788 | 815 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0124600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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