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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0126000 |
| Transcript ID | LotjaGi3g1v0126000.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Emsy N terminus domain-containing family protein; TAIR: AT5G13020.1 Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein; Swiss-Prot: sp|F4K2F0|EML3_ARATH Protein EMSY-LIKE 3; TrEMBL-Plants: tr|A0A072VJ16|A0A072VJ16_MEDTR Emsy amine-terminus (ENT)/plant tudor-like domain protein; Found in the gene: LotjaGi3g1v0126000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:15430737..15437898) extracted from Lotus japonicus Gifu genome v1.2.
AACAGGTGCAATAATTTTAATTTTTTTTAGTTTTAACTAACGTGAACAAAAAGGTAACGAATTAAAAAACGCGCGAGCGA GTCGCATCCACAATAACTCAGCAACCGAGTTCGACTCACCAAATTGAGATTCTACACCACTACTCTACACAGAGCTTCGA TCTTCCCAATTCCAATCCACCTTCATCGTTTCCTTCATCAACCACACTCCTTCTTCTTCCATTGTTGCCACTTCTTCAAT TTCGGTGGAAAAAGGGGTTTTGTTTTCTGCGTAATTTTCTTGGATCTGGGTACTCTGCATTCCCATTCAAACTGGCTATG GATTACGAACCCTACGATAGTAGCGGTGAGCTTCATTCTAAATTTCTTCCTTAATTCTGTTTTTTTTTCCATATTGTAAC GATAATTTGAAGCTTTCTCTTTTTTCTGTTCATTCTCTCTGTTTTTCAATTTTAGGGTTAGGGCTTTGTTTGAATTTCTT TGCCACTGTTTTGATATTTTCATCCAAAACAAATGGGTTAGCATCAAAATTCAATTTTTTTCATGCTGTGCTTGCAGAAT GAGTGAATTAGCTGTGTTTGATTAGTGAGCAAAATACCAATACATGTTTTACTTTGTTAATATCTCAAGGGAATTAAGTG ATTGGTTATTTTCTTGTCAAAGTTAATAGCTTTTCTTCCTATGGACACTTTGGGTAGCAGAGAGGGGTGGAAGGTGCCCT TGAGGCACTAGGGGGTTTAAACAACTTCGAGACGCGCCGAGAAGCTCAAAAGATGCATTAGAAATAAAAGAAGAGAGTTG TAAATTATTAGGCTGTTTTGCCAAGCCTCTTGGTTTCTTGCTTTAGTTGGCGATATGGCACTAAAGGCACGCCTCACCTC AGCACGAATGGCACGCCAAAGGTGTCAGAAGTGTGAGACTGACTGAAAGGTCTGCACCTCAATCAGGAAGGTGCTGAATG CTTCTAGGGCGTTGGACTGTACTGGTTGAAAGTTTGACTGAGAAGTAGTTTATTGAAACTTTCAGACTCAGAAAGAAGAA ACGTGCTGAAGTGTTTATCCTGCTGTTAGCAAGGATTGAGTTTTTCTAAATCAAATGTTAACGCACTCAAGATTCTTTCA TGTCTATATCTTTTACGCCCCTTTTTTTAGACACAAAACTGTCTAAGTGATTCCCTGTGCCATTCAGTGTAACACTGACA TGTAGCAGACTGATTGCATTGTCCAATGGTGAAAATTTGTTGCATTGACAATATTTTTTCCCCTAACTGCAATATCTCTT ACCTAGTGAAATGTTGTCCTCAGTTTCCATTTTTGAATGCTACGCTAGTATACAATTCCTTATGGCCTTAGTAAGATATC GTTATGCATATTTTAGGATCTATGGTCCTGTCTGGCTGCTATTCTCATATCCGTTCACTTGATCCGATGATTGCAGGAAC TGATGATGACCTTCCACCAACACATCAAAATAGAATTCCCAGAGGGGCACGTCTTGCTGGGAATGGAAGATCTGCTATAG GTTCAATTTCATACCCCAGGATGTATGGTGAAATTGATATGGAAACTCAAATTCACCAACTTGAGCAGGAAGCTTACAGT TCAGTTCTGCGAGCCTTTAAGGCTCAAGCTGATGCCATTACTTGGGTACATTTTATTATTTTGTTTTCACATATCTAATA TTTTTTAATTTGTTTCACCTGGTTTAAATGACTGCTAAGTGGCATGCATTTTCTTCAGGACAAGGAAACTTTGCTTACAG ACCTAAGAAAAGAATTAAGATTATCAAATGAAGAACACAGGGAACTTCTGGGCCGTGTTAATGCTGATGATGTCATACAT AGAATAAGGTCTGATAAATTCTCAAAACATGGTTTCTTTTGGTCAATTGTTTAGAAGTCAGACTCTTACTTTTTCCGTAG ACACATTCTATCTTTTTTTATCAGTATTTCATTTCGTGTTGATTTTAGGGAGTGGAGACAGACAGGAGGCCATCAGCCTG GTGTGCTGAGTACTGGACTGGCTATTCATGATTCAATTCCGAGTCCCACAGTCTCTGCATCCCGTAAGAAGCCGAAGATA ACACCCTCTGTACCATCACAATCTTTTGGTGGGCCTTCTCCTCCATTTCACTCGCAACCCTCTGCTGCATCCCTCCAGCC ATCTTCTGTTGCAAAACGTGGATCTGTCCCTGGATCTAAGGGAAAGAAGCAAAAAGCTGTTAGTAAATGTTATAATATTT ATTTTTTTAAAGCTCAAAGATATATATAATATATAGTAGAAAGTGTTGAGAAACAACCCCTTCTCAACATGGGTACAGTA ACCTAACAGCAAAAAGCTGATAAAACTCTGCCACTATAGCAAAACCCACGAGAAACAACCAAGGAGCACGAAAAAGTGCT TAACACCGATCCAAAACCTAAAGTGTTTACCCCCATTGAAATCGAAAAGCGAGAAAACCCGCTCGATACCCACCTTAAAC ATTAAATTCCTCTACATTGCTCTTTATTTATCTACACCGAGCTTGGTCTTATCCCAATCTGAGCTGTTGAAAAAATTATT TGTCACTAACAAAAAATACATACATCAGCAACATTAAGTTTCTTATTTTGGCTTTTATTTGTAGGGCCAAGTCTTGACAG GTGTATCTTCAAAAAAACAATATCCTTTATTAGGATCAGGTGGAAGGAATCAAGTGCCAGATAGAGTTACTTCTGGTACT GTTATGGCTGAGCTTGCCGAGGGAGTTGCATCATTTGATTCAGTGATCGGTAGGAGAGTACGAACAAGATGGCCTGATGA CAATAACTTCTATGAAGCTGTTATCTCTGACTACAGTCCAATTGATGTACTTGCAGCCCCCCAATTATTTGAAAATTAGT TTGTCAATGTCAATTAGTTTATAGCTGACATGTTTACTTTTATTTTTAACTTTTCAGGGTCGACACAATCTGGTCTATGA CATGGGGAGGGCAAATGAAACATGGGAATGGGTTAATCTGTCCGAGGTATATCTGCTACCGATAACTGTGGTGTAATTCT TGTGTGCTTTGTTACGATTAATCCCCTAGCAATAATTTATCATTGCAAAGCTATGGTTCTAGAAAACTTAGGGACTTCTT AAGAAAACTTAAGTGGCATTTAAGCAGTACGAGGACAAAGAGAAGTTCATGTTCTTTTGACTTTCCTCTTTCACCCCGAT GGTCCCACCAGGGCCACCGCTCAAGAAAAAAAATTGCTGAGTTCTGATAATGTTCCATGTCACTTTAAAATGAGTTTGTT GTCTTTTTTCTATGATCTGGTTTCTAGTCTTCTCATGAGCCCTAAAAGTGATTTACCATGAATGTTGCAGAAGAAAGTTC ATTTTATCAACTAAATAATATTTAATTATGAATATTTCATATTTTTAGAACAAAGTTCTTTAACATTGCTAAAGTAGTCT ATTAGGAATTTAAATAAATTCATGCTTGTGTGATGGTTTACTTTTTCAGATTTTGGGTATATGATATATCTAAAATGATT GAGAACGCTTTGTTATTTAACATCTTTGGCTAGAGTTCTGTAGAGGTTTTAATGCCTTTGGCTGTGCGTTAGTACAAAGA ACAAATGGTCTTTATTGTTTATTATTATCATAAAAAGATTCTGAAGCCTCTGAATTAATTTATTATCAATTTGTCAATAT CAGCTCTAAGGGCTGATGATAAGAATACAAAAGTTGAGAGCTTTTATTAGGAAAGGAAAAGTTTGTTTCACTGGATGTGC AAAATTGCAATCAATGCTTCATTTCCCAATAAAAACTTTTTACTTTTGGATTCTAATCATCAGGCTAAGGACTGATGTTA ACAATACCAATTTATGAATTGGTATCTAACCTAAAATCGTTAAACCTCAATGTCTAACAATTTAATTTGCGCCTAACCAT ACATGGGAGATTAGTCTCTTAGTCTTACCTAATAGGTAAGGAGATACTAAGATTCTAGGGAATAAAAATGAGAGTTAGGG TGTGTTGGATAAAACTAAAAAACTTTTAGGCTTTAGCACTGTGTCCTGATTTAATAATCGTGAAAAACTAGGCACTAAAT TAGTAATGTCTATACTGACACTGGTATGACACCTGTCACCATACATAAATAATAGCATGTCCCAGTGCTATATCCTTCTA AGGTGCTGCTTAATATGGTAATTGTTTTTGGAGGGGATCTACTAAATGGACCAATGAAGCACTATCCTGTCAACAGCTCT TTATCTTAGATTTCTTTTAGTTGGTTTGAAGCACAACATCTTTAGGACTTAGTCTTAGGTACTCCACATATACCTTAAAA TATCATATATGCACTGCTTTTGATCCTTTGTCTCTTTCTCAGTTCTAAACCAATGTTCAACTGAGCACTGTGGGAACAGG GAGAATGGAAATGCATGATTTAAAATGCTAAAATTGTTTTAAAGGATACTAGCAGGCATTTAATATAATGAAATTGACTA TACTGATGAAATATATTTTCACTTAAAATGTCAAGTAAGGAAATGACTGCTCTAAAATATTGTTAATGATCTTGTGTTGA ATATTGTCAGTTTTTGTTTACTTAATATCACTTTTGGCACGTAGTACAACCTTTTCATTTTCAGCACCAAATTGAGATTT CAAACTGGGCTAATCTAGGAATCAGTATATAATGTGGTATCATGTCTGCATTAATGGCTGCAGCTACTGGTACCATATGA AAAGAAATATATACTCAGATAAACAGAATTTTGACTTTTTAAAACTTTCCCTATATACCCTGAATTCTGGTGCTTGTTTG ATTTTCATGGGATTGAAGCATTGCTCCTTATTTATCTTGAATGCTCAATAATATTTAGAATGTGGATTTGCCATCTGCTT GATATGCTTAGCACTTCTTGGCACTATATTATTCTAGCTCCTTATATACATTGTTTTGTAAATGCAGATCTCTCCTGAAG ATTTTCAGTGGGTAGGTGAGGATCCCGGTATCAATAATCATGGGGGTTTTGGTGCATCTGGTCGTGGGATGAATGGGTCT ACAGGACGTGATAGTGTTCCAGGAGCTGGAAGGGGTAGAGGAGCCACGAAGGGCCAATCCAGAAAAAACTTTTTGCCATC ACAGAATGGAATAGGAAAGAAGGCCCCAGATGATATACAAATACTTCACACTGAGACACTGGTCAAAGAGGTGACTGAAT AGTTCAATCAAAATACTCTTTGATCTGCGATTGTTTGATCTTTTTATGGCACATATTTAAATTCCCAGTGAACTTGCTAG GTGGAAAGGGTATTCAGTGCAAATCATCCTGATGCACTTGAAATTGAGAAAGCCAAGAAAGTATTGAAGGTAAGGGTGTA TTTTGAATGCGGTCTGCCATTTCTTACACTTCCAGCTACTGATTTTTTTTATTCTCTAGCAAATGGTGTGTACAAATAAT CATTAATGAATTAAATGCAGGATCATGAGCAGTCTCTTATTGATGCACTTGAAAGAATTGCAGATCTTTCTGATGGTGAA AGTGGTACTTCTCAATATTCATACCAGATTGCAGTACTATCTGACATTTCTTTCGTCTAAAATATTAGAATATTGTGGAC GTTATTTACGTGCTGAGTATAGGAATTTGCATCGGTTCAGTTCTAGATTTTTGTATATGCGATTTGAATTGAATTACACG TTATAGGAATTTCGGTGTCTATAAGGAATTTTGTTCAGCACTAGATTAGTTTGGTCGGTTTGTAAAGTTCACTTCTGAAA GCTAGCATTTCACCATATGCCTGGTAATCTGCAAATTTGAGTGTAAATAGGAGAGAAGTACAATGTTTTGGGATGAAAGG ATTTGATCCACTGATTATTATGTGTTGCATGTGTGAAGTTGTTTCGATTCCATATTTTTCACTTCCCTTTTTAAGCTATT TAATTTCAAACAATCACAGCCTAAGTGTCTAGTGATGCTAATCACTCTATTTTTAGAAGCATGTCGTCATCAAAGCATGA AATGATAAAAATACATTTCCCGTAATTACAATGTGAGTATTAATAAATTTATAGATGATGTTTCTGGTCCATTGTGCTAT TCAATGTTCCCTACTCGTTTCTTTGTACACTTCTTGATGTTCTTATTGTCTATACAGATGAGGCTGGTCACCATCTATCA CATGCTCAATCAATGGATCGAGAATGATGGAACAGCAACTTTGTACAATGGCAAAGGAGGCATTATGGCTGCTAACTCAT GGAGAAGATTGAACTTGTATTATGTCACAACAAAATTTCCCTGACAGATGATAGCTCTAGTCTTGGGTCATGTGCATTAG TCATTTAAGTAGGATGAAAATTATGTAGTTTCGTATTAGTTATTTATTGAGATTAATAATTGACTTAGGATCAGGTGATG CTATTATGTGTATAAGTTCTTGTACTTTTTTGTGTCAAATTATGGGTCCGCTCTGCGCTCTTCTACTAAGAAATCAGAAT AATGGTAGCAACAGATTTTTGTTTTTTTAAGTTTTAACACAGCAAATATTAAGTGGTTTGGGGTTAACCAGCATAAATGT GTGATTTTTTATCCCTTATCTTTTTACATTTATGCTATGTTTGGATGCAGAGTTGAAAATGAGAGGAAGGAACATAAGGG AAGAGATTATAAAAGGAAAATGGGGTGTTTTTCAAGTTGTTTCGATTGAGAGAAAATGGTGGGAGAATGAAAGAAAAGGT AATGGAAATGAGTGCAAGACATAATTACTATTTTACCCATCAAATTATTGTTTCAATATACATTTTATATCATAAAAAAT ATAATTATAATATTTTACACTAAATTATTATAATAAGATCATATTTCTACCTATTAAACCGGAGCTTGGGTCGTGGTTTC TATGCTCGGCAGCATGGGGGTGATCTTGTGTGCTGAGGTTCGGGCCCTCCTCCTCCTCCTGCTGCTGCTGCGTTGAAATC ATTACTCGTGTGTTGATCCTGCACAAGACAACCAGATTGGGCTCAACAGGTGAAGACTTCCCCACATCCAGCCGAACCAT TAATGGTTGAAATCATTACACCTACCTGGACAAGACAAGACACACTGTGAAGCCCATATTACCAGATGAATAAAGCACTT GCCTTAAACTCCACATGCATGAACTGCAACTGTGTAAGCGAG
CDS sequence (LotjaGi3g1v0126000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATTACGAACCCTACGATAGTAGCGGAACTGATGATGACCTTCCACCAACACATCAAAATAGAATTCCCAGAGGGGC ACGTCTTGCTGGGAATGGAAGATCTGCTATAGGTTCAATTTCATACCCCAGGATGTATGGTGAAATTGATATGGAAACTC AAATTCACCAACTTGAGCAGGAAGCTTACAGTTCAGTTCTGCGAGCCTTTAAGGCTCAAGCTGATGCCATTACTTGGGAC AAGGAAACTTTGCTTACAGACCTAAGAAAAGAATTAAGATTATCAAATGAAGAACACAGGGAACTTCTGGGCCGTGTTAA TGCTGATGATGTCATACATAGAATAAGGGAGTGGAGACAGACAGGAGGCCATCAGCCTGGTGTGCTGAGTACTGGACTGG CTATTCATGATTCAATTCCGAGTCCCACAGTCTCTGCATCCCGTAAGAAGCCGAAGATAACACCCTCTGTACCATCACAA TCTTTTGGTGGGCCTTCTCCTCCATTTCACTCGCAACCCTCTGCTGCATCCCTCCAGCCATCTTCTGTTGCAAAACGTGG ATCTGTCCCTGGATCTAAGGGAAAGAAGCAAAAAGCTGGCCAAGTCTTGACAGGTGTATCTTCAAAAAAACAATATCCTT TATTAGGATCAGGTGGAAGGAATCAAGTGCCAGATAGAGTTACTTCTGGTACTGTTATGGCTGAGCTTGCCGAGGGAGTT GCATCATTTGATTCAGTGATCGGTAGGAGAGTACGAACAAGATGGCCTGATGACAATAACTTCTATGAAGCTGTTATCTC TGACTACAGTCCAATTGATGGTCGACACAATCTGGTCTATGACATGGGGAGGGCAAATGAAACATGGGAATGGGTTAATC TGTCCGAGATCTCTCCTGAAGATTTTCAGTGGGTAGGTGAGGATCCCGGTATCAATAATCATGGGGGTTTTGGTGCATCT GGTCGTGGGATGAATGGGTCTACAGGACGTGATAGTGTTCCAGGAGCTGGAAGGGGTAGAGGAGCCACGAAGGGCCAATC CAGAAAAAACTTTTTGCCATCACAGAATGGAATAGGAAAGAAGGCCCCAGATGATATACAAATACTTCACACTGAGACAC TGGTCAAAGAGGTGGAAAGGGTATTCAGTGCAAATCATCCTGATGCACTTGAAATTGAGAAAGCCAAGAAAGTATTGAAG GATCATGAGCAGTCTCTTATTGATGCACTTGAAAGAATTGCAGATCTTTCTGATGGTGAAAGTGGTACTTCTCAATATTC ATACCAGATTGCAGTACTATCTGACATTTCTTTCGTCTAA
Protein sequence (LotjaGi3g1v0126000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDYEPYDSSGTDDDLPPTHQNRIPRGARLAGNGRSAIGSISYPRMYGEIDMETQIHQLEQEAYSSVLRAFKAQADAITWD KETLLTDLRKELRLSNEEHRELLGRVNADDVIHRIREWRQTGGHQPGVLSTGLAIHDSIPSPTVSASRKKPKITPSVPSQ SFGGPSPPFHSQPSAASLQPSSVAKRGSVPGSKGKKQKAGQVLTGVSSKKQYPLLGSGGRNQVPDRVTSGTVMAELAEGV ASFDSVIGRRVRTRWPDDNNFYEAVISDYSPIDGRHNLVYDMGRANETWEWVNLSEISPEDFQWVGEDPGINNHGGFGAS GRGMNGSTGRDSVPGAGRGRGATKGQSRKNFLPSQNGIGKKAPDDIQILHTETLVKEVERVFSANHPDALEIEKAKKVLK DHEQSLIDALERIADLSDGESGTSQYSYQIAVLSDISFV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 424 | 424 | 9.7E-218 | – | |
| MobiDBLite | 1 | 30 | 30 | - | – | |
| PANTHER | 1 | 424 | 424 | 9.7E-218 | ||
| Gene3D | 39 | 126 | 88 | 3.8E-16 | ||
| SUPERFAMILY | 46 | 163 | 118 | 4.71E-37 | ||
| SMART | 51 | 124 | 74 | 1.7E-36 | ||
| ProSiteProfiles | 51 | 138 | 88 | 23.082 | ||
| Pfam | 53 | 121 | 69 | 5.9E-28 | ||
| Coils | 85 | 105 | 21 | - | – | |
| MobiDBLite | 122 | 225 | 104 | - | – | |
| MobiDBLite | 136 | 186 | 51 | - | – | |
| MobiDBLite | 201 | 215 | 15 | - | – | |
| Gene3D | 244 | 292 | 49 | 2.2E-5 | – | |
| SUPERFAMILY | 245 | 285 | 41 | 4.21E-7 | – | |
| MobiDBLite | 317 | 357 | 41 | - | – | |
| Coils | 392 | 412 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Defense response to fungus | Reactions triggered in response to the presence of a fungus that act to protect the cell or organism. |
Expression pattern of LotjaGi3g1v0126000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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