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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0127200 |
| Transcript ID | LotjaGi3g1v0127200.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | GTPase family protein; TAIR: AT4G10650.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|O82497|DGP2_ARATH DAR GTPase 2, mitochondrial; TrEMBL-Plants: tr|A0A151SWL8|A0A151SWL8_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0127200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:15649833..15658036) extracted from Lotus japonicus Gifu genome v1.2.
CTCCTTCTCCAGACTCCAACCGCGCTTCCACTCTGGTTCACTGCCATTTTTCTCCTTCTTCCCCCTTCCTCTTCTTGGCC ACACCCATTCTTCCATCTTCACAATTCTATTTTCACCCTTGCCTCTTCTAGGGAGAACCATTGTTAGTCATCTTTGAACA AAAGACCTTGCAAGATGCGAGCTCTGCAACCTAATTTTACCCGTATGTTTCACCCGACGCCGACCGAAACCGACCCATGC TCAGCCCTATGTGGAGTGTCAAATCCAATCCCCCTAATTTCCTAGTTCCTACGTTCTTCATCTCTCCTTAAAAAAAAAAT TACGTTCTTCATCTCTACGATTGCCCATCGCCTCTTCGCCGCCGCCGGCATCGCCGATTTCCACCGCCACTCCGTCATCA GTTCAACGCAGAAGAGTGGATTCGAAGCCTCAAAACGGTGCTGACTTGGAGCCAAGGGTACTCCCAAATTGCTCTTTGTG TAGGTCACCACTTTCATTCTTTACACCCCCTGACTTGGAGCTCTTCTTAGTTTGATTCTGTGTGTTCATAACCATAGCAT GATTTATACATAAATAAGATAATGACACTTTTGAAGTGGTTTTAGTTGTAATTTCTCTAGCAAAATGAGATACATGCTTT GAAAAGTTTAGATTTTGGTGTGTTGTTTGTTCATCTTTAGGAAACAGTTACTTGCCCTTTCTCCTCTAGTCTCTGCTAAT TTTAGCTGGAGTGGCTCTCCAACTAAATTTACATTTTAAGCTTACTTTCTTTCTTTCTTTTTTTACCTGTTATAGAAGAT GTGTACTGACCTTTAAATTTAAAGTGTGCTGAGTGCTAAAATGTAATGGGTTTGGTTTGATGTTTCAGTTTTCAGTTACC TTGAGAGAAATTTAAAGTCATATTCTTCCCTTTCTTATGCAAAAATCACACTTTTGTTTTTCTCTGTACTGTTATAATCT ATTCTGCTGAATCGCTATATCCGACTTGTAAGCTTAATCTTTGGTTAGGAATATATTCTTGTCATTTCCTGGTTTTCTAT ACTTGAATCTTAACAGATATTCAGCATCTATCTTATCAGCATTTGTTCTTCATGATGAGGAATATCTATATTTAGTTTAT TTAATTCAATGACTAATTTCCAGAGATACTTGTTAGCATTATTATAGTGCTTCCATGATCAGATTTAGAATAAATATTTT TGTTTCCTGCTGATTTTTTTCCAGAATTATAGGGCCGTGGGCTGGCCCTGCCCACAAGGCTTTTGGCCCCATGGGCTTTT TTGTGTGTGGGGCATTTTGGCCTTATGGGCTTTTTGGCCCTAGCCCACGTGAGGCTGGGCTGGCCCTAGGGCCAAATTGA CAGCTCTACCGACCATTAACCGAACTATTATTTGTGTAATAGGTTTACAGTGTCGATTCAATTTGAAATGGCAGCGGCAT CGCATTTGGGAAGACGAATAGGAACAGCTCTGAAGGAAATGATAGGATCCAAGAAGCGAGCACCATGGCACGATTCTCTC ATGGCTGCAGCTTCGACCGCCATTGTAGAAAGGATCCCTTTAGTCGATATCATCGTCCATGTTAGAGACGCTAGGGTACA TACACATTCACTCTTCTTCTTCTTTTGCTGCTATTTTCTTGCATTTCAATCACTCTTCCTTATATTCACTCACAGTCTTC AATTCCAGATTCCATCGTCCTCTGAGTGCCACTTGCTCAAAAACTGCCCTTCTTCCTCTAAGCAAATTATAGCGCTCAAC AAATCGGATCTCGCTTGTTCTTCAGGTTTGCAGGTCTGTTTTTCTTTTCTTTTTCTTTATGAAATGTGTTAGAAGTCCCA CATTGGCTAGATATATCGTCAAACACGTGTTTATAAAGGATAGAAAAACCCTCAACTCTTGAGCTAGCTTTTGGGTTGAG TTAGGCCTCCCTAATTCTAATAGAATGTGATTCTCAGTCTGCTGGAAAACATGGTAGGAGAGAAAATGGGGAGAAAGTGA TGAGAGAAGAAATTGAAATTGCAATAAGTATACAATGAAGTAATGAGCTTATTGAAGTAATGAACTAAGCTAATTAGAGT AACCTGCAATGCTACTTAGGCTAACCACCTAACCAAACAAGTAACTATAGCTAATACACTAAAAGGACAACCTACCTGAT GCTGTAAAATGCTCCTATGGTGGGGTCTAGAAAAGGGGTTGGACACATTTTGTGTACATTGTAGAGTCCCACCTTACATA TTCGTGCGGTTGATTCCACCACTCGGACCTGTGATATCGTAATCACACAGCAGCAACTCCGACTATTGCGCTGAGGCTTC CCTTCTAACCTATAGACTGAGCTAAAAACTTAACTAATGGAATTTAATCAAACTCAACCAATTCACCGTCTGCAGTAATG GGTGAATTGAGTTCCTTTTGAATTTATTAATTTATAACTTCTGATTTTTGTTAGTTTTATTCAATACTTTTTTATTTGTA ATTTGTTTTATGAATAGGCATGGACAGAATATTTTGCGGAAAACAACTGCATATCTTGTGGAGTCAATGCTCATAATAAG GAGAGCATCAGAAAGGTATACTGTAAGTTCCCTTTTGTGCATTCCTCTGTTGAGCCTCAGGGATGAAGGATCCTAATGTA AATATCCTGGTGTTTGACATTGTCTCTAATGTTAAGGGACATGGAACCAAGTTTCTAATTTTAAAACTTGCAGTCGTGCA GTTCATATATTAAATGGATATGAATTAATTAAAAACTCTCATTGATATTAGTTATTAGGAATCTGTATATCTGCAGCGTA ATGCATCCATGCTTTTGTGTGTAGCACGGTAAATTGATCTACATTAATAAGACCTTTTAAGTGCAATCTAAGGAATGACC AAAAAAAATTCAAATGCAGGAAAGACCAATTAGAGATTCTGAAAAATGTATTGTGTTTTTTCTATTCCTTTTGACCTTTT GCTACTTTTTGGTTTCTCTCCACCCTTTCCTTTTAGTAATTGTGTAGTTTTATTTTGCTTTGTTTCTTGTTTTGATGCAT GTTTTTTGTGGAAATAAGATTCCAAGCAAATGGATAGTGACTTGGGCTGATCGGACTTAGTGCAATTTCATATTTGGTGT TGGGTCGCCTATTTCCAAAGTAATTTTGTATGGACGTATAAAAAAATATTCTCCATGTTCTAGAAAAGGAAAAAATTCTC CGAAGAGTATGATAAATTTTGTGACTATATTGTCATAATTTTTGTTTCCCCCCTTTCTAATTGATTTAAGAGTTGTTCAT GAACCAATTTACTAATAGTGACTTTGCTTTGACAGTTTCTAACCCTTATACAAGGCCAGGTGAGAAAGTTAGGGAGAACT GATCATGCTAATTATACTGCAACAGTAATGTTAATTGGGATTCCAAATGTTGGTAAATCTGCACTTGTCAATGCCTTGCA TCAAGTGGGGAGAATTAGTGCAGCAGGTATTGAAATTACTATTACAATTCTAATGGAACAAGCTAAATGACATGCTTTAC TTTTCTGAAACACAAATGGTTGCAATTCACAATATTTTCATTTTTTATCTTATACTTTTTTTCTTTGGAAAATTTTATTT TATAGAAAAAGGAAAGTTGAAACATGCAACTGTGAGTCCAGAGCCAGGGGAGACTAAAGATATACGAAGTTTTAAGGTTA GTCGTTGAAACATGCAACTGTAGGTATCTCCACTTTCTTCCCCCAAGAATATGCTTCGTTACCCCACGTTCAAGCCATTA CGGTCCAATTAAAGCCCCAAAAGCTGGCCAAGCCTATTACTATGGTCTTAAACATGTATTCATGTAGAATTAAGACTGGT GTGCTAAATATGAGTTAGTTAGAGAGACACGTGCAATTTTTTGTTAAGAGGAGTGAGAAAGGAAGAATATGATGTAAAAA AGGAAAGGGGTTTTACGTGAGGACCAATTTTCGGGTTTTGACTCTTTTTGGAAGGCTTTAGAGCTTTGGCTTGGAGAGAT CCTCCATGGTTGGGGGTTGATGCTCTTCCTATCTATATCGCCTCACAATTTTCCAGTCAGTAAAACGGACTCCGTTTCTG CGATAAGAAGTTTGTCTTATACTCTTATTCCTATCAATTGGTGCTTTCATTGATAGATGCTTTTGCATGCAGTGCAGAAT GACCTTCACTCGAAGTCTTAATGTCTGATGTTGTTTGGCTGGCATGTCTTTGAGGAGTGCCCCTGAATCCTCTAGTACGT CCGTGAACCTTATCTCCTCCGTGAAGTTTGAAATAGATCTCCTTAGTGTGGTCAAACTTCCTGTAGTAAGTGCACTATCT ATCATCACGATTTCTCTTCACTAGAGATTCTCTGGAAGAAGTGGATCCTTTAAGCAATCCTTTCTAGAATCTAATGCCAA GTCATCAACTAATATGGAGTTCAATATTACTGTCCCCTGATTCTCCCAACTACGAAAAGTATGAAATACATTTGAGAGTG ACGGGAGGTTTTCCTTCCCCAATATCTGTACCCGAATTGGGCAGATAAGAACTTAAAGATTGTTGACTTCTCAATGAACT CAGTAAGAGCGGTATGATCATCAAGGCATTTCATTGTTAGATTATGATATTGATCTAACTCAGCCTAGTAACCATTTAGA GTTCATTTCATAATATTGAGTTGCAGAGAGGGTTCCCTGCCTTGTGCGGAAGATCTTATTCTTTAATTCATAACAGGCAG ATATAGATTTCCTGCTTCATAAAATAAGTCTTTGTCGAAGTCTCCCAAATATCCTGAGCAATAGGGAGAAACATACAGTT CCAGGTAATCTTTAGAATCATAGAATGCCACAGCCAAGTCATATTGAGAGAGTCCTCATCGAACCACATATCATAGCCAC AGTTTGTTTTTTCCGGAGCTTTGTTTTCCAGCCATCCCTTGAGAGTAGTGCTAAAGAGCTGAGCCCGTTGAAAATAGTTA ATCCCATCAAGGTGTTAAGATCCTTGAAGGTTGGGCAGATCATTACGAGTCAAGGGAGGAATAAAGGCTGTTGTTTTGTC TCCTGTCATGATTAATATGACATTTGCAAAGGAAGGAAATGGCACTATGCAGCCAAGAAAAGGACGAATGAAAAAGGCCA CAATGTGTATCTGAAAAAAATAGTAATGTATTTAAATGTTAAGTTAGCTAAGCTTGATGCTTATTTCATACTTTTTGTCA GCCAATAGCTTTCTATATTTACTTCCTATCCGTCTTTTCATGTATTAGTACATTTTTGTGCTTTTCATACTTATGAAACT TTGCTTTCCATTCAGATTGGTAGCCATCCCAATATTTATGTGTTAGACACTCCGGCCGTCTTGTCTCCTGAGGTTCCTGA TGTTGATGTCATATCTAAATTAATTTTAACAGGTATGTCTAATTAATATTCTTAACAGCCAAAAAATTTATGTTCTTCTT CCTTAGGTTTTCATTTTTTTCATAGCTTAAAATGAATATTATTAGAACTTAAATATAGAAGGGAATATTGGTTTATTTAA AAAGGAAGAATTTTTTTTGTTAAAAAAATAGGCAGCTACATTCTTGTGTTATGGTATTACTATCATGTACGATTTTTCTG TGTGGCTGTCGATGCGGGGTTTGATGAGCAAGTTGTGTGTTCTATAGAACACTTTGTGATGGTTATTCTCGGACAAAGTG CATAACAGACATTGCAAAGAGAGAAAAGTGGAGAAGCTATGAATTATCAACCTTACTAATTAAATTCTCATCCTTACTGT CTTATATCCAGTTTGTTATTGGGTTGTTCCCCAGGCCCTCGTGCACATATCCACCAAGGCCTTCATTGTGTCCAGCCTTG GGTTGCTTTCATTTTACCCATTATTTAGTCAAGCATCTTCATTATGCCACTGCCTCATAGTTTTCTTTGTTCAAGCTTGA CTGCCGCTAAGCACTAGTGAACACCACTGTCGACCACCAGCAAACCCACCAAGAGGATTGTCGCCCTATTTCAAGCCTGC CTTAGTTCCATTTCCAGAGTTAGTTGGTCTCAGATCTCAGCCATTTTGCGACAATTGGAAAGCCCTAATGTGGATTCACA TCTGGTGTGAGTTACGCAGGACCTGTTTGGTTGTGGAAATATTTACATGAGTGCCTTGTTTTTCTTTTGCTTAGTGGGCG CTACATTGTCTTAACAGAGAAACAGCTCTCAGTTTTGAGTGTCATGTTTGTTGTTTAGTTCAAAGGGTTTCACTTATCCT GACGATGGATTCATTTGATTGCGTTGACATTGTCGTTCTACATGATCATAGAGGAAGTTACATCTCTTTGCAAATCTAAG CCGGAACATCTGTGAGTACTCGCGTAGTCCTTTAGTAAGCTATGTGACATTTGTTCTCTAACCATGACCTAAGGGTTCTA GCTTCTTATCCTATAACACTTCTGGTCCTCATGATTATTGACTTTGGTGCTGCTGCTCATAAGACACCTCATCGCTCACT TTTTTTCATCCTATACCACTTTATCTCTGTGGCTAATAGATCCTATACCCTCATAGTATTGGATGTAGTAAACATTCGAC TCCAACATTCTATTCTGTTGAATAATCTGCTTGGTGTCCCTAGACTTTCCAATAATTTTATGTCAATTCACAAACTCACC CAAGATTTAATTTAACTGTGGTGACATTTTTTCATTCCATGTTTGATTGTCTGAATCTTGACACGGGGAAAAACAAATGG AGTTGCCAAGGAATATGGCTAATGAGGATAGTACCATCAGAAAGCGTTAACTTCACGAAAATGAGAGTAACAAGCGGGTC ATTGATTATGCAGAATCTGCAATCTCTTAAATATTGCTTCAGCACAGGCATTCTGGGCATCCTCCCTTTAGTGTGCTCAG AAGGTCTTTGTTTCGTTGCCCACTTCCAAAAGTGTCTATTGAGACCTTTCATGGTTAAGTTTGTCAGTTCGCCGAACACT ATCGTGCAACTTTTCTTTCTAGTAATAATAATAGTACTGAACCTTTAGATCTTGCAAAGTAGTTTGTTCCTGTATTGATG ATTGTAATTGGGTTCCATGGATATTTACTTGCCTGCCAATTTGTACTGTGTGATTAAAAACACAGTTTGGGAGACCAACT AAGATATTTCGTTCTGATAATGGGGAAGAGTATGTGAATCAAAACCTTTATTTCAAAGTGAACCATACAACAAAAACAAC TTGCATAACTGGAAATGTATTACTGCTTTGATTAGCTTTTGCAATCCAAATTTCAGAGTTTCTCTCTTTTTTTCTTTTAG GTCTGATTCAAACTTCATTTTGATCTTTATGCTATGCAGGCGCAATTGGGGATTGTTTTGTTGAGATAAAAGAAATTGCT CAATATTTTCTAGCTATTCACAACTCAAGTGAGCAGCAGTACAAGAAATGGGCAAAGTTATCTGCCAAGGATAATGATGG ATTATTCCTCAACAGCACAACAAAACGTTCGACTAGCTCAGGGTTGCACATGAAGCAGAAAAAGCAAATCCCTACAGATC ACACACAGGTATCTATCTATAATTATTTTCTATATTCTGCAAGCTGATGTAATTTTTCAAGTATGATAAAAAAAACTACT GTATGAGATGGGTGACTAAGTCCCATATCATATGAGCATTTTTTCTTGATTTCACATGGTTGATATGTTTGGTAAAGAAT AGTTGTAAGGAGTTGTGTGTATGTTGCAGGATTGCATAGTGCAGGATGTTCGACAAACACTTTATGAAACAATTTCATCT TTTGATGGCAATATAAGATGTGAAGATGAAATGGCAGCACTTATAGCTAGGCAATTTAGTGCCTTGCAGGAAGCATTCCA CATTCCAACTGAGTGTGTAGAAGATGCTCATGTCAAAGTTGCTGGGAAGTTGCTTAATCTTTTCCGTACGGGTCGCCTTG GACATTATGTTTTTGATAATCTTCCCAGAAATAGTCACCGATAAGGTTTTTCTTTTTATGATTTTTAAATTCTTATGCCA ACGTACGAACAAAGTGCACTTTTGTTATAGTGACAGCCTTTGTCTTCCATCTGCATCAACACTCGTTACAAAGAACGGGT CATGAGACCCAAGGGCTTCTACAATTATGAGGAGCACACACTTTCACATTTGAAATCTTCATCGGAATAATTCTTCCGTC GAAGTACAAGAACAATCTTAAGAGACATGATCCTCAAAGCTAAT
CDS sequence (LotjaGi3g1v0127200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGCGGCATCGCATTTGGGAAGACGAATAGGAACAGCTCTGAAGGAAATGATAGGATCCAAGAAGCGAGCACCATG GCACGATTCTCTCATGGCTGCAGCTTCGACCGCCATTGTAGAAAGGATCCCTTTAGTCGATATCATCGTCCATGTTAGAG ACGCTAGGATTCCATCGTCCTCTGAGTGCCACTTGCTCAAAAACTGCCCTTCTTCCTCTAAGCAAATTATAGCGCTCAAC AAATCGGATCTCGCTTGTTCTTCAGGTTTGCAGGCATGGACAGAATATTTTGCGGAAAACAACTGCATATCTTGTGGAGT CAATGCTCATAATAAGGAGAGCATCAGAAAGTTTCTAACCCTTATACAAGGCCAGGTGAGAAAGTTAGGGAGAACTGATC ATGCTAATTATACTGCAACAGTAATGTTAATTGGGATTCCAAATGTTGGTAAATCTGCACTTGTCAATGCCTTGCATCAA GTGGGGAGAATTAGTGCAGCAGAAAAAGGAAAGTTGAAACATGCAACTGTGAGTCCAGAGCCAGGGGAGACTAAAGATAT ACGAAGTTTTAAGATTGGTAGCCATCCCAATATTTATGTGTTAGACACTCCGGCCGTCTTGTCTCCTGAGGTTCCTGATG TTGATGTCATATCTAAATTAATTTTAACAGGCGCAATTGGGGATTGTTTTGTTGAGATAAAAGAAATTGCTCAATATTTT CTAGCTATTCACAACTCAAGTGAGCAGCAGTACAAGAAATGGGCAAAGTTATCTGCCAAGGATAATGATGGATTATTCCT CAACAGCACAACAAAACGTTCGACTAGCTCAGGGTTGCACATGAAGCAGAAAAAGCAAATCCCTACAGATCACACACAGG ATTGCATAGTGCAGGATGTTCGACAAACACTTTATGAAACAATTTCATCTTTTGATGGCAATATAAGATGTGAAGATGAA ATGGCAGCACTTATAGCTAGGCAATTTAGTGCCTTGCAGGAAGCATTCCACATTCCAACTGAGTGTGTAGAAGATGCTCA TGTCAAAGTTGCTGGGAAGTTGCTTAATCTTTTCCGTACGGGTCGCCTTGGACATTATGTTTTTGATAATCTTCCCAGAA ATAGTCACCGATAA
Protein sequence (LotjaGi3g1v0127200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAAASHLGRRIGTALKEMIGSKKRAPWHDSLMAAASTAIVERIPLVDIIVHVRDARIPSSSECHLLKNCPSSSKQIIALN KSDLACSSGLQAWTEYFAENNCISCGVNAHNKESIRKFLTLIQGQVRKLGRTDHANYTATVMLIGIPNVGKSALVNALHQ VGRISAAEKGKLKHATVSPEPGETKDIRSFKIGSHPNIYVLDTPAVLSPEVPDVDVISKLILTGAIGDCFVEIKEIAQYF LAIHNSSEQQYKKWAKLSAKDNDGLFLNSTTKRSTSSGLHMKQKKQIPTDHTQDCIVQDVRQTLYETISSFDGNIRCEDE MAALIARQFSALQEAFHIPTECVEDAHVKVAGKLLNLFRTGRLGHYVFDNLPRNSHR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 375 | 375 | 2.4E-167 | – | |
| PANTHER | 1 | 375 | 375 | 2.4E-167 | – | |
| Gene3D | 36 | 210 | 175 | 4.0E-32 | – | |
| SUPERFAMILY | 40 | 223 | 184 | 5.39E-23 | ||
| Pfam | 141 | 252 | 112 | 4.7E-12 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi3g1v0127200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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