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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0128600 |
| Transcript ID | LotjaGi3g1v0128600.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Major facilitator superfamily protein; TAIR: AT3G60070.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q6NUT3|MFS12_HUMAN Major facilitator superfamily domain-containing protein 12; TrEMBL-Plants: tr|A2Q3C2|A2Q3C2_MEDTR C19orf28 protein, related; Found in the gene: LotjaGi3g1v0128600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:15826743..15831205) extracted from Lotus japonicus Gifu genome v1.2.
TTGATGGGTAGTCTCGTTGAAGATGATGACTCATTTACCAAGCCCCTAGGAAGATGGCCTGTATTTTATTATGGCATGGG ACACATGCTCAATGACATAACTTCTGCTTGTTGGTTCACCTATCTATTACTGTTCCTGACAGATATTGGACTTTCACCAA GGTGCATTTTATGATCAAGTTGTTTTTCTTCATATTTTTGTATTCGTCAGAGAGTGTAGCTAACTTTTGTTTAAATGCTT GTTGTTTGATTTAACTGAAAGTTCAAATGGCAGAATTGAAAAAGCTGGCTGCCATTATAGTTTGATAGAAATCCAATTGA TAGGTTGAGGGAGGCAGCCCGGTATGTCTTGGGCTTGCATAAGGAAGACCTGACATTGATTTAGACTCATTCTCAAATAT GTAAATGGCTTAATGAGAAAAGCACACAGTTTTTACGAATTTCAATGAATATTACATAAAAAGGAGATAATTGATAATAA CAAGGCCGCAGTTAGCTGACTTCAGTATGCATGACCCCGACTGGTGAATTTGAAATATTTGAACATTCTTTTAGACTGTT ACTTAACAATGTAATAAATGATCTCCAAGATGTGAAAATTCATTTTTGTACATGTTAGAAAGCTTTTATCCTTAGATGTT ACACAAAAATCTATGTGATTCTTCAACATTATGTGTTTTCCTTTTTCATATTTTATAGGAATGCGGCTATTGTGATGCTT TCAGGTCAAGTGGCTGATGGATTTGCTACCATATTTGTTGGTGAACTGGTATTGAATCATTATTTTATCCTCTAATTCTA GGGTGAACTGGTAAAAGTACTTATTTCTGTCATCTTGGGTGATAGATAGACCGGTTTGGACATTTCAAGATATGGCATGG TGCTGGATCTTTATTGGTGGCTATTTCATTTTCTTCTGTTTTCGGTGGTTGCCTACCGTGTAAAGTTTTCGCTTCCAATT CATCTACTTTCGAAATTGTGAGTTACAGCGTGTTTGCAGCAATCTTCAATGTGGGCTGGGCTGCTACTCAGGTTTCTCAC ATGTAATAATTTCCTTCAATTTATCTGTTCTATTTGAAGTTGAAAATTGAAACTCAGTTTGAAATTTCAAACTAAGAGTG GTTAGCTGGTGCAGTCACATGTGAAATGTTAATTAGCCTGGTGCTCTTGGTTGCTTAAACTTAGAATTTTAAGTGTTGTT AGTGGTAATTATTACTACTAGAGTAACCTAAAGAGTCTCAGGATGATAAATTGTAGTGTCATCTTCAAACCAAGCAACAC TAGTGAATTCTATAGTTTATAATTTCTGTGGTTAAGAGAAAACATTAAATGAAAAATATAGCTTCGTATCTCTTCAATTT AAAACTATGATAATGACTATCGCCTTTGATTGCTTTCTTGAAGGTCAATGGTGAGTTGCATCACGCTGAACTCTTCAAGC AGAGTGGCGCTGGCTAGCTGTCGCAATGCTTTTACCATGGTAAGATTCTAGTAAAACTTCTCAGATATGAAACTCCGTAT CCTCTTGGGAGTGGAGTGGGGTGGGGGGGGAATCAACATCATGTTGATATGAATTACTAATCTATATGATTATATCTTCA AAGGTTGCAAACCTGAGCCTGTATGCTGTTGCATTGATTGTATTCAGTGTCATCAATGGTACAACATATGCTGATGTTGA GAATCAGGTATGTATGGTTATAATTGTTTGGATTCATCTGAGATAAGCTGTTGTCAAGCATAATCACTTTGTTATTCTTC CAAATGAGCAGTACCGCTGGATTGCATATGTCTCAATTTTTATTGGATGCTGTTTTGTGGCCATATTTCTTTTTGTAACA AAAGAACCCAGGTACGCTTGTAGGCTTATAGCTAATCTTATCCAATAAATTAAACTTTTGTTGTTCATAGACCGTAGTAG ACATATTGTATTACTTAAAACTTGAAAGCTTAAGCTGTTGGGTAGGGGCCATATGAATGATTATATATTATTATTTCTAA TCGTGATCTTGTACGTGCTCTTTAAAATGTCAAGATGCTCTTTGTCTAACTGGTAAATATGAGGTAGAGCAACACTTGAA TAACCCCTCTGCTGCCAGATATTGGGAAAATTCAAAACTCATGATGCCTACCTTGTACAGAAATTTTAGAAGCGAATATA ATATTGGTTTAAATGAGAGCTTATAATTGTAGAGCTTTAACCAAATGAAGCCTTAGTAATATTTTGTTCATGCAAGTCCG TTTTCCCTCTGAATTCTGCATGAAGAAGGTTGCTTGAGCAGTTTCAGCTTTGTTTTGGAAACATATAAACTTTGTCATGT ATTTTTTGTAGATTGGTGGTAAGCGTTCATGGAAAACCTCATGCTAGGATTTCATGGGTTTACTGGTTCAAGAGAGTTTT ATATTACCAGGTTGCTCTTGTTTATGTTCTCACAAGATTAATTCTCAACATTTCACAGGTTAGAACACTTATCCTTTCTT GCTCGTACGTTTCATTATGCTTTCTTGCTTGTGTGTGTTCATTATATTGCAAGACAAGAGGCTTAATAAGTTCAGATTAT ATTGCACGTTGGGGCTTGATATGTTGGATATAGTGTATTAGAATTCGGGTTAAGCCAAGCTCTACCCCAACAGCTAGCCC AAGGGTGAGGATTGCTCTACCCTTTAGTAGGACTTTTTAAGCCATATCTCTAGGCAAGTGTGGGACCTCAACACTCAACT CTCGTGGTCTGGACCTCTTGAGCGTGAAGGTTGCATGACTGGATATCTGCAGGTGACCCCATATGGGTGCCTAATAAATG GATATAGGAGAGGCTCTGATACCATATTATAATTCGGGTTAGACCTGACTCTATCCCAAAGTTAGCCCAGAGGTGAAGAT TGATCTACTATTTAGCCATATTTCTAGTCAATGTGAGACCTTAGCATAGTGTATGAGAAAGATACATCTTCAGGAACATC ATTAGAAACTGAAACATCATGTCTGCATTGGATTTCCAATTAAACAGAACAATGGTATATTGTATTGTATATAAACGTTT TGATGCCAAAATGGCTTCTTTTTCAGGCATACCTGGCTTTCTTTGTCATCAATGACCTGCAAATGGCTCAATCAGCCAAA GCCTTGGTACTCAAGACAAATTTTATTCACCTTAAATTCATTTCAGTCTGTTGAGCTTTATTTCGTTTGAAGTTTTTGAA CAATCACAAGGCTGATTACACTACTTGATGATGATGGAGTAGGTTCCTGCTCTCATATACATCTTCAGCTTCATCGTATC TATTGGATTACAGGTTCCCTTATTAAACAAAAATTGTTGATGGATATTTTTCAATATTATATTTTCATTTTGGTCAATCT CTATATTTAAGTTGGTTCACATTTTGTAGGAGATTGCATGGACTGGCCGATTGCTCAAGGCCTACTTTTCTGCTGGATGC ATTCTTTGGATTTTTTGTGGTGTCGTGATCCTTCTTTTAACTAGACATCTGAGTTATGTCATGTACGTAGCTTCAGTATT TATAGGCGTAGCAAATGCTCTGATGATGGTAAGATGTGATCCTTATTTAAATTGCCGAAAGAGAAAAAATATGTTTTTTT TTTTCTGTTTAGAAGTTCTCTTCGTAGATTTTGAAAATATTTGTAGCATTGCACAAGTTGTGAAACTATTTTTCTTCTTG GTCAGACATTATAGCAGTCGTCAATAAGAGTACAATAGTTTATCGAGACCTCAAGTTTAGCCCTAATAATTAGACCATAT ATAAAAGAAAAAGAAAATTTTGAAATTAGGCTGCTGCCATAGTGCCAGTGTTTTCAATGCTACTGCTACACTTGAATAAG AAGCTTATATTTGTATTGATGACACCCAAAAGGACCATTTATAACAACCTATTTCAATGACGGCCTGGTTTATACGTTTT CCCATATTCCTATCTGATATACACTTAAGCTGATATTTTTTGGGCTGATGACAGATTTCAGTATATATCTAAATAGTTAA TTATGTTAGAGACATCTGAGATGGTTTATTGGGTTAAGACTTACAAGTTTAATTTTTTTAATTAGAACATAGTAGTATAA ATTTACTTTGTCATGAATTCCAGCTATCATAATTCAGACTACTAAGGATCAGTTTTTATTGTTTATAATATTTGTTATTT TTAATGATAGGTGACCGGAATAAGCATGCAAAATTTTCTCATTGGGGAAAATGTCAATGGCTGTGCATTTGTTATCGGAT CATTGAGCTTTTTGGACAAAATGTCATGCGGGCTTGCTTTATATGTTCTTCAGTCATATCAAAGTAAGTTTCTTAAATAT TTTTTATCTGATGCTAATTTTGTGTTCAAATGAACTTGCTTCTATCCACATGGGTGGAATAAATATATCTAGCTTAAGAA TTTTCTCCACTATTTCGCACATCATGTTCCGACCTATCTTTGCTTCTTTCTCCCCTTGTATGA
CDS sequence (LotjaGi3g1v0128600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTAGTCTCGTTGAAGATGATGACTCATTTACCAAGCCCCTAGGAAGATGGCCTGTATTTTATTATGGCATGGGACA CATGCTCAATGACATAACTTCTGCTTGTTGGTTCACCTATCTATTACTGTTCCTGACAGATATTGGACTTTCACCAAGGA ATGCGGCTATTGTGATGCTTTCAGGTCAAGTGGCTGATGGATTTGCTACCATATTTGTTGGTGAACTGATAGACCGGTTT GGACATTTCAAGATATGGCATGGTGCTGGATCTTTATTGGTGGCTATTTCATTTTCTTCTGTTTTCGGTGGTTGCCTACC GTGTAAAGTTTTCGCTTCCAATTCATCTACTTTCGAAATTGTGAGTTACAGCGTGTTTGCAGCAATCTTCAATGTGGGCT GGGCTGCTACTCAGGTTTCTCACATGTCAATGGTGAGTTGCATCACGCTGAACTCTTCAAGCAGAGTGGCGCTGGCTAGC TGTCGCAATGCTTTTACCATGGTTGCAAACCTGAGCCTGTATGCTGTTGCATTGATTGTATTCAGTGTCATCAATGGTAC AACATATGCTGATGTTGAGAATCAGTACCGCTGGATTGCATATGTCTCAATTTTTATTGGATGCTGTTTTGTGGCCATAT TTCTTTTTGTAACAAAAGAACCCAGATTGGTGGTAAGCGTTCATGGAAAACCTCATGCTAGGATTTCATGGGTTTACTGG TTCAAGAGAGTTTTATATTACCAGGTTGCTCTTGTTTATGTTCTCACAAGATTAATTCTCAACATTTCACAGGCATACCT GGCTTTCTTTGTCATCAATGACCTGCAAATGGCTCAATCAGCCAAAGCCTTGGTTCCTGCTCTCATATACATCTTCAGCT TCATCGTATCTATTGGATTACAGGAGATTGCATGGACTGGCCGATTGCTCAAGGCCTACTTTTCTGCTGGATGCATTCTT TGGATTTTTTGTGGTGTCGTGATCCTTCTTTTAACTAGACATCTGAGTTATGTCATGTACGTAGCTTCAGTATTTATAGG CGTAGCAAATGCTCTGATGATGGTGACCGGAATAAGCATGCAAAATTTTCTCATTGGGGAAAATGTCAATGGCTGTGCAT TTGTTATCGGATCATTGAGCTTTTTGGACAAAATGTCATGCGGGCTTGCTTTATATGTTCTTCAGTCATATCAAAGTAAG TTTCTTAAATATTTTTTATCTGATGCTAATTTTGTGTTCAAATGA
Protein sequence (LotjaGi3g1v0128600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGSLVEDDDSFTKPLGRWPVFYYGMGHMLNDITSACWFTYLLLFLTDIGLSPRNAAIVMLSGQVADGFATIFVGELIDRF GHFKIWHGAGSLLVAISFSSVFGGCLPCKVFASNSSTFEIVSYSVFAAIFNVGWAATQVSHMSMVSCITLNSSSRVALAS CRNAFTMVANLSLYAVALIVFSVINGTTYADVENQYRWIAYVSIFIGCCFVAIFLFVTKEPRLVVSVHGKPHARISWVYW FKRVLYYQVALVYVLTRLILNISQAYLAFFVINDLQMAQSAKALVPALIYIFSFIVSIGLQEIAWTGRLLKAYFSAGCIL WIFCGVVILLLTRHLSYVMYVASVFIGVANALMMVTGISMQNFLIGENVNGCAFVIGSLSFLDKMSCGLALYVLQSYQSK FLKYFLSDANFVFK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | - | – | |
| PANTHER | 7 | 400 | 394 | 2.9E-208 | ||
| PANTHER | 7 | 400 | 394 | 2.9E-208 | – | |
| SUPERFAMILY | 17 | 379 | 363 | 1.7E-21 | ||
| Gene3D | 17 | 403 | 387 | 2.2E-13 | – | |
| Phobius | 20 | 43 | 24 | - | – | |
| TMHMM | 20 | 42 | 23 | - | – | |
| Pfam | 23 | 391 | 369 | 1.8E-16 | – | |
| CDD | 23 | 396 | 374 | 1.00552E-89 | – | |
| Phobius | 44 | 54 | 11 | - | – | |
| Phobius | 55 | 73 | 19 | - | – | |
| TMHMM | 55 | 77 | 23 | - | – | |
| Phobius | 74 | 84 | 11 | - | – | |
| Phobius | 85 | 106 | 22 | - | – | |
| TMHMM | 92 | 113 | 22 | - | – | |
| Phobius | 107 | 117 | 11 | - | – | |
| Phobius | 118 | 136 | 19 | - | – | |
| TMHMM | 120 | 142 | 23 | - | – | |
| Phobius | 137 | 163 | 27 | - | – | |
| TMHMM | 164 | 186 | 23 | - | – | |
| Phobius | 164 | 186 | 23 | - | – | |
| Phobius | 187 | 197 | 11 | - | – | |
| Phobius | 198 | 217 | 20 | - | – | |
| TMHMM | 198 | 217 | 20 | - | – | |
| Phobius | 218 | 244 | 27 | - | – | |
| Phobius | 245 | 271 | 27 | - | – | |
| TMHMM | 249 | 271 | 23 | - | – | |
| Phobius | 272 | 282 | 11 | - | – | |
| Phobius | 283 | 300 | 18 | - | – | |
| TMHMM | 283 | 305 | 23 | - | – | |
| Phobius | 301 | 311 | 11 | - | – | |
| TMHMM | 309 | 331 | 23 | - | – | |
| Phobius | 312 | 331 | 20 | - | – | |
| Phobius | 332 | 337 | 6 | - | – | |
| TMHMM | 336 | 358 | 23 | - | – | |
| Phobius | 338 | 361 | 24 | - | – | |
| Phobius | 362 | 372 | 11 | - | – | |
| Phobius | 373 | 394 | 22 | - | – | |
| TMHMM | 373 | 395 | 23 | - | – | |
| Phobius | 395 | 414 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Carbohydrate transport | The directed movement of carbohydrate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y. | ||
| Molecular function | Symporter activity | Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi3g1v0128600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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