Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0128600 |
| Transcript ID | LotjaGi3g1v0128600.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Major facilitator superfamily protein; TAIR: AT3G60070.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q6NUT3|MFS12_HUMAN Major facilitator superfamily domain-containing protein 12; TrEMBL-Plants: tr|A2Q3C2|A2Q3C2_MEDTR C19orf28 protein, related; Found in the gene: LotjaGi3g1v0128600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:15826746..15832325) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGTAGTCTCGTTGAAGATGATGACTCATTTACCAAGCCCCTAGGAAGATGGCCTGTATTTTATTATGGCATGGGACA CATGCTCAATGACATAACTTCTGCTTGTTGGTTCACCTATCTATTACTGTTCCTGACAGATATTGGACTTTCACCAAGGT GCATTTTATGATCAAGTTGTTTTTCTTCATATTTTTGTATTCGTCAGAGAGTGTAGCTAACTTTTGTTTAAATGCTTGTT GTTTGATTTAACTGAAAGTTCAAATGGCAGAATTGAAAAAGCTGGCTGCCATTATAGTTTGATAGAAATCCAATTGATAG GTTGAGGGAGGCAGCCCGGTATGTCTTGGGCTTGCATAAGGAAGACCTGACATTGATTTAGACTCATTCTCAAATATGTA AATGGCTTAATGAGAAAAGCACACAGTTTTTACGAATTTCAATGAATATTACATAAAAAGGAGATAATTGATAATAACAA GGCCGCAGTTAGCTGACTTCAGTATGCATGACCCCGACTGGTGAATTTGAAATATTTGAACATTCTTTTAGACTGTTACT TAACAATGTAATAAATGATCTCCAAGATGTGAAAATTCATTTTTGTACATGTTAGAAAGCTTTTATCCTTAGATGTTACA CAAAAATCTATGTGATTCTTCAACATTATGTGTTTTCCTTTTTCATATTTTATAGGAATGCGGCTATTGTGATGCTTTCA GGTCAAGTGGCTGATGGATTTGCTACCATATTTGTTGGTGAACTGGTATTGAATCATTATTTTATCCTCTAATTCTAGGG TGAACTGGTAAAAGTACTTATTTCTGTCATCTTGGGTGATAGATAGACCGGTTTGGACATTTCAAGATATGGCATGGTGC TGGATCTTTATTGGTGGCTATTTCATTTTCTTCTGTTTTCGGTGGTTGCCTACCGTGTAAAGTTTTCGCTTCCAATTCAT CTACTTTCGAAATTGTGAGTTACAGCGTGTTTGCAGCAATCTTCAATGTGGGCTGGGCTGCTACTCAGGTTTCTCACATG TAATAATTTCCTTCAATTTATCTGTTCTATTTGAAGTTGAAAATTGAAACTCAGTTTGAAATTTCAAACTAAGAGTGGTT AGCTGGTGCAGTCACATGTGAAATGTTAATTAGCCTGGTGCTCTTGGTTGCTTAAACTTAGAATTTTAAGTGTTGTTAGT GGTAATTATTACTACTAGAGTAACCTAAAGAGTCTCAGGATGATAAATTGTAGTGTCATCTTCAAACCAAGCAACACTAG TGAATTCTATAGTTTATAATTTCTGTGGTTAAGAGAAAACATTAAATGAAAAATATAGCTTCGTATCTCTTCAATTTAAA ACTATGATAATGACTATCGCCTTTGATTGCTTTCTTGAAGGTCAATGGTGAGTTGCATCACGCTGAACTCTTCAAGCAGA GTGGCGCTGGCTAGCTGTCGCAATGCTTTTACCATGGTAAGATTCTAGTAAAACTTCTCAGATATGAAACTCCGTATCCT CTTGGGAGTGGAGTGGGGTGGGGGGGGAATCAACATCATGTTGATATGAATTACTAATCTATATGATTATATCTTCAAAG GTTGCAAACCTGAGCCTGTATGCTGTTGCATTGATTGTATTCAGTGTCATCAATGGTACAACATATGCTGATGTTGAGAA TCAGGTATGTATGGTTATAATTGTTTGGATTCATCTGAGATAAGCTGTTGTCAAGCATAATCACTTTGTTATTCTTCCAA ATGAGCAGTACCGCTGGATTGCATATGTCTCAATTTTTATTGGATGCTGTTTTGTGGCCATATTTCTTTTTGTAACAAAA GAACCCAGGTACGCTTGTAGGCTTATAGCTAATCTTATCCAATAAATTAAACTTTTGTTGTTCATAGACCGTAGTAGACA TATTGTATTACTTAAAACTTGAAAGCTTAAGCTGTTGGGTAGGGGCCATATGAATGATTATATATTATTATTTCTAATCG TGATCTTGTACGTGCTCTTTAAAATGTCAAGATGCTCTTTGTCTAACTGGTAAATATGAGGTAGAGCAACACTTGAATAA CCCCTCTGCTGCCAGATATTGGGAAAATTCAAAACTCATGATGCCTACCTTGTACAGAAATTTTAGAAGCGAATATAATA TTGGTTTAAATGAGAGCTTATAATTGTAGAGCTTTAACCAAATGAAGCCTTAGTAATATTTTGTTCATGCAAGTCCGTTT TCCCTCTGAATTCTGCATGAAGAAGGTTGCTTGAGCAGTTTCAGCTTTGTTTTGGAAACATATAAACTTTGTCATGTATT TTTTGTAGATTGGTGGTAAGCGTTCATGGAAAACCTCATGCTAGGATTTCATGGGTTTACTGGTTCAAGAGAGTTTTATA TTACCAGGTTGCTCTTGTTTATGTTCTCACAAGATTAATTCTCAACATTTCACAGGTTAGAACACTTATCCTTTCTTGCT CGTACGTTTCATTATGCTTTCTTGCTTGTGTGTGTTCATTATATTGCAAGACAAGAGGCTTAATAAGTTCAGATTATATT GCACGTTGGGGCTTGATATGTTGGATATAGTGTATTAGAATTCGGGTTAAGCCAAGCTCTACCCCAACAGCTAGCCCAAG GGTGAGGATTGCTCTACCCTTTAGTAGGACTTTTTAAGCCATATCTCTAGGCAAGTGTGGGACCTCAACACTCAACTCTC GTGGTCTGGACCTCTTGAGCGTGAAGGTTGCATGACTGGATATCTGCAGGTGACCCCATATGGGTGCCTAATAAATGGAT ATAGGAGAGGCTCTGATACCATATTATAATTCGGGTTAGACCTGACTCTATCCCAAAGTTAGCCCAGAGGTGAAGATTGA TCTACTATTTAGCCATATTTCTAGTCAATGTGAGACCTTAGCATAGTGTATGAGAAAGATACATCTTCAGGAACATCATT AGAAACTGAAACATCATGTCTGCATTGGATTTCCAATTAAACAGAACAATGGTATATTGTATTGTATATAAACGTTTTGA TGCCAAAATGGCTTCTTTTTCAGGCATACCTGGCTTTCTTTGTCATCAATGACCTGCAAATGGCTCAATCAGCCAAAGCC TTGGTACTCAAGACAAATTTTATTCACCTTAAATTCATTTCAGTCTGTTGAGCTTTATTTCGTTTGAAGTTTTTGAACAA TCACAAGGCTGATTACACTACTTGATGATGATGGAGTAGGTTCCTGCTCTCATATACATCTTCAGCTTCATCGTATCTAT TGGATTACAGGTTCCCTTATTAAACAAAAATTGTTGATGGATATTTTTCAATATTATATTTTCATTTTGGTCAATCTCTA TATTTAAGTTGGTTCACATTTTGTAGGAGATTGCATGGACTGGCCGATTGCTCAAGGCCTACTTTTCTGCTGGATGCATT CTTTGGATTTTTTGTGGTGTCGTGATCCTTCTTTTAACTAGACATCTGAGTTATGTCATGTACGTAGCTTCAGTATTTAT AGGCGTAGCAAATGCTCTGATGATGGTAAGATGTGATCCTTATTTAAATTGCCGAAAGAGAAAAAATATGTTTTTTTTTT TCTGTTTAGAAGTTCTCTTCGTAGATTTTGAAAATATTTGTAGCATTGCACAAGTTGTGAAACTATTTTTCTTCTTGGTC AGACATTATAGCAGTCGTCAATAAGAGTACAATAGTTTATCGAGACCTCAAGTTTAGCCCTAATAATTAGACCATATATA AAAGAAAAAGAAAATTTTGAAATTAGGCTGCTGCCATAGTGCCAGTGTTTTCAATGCTACTGCTACACTTGAATAAGAAG CTTATATTTGTATTGATGACACCCAAAAGGACCATTTATAACAACCTATTTCAATGACGGCCTGGTTTATACGTTTTCCC ATATTCCTATCTGATATACACTTAAGCTGATATTTTTTGGGCTGATGACAGATTTCAGTATATATCTAAATAGTTAATTA TGTTAGAGACATCTGAGATGGTTTATTGGGTTAAGACTTACAAGTTTAATTTTTTTAATTAGAACATAGTAGTATAAATT TACTTTGTCATGAATTCCAGCTATCATAATTCAGACTACTAAGGATCAGTTTTTATTGTTTATAATATTTGTTATTTTTA ATGATAGGTGACCGGAATAAGCATGCAAAATTTTCTCATTGGGGAAAATGTCAATGGCTGTGCATTTGTTATCGGATCAT TGAGCTTTTTGGACAAAATGTCATGCGGGCTTGCTTTATATGTTCTTCAGTCATATCAAAGTAAGTTTCTTAAATATTTT TTATCTGATGCTAATTTTGTGTTCAAATGAACTTGCTTCTATCCACATGGGTGGAATAAATATATCTAGCTTAAGAATTT TCTCCACTATTTCGCACATCATGTTCCGACCTATCTTTGCTTCTTTCTCCCCTTGTATGAACCTTCATTAAGGACCCATG ATGAGGCCCATCAAAGTTCCGTCTTAGTTTTGGCTTTGTCCAGAAATGCTTTCACAGATTATTTGTTCAGAAATGTCTTC TGGTGGAGTGAATTATAAATTATAATTCTTTGTCCAGAAAAAAATGATCAGCCCGTGACTACTATAAAAAATATGGAATA ACTTCATACTTTATGGTCTAGATTCATGTCATAACATGGACAAAAAGGAAGAGCACAAGAAAATAAAAAGAACACTTGTT CCAGTATGGAGCATTGTGTGGTAGGGTAGTACCTAGAGTGTAGAGAGATTGCACTAGAGAGAGAGGTTAGAGAGAGAGAG AATAACTGAATTCCACTTGTATTACCAAGAAATGAGCCAAAGTCCTTTACAATTGATAACTGTTGCCTATTTATAGGTGT GGGGCGTGGGCCCCGTGTGTGCTAGCCTATTCCTAATGGGCCACTTGGGCCATGCAATTAGGCCCAACTTGGAGGCCAAC TGTCCTGCCAAGGGCGGGTCACCTTAGGGCGTTGCCCCTATAGGGGCTCGCCCGGTCCAACACCTCATATCATAACAGAA GTGAACCAAAATGTAAGAAACCCTTTTGTTGCTTAACCAATTTAAGGACTGTTCTAAATACTGTTAACTTGCAACATCCA TGTTTGGTGGTGTAATATGCATTTTTGTCATCATGGCATGACAAATTATGCTTTTTGACATGGAGAAAATACCTGATGAG AATCAAATGTGCTTTAGACACTGAATTTATTCAAAACTAGGTTAGTTTTAATCAGAATTAAAATCCAATACAAAGTTTAT AGATCCTATAAGGACTTCAAAATCCGTAAGTAAATCCAGACCTTGCCTAACGTAAACTCGTAAGAGCTTTGTTAATACTT GGTAATAATAATTGTATCTTTATTTAATGATCTCATAATTGTTCAAATCATCTATGTAGATATCTCTCCAGATCTGCAAG GCAATCAGTTCTCCTTTTCAATTACAAGGATTGGTTTGGGTCTCGTTCCTGCATTGTGTGCACTAGTTGGGGTGGGTGTA ACTTGCACCATGGATCTCCATAGTCCTTCCACGTCTTTGACTGCACCACTACTAGTCTAG
CDS sequence (LotjaGi3g1v0128600.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTAGTCTCGTTGAAGATGATGACTCATTTACCAAGCCCCTAGGAAGATGGCCTGTATTTTATTATGGCATGGGACA CATGCTCAATGACATAACTTCTGCTTGTTGGTTCACCTATCTATTACTGTTCCTGACAGATATTGGACTTTCACCAAGGA ATGCGGCTATTGTGATGCTTTCAGGTCAAGTGGCTGATGGATTTGCTACCATATTTGTTGGTGAACTGATAGACCGGTTT GGACATTTCAAGATATGGCATGGTGCTGGATCTTTATTGGTGGCTATTTCATTTTCTTCTGTTTTCGGTGGTTGCCTACC GTGTAAAGTTTTCGCTTCCAATTCATCTACTTTCGAAATTGTGAGTTACAGCGTGTTTGCAGCAATCTTCAATGTGGGCT GGGCTGCTACTCAGGTTTCTCACATGTCAATGGTGAGTTGCATCACGCTGAACTCTTCAAGCAGAGTGGCGCTGGCTAGC TGTCGCAATGCTTTTACCATGGTTGCAAACCTGAGCCTGTATGCTGTTGCATTGATTGTATTCAGTGTCATCAATGGTAC AACATATGCTGATGTTGAGAATCAGTACCGCTGGATTGCATATGTCTCAATTTTTATTGGATGCTGTTTTGTGGCCATAT TTCTTTTTGTAACAAAAGAACCCAGATTGGTGGTAAGCGTTCATGGAAAACCTCATGCTAGGATTTCATGGGTTTACTGG TTCAAGAGAGTTTTATATTACCAGGTTGCTCTTGTTTATGTTCTCACAAGATTAATTCTCAACATTTCACAGGCATACCT GGCTTTCTTTGTCATCAATGACCTGCAAATGGCTCAATCAGCCAAAGCCTTGGTTCCTGCTCTCATATACATCTTCAGCT TCATCGTATCTATTGGATTACAGGAGATTGCATGGACTGGCCGATTGCTCAAGGCCTACTTTTCTGCTGGATGCATTCTT TGGATTTTTTGTGGTGTCGTGATCCTTCTTTTAACTAGACATCTGAGTTATGTCATGTACGTAGCTTCAGTATTTATAGG CGTAGCAAATGCTCTGATGATGGTGACCGGAATAAGCATGCAAAATTTTCTCATTGGGGAAAATGTCAATGGCTGTGCAT TTGTTATCGGATCATTGAGCTTTTTGGACAAAATGTCATGCGGGCTTGCTTTATATGTTCTTCAGTCATATCAAAATATC TCTCCAGATCTGCAAGGCAATCAGTTCTCCTTTTCAATTACAAGGATTGGTTTGGGTCTCGTTCCTGCATTGTGTGCACT AGTTGGGGTGGGTGTAACTTGCACCATGGATCTCCATAGTCCTTCCACGTCTTTGACTGCACCACTACTAGTCTAG
Protein sequence (LotjaGi3g1v0128600.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGSLVEDDDSFTKPLGRWPVFYYGMGHMLNDITSACWFTYLLLFLTDIGLSPRNAAIVMLSGQVADGFATIFVGELIDRF GHFKIWHGAGSLLVAISFSSVFGGCLPCKVFASNSSTFEIVSYSVFAAIFNVGWAATQVSHMSMVSCITLNSSSRVALAS CRNAFTMVANLSLYAVALIVFSVINGTTYADVENQYRWIAYVSIFIGCCFVAIFLFVTKEPRLVVSVHGKPHARISWVYW FKRVLYYQVALVYVLTRLILNISQAYLAFFVINDLQMAQSAKALVPALIYIFSFIVSIGLQEIAWTGRLLKAYFSAGCIL WIFCGVVILLLTRHLSYVMYVASVFIGVANALMMVTGISMQNFLIGENVNGCAFVIGSLSFLDKMSCGLALYVLQSYQNI SPDLQGNQFSFSITRIGLGLVPALCALVGVGVTCTMDLHSPSTSLTAPLLV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | - | – | |
| PANTHER | 7 | 443 | 437 | 4.2E-221 | ||
| PANTHER | 7 | 443 | 437 | 4.2E-221 | – | |
| SUPERFAMILY | 17 | 380 | 364 | 1.83E-19 | ||
| Gene3D | 17 | 223 | 207 | 1.2E-12 | – | |
| Phobius | 20 | 43 | 24 | - | – | |
| TMHMM | 20 | 42 | 23 | - | – | |
| Pfam | 23 | 435 | 413 | 5.3E-17 | – | |
| CDD | 23 | 438 | 416 | 6.40383E-90 | – | |
| Phobius | 44 | 54 | 11 | - | – | |
| TMHMM | 55 | 77 | 23 | - | – | |
| Phobius | 55 | 73 | 19 | - | – | |
| Phobius | 74 | 84 | 11 | - | – | |
| Phobius | 85 | 106 | 22 | - | – | |
| TMHMM | 92 | 113 | 22 | - | – | |
| Phobius | 107 | 117 | 11 | - | – | |
| Phobius | 118 | 136 | 19 | - | – | |
| TMHMM | 120 | 142 | 23 | - | – | |
| Phobius | 137 | 141 | 5 | - | – | |
| Phobius | 142 | 159 | 18 | - | – | |
| Phobius | 160 | 170 | 11 | - | – | |
| TMHMM | 164 | 186 | 23 | - | – | |
| Phobius | 171 | 192 | 22 | - | – | |
| Phobius | 193 | 197 | 5 | - | – | |
| Phobius | 198 | 217 | 20 | - | – | |
| TMHMM | 198 | 217 | 20 | - | – | |
| Phobius | 218 | 243 | 26 | - | – | |
| Phobius | 244 | 271 | 28 | - | – | |
| TMHMM | 249 | 271 | 23 | - | – | |
| Phobius | 272 | 282 | 11 | - | – | |
| Phobius | 283 | 300 | 18 | - | – | |
| TMHMM | 283 | 305 | 23 | - | – | |
| Phobius | 301 | 311 | 11 | - | – | |
| TMHMM | 309 | 331 | 23 | - | – | |
| Phobius | 312 | 331 | 20 | - | – | |
| Phobius | 332 | 336 | 5 | - | – | |
| TMHMM | 336 | 358 | 23 | - | – | |
| Phobius | 337 | 360 | 24 | - | – | |
| Phobius | 361 | 371 | 11 | - | – | |
| Phobius | 372 | 393 | 22 | - | – | |
| TMHMM | 373 | 395 | 23 | - | – | |
| Phobius | 394 | 412 | 19 | - | – | |
| Phobius | 413 | 434 | 22 | - | – | |
| TMHMM | 416 | 438 | 23 | - | – | |
| Phobius | 435 | 451 | 17 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Carbohydrate transport | The directed movement of carbohydrate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y. | ||
| Molecular function | Symporter activity | Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi3g1v0128600.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…