Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0133600 |
| Transcript ID | LotjaGi3g1v0133600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Defective in cullin neddylation protein; TAIR: AT3G12760.1 defective in cullin neddylation protein; Swiss-Prot: sp|Q8BZJ7|DCNL2_MOUSE DCN1-like protein 2; TrEMBL-Plants: tr|I3SDD7|I3SDD7_LOTJA Defective in cullin neddylation protein; Found in the gene: LotjaGi3g1v0133600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:16930624..16939698) extracted from Lotus japonicus Gifu genome v1.2.
TGATGAGTTAGTTTTGCATGGATGAAATAGAAAATTTGCCAATTTGTTCTTCTTTTCCGATTTCTTCTCGAAAGTAAGTA GGGTCCACTTCACAGTGTGTACCAAAACCATAAGGCATCATTCTGCAGCTCACAATTCCATTCGGAAGCAAAATTCAATT CAATCAACCAAAAACCCTAATTTCCTTTCCCTTCCTCTCCTTCCAATCCTAGATCTTCAACTCCTCTAGGGTTTTCCCAT CCTCTAACCATGGTCAGTGCTAGATTTTCTTTTCGATTTCGTTCGTTTTTCCCTGTTTTTAGCTCAATTTTCACTACACA GTTTCACTCCCAAGTTTCGATTTTTCTTCTTTGTTCGTCACTTTGTTTCTTCAAATTCTCAATCTTACTTAATTGATTGC TTGCTATTATAATCATTGATCCTTGCTTTGAATTGGTACTCAAACTTGAGTGTGTTGAATTATGTTGATTTTTTGATGAA TTTATGTAGTGTGTTGTGTTAATAATTTTGTTCTGATTTGTACTGCAGCACAAATTGGGGAGAGGCCATCGCGATAAACT CCAGCAGTTCATAACAATAACTGGAGCTAGGTAATCTCATAGTTGGCAATGATTTTGTTTGATAGAAGGCCTTTTGAATA CATTTGTGTTTTCATTCTGTGAATTGTTCGCGTAATCGCGTTCCTTGAATTGATTACTTTGTCTAGTATTGACCGGGGAT CGTGTGATCATTGTGGGCATAGTTATATTTTCAATGTCAATTATGTTTTATCTTGATATTACATCTTAGTTTTGTTTCTG TTATTTGCTGCTTCAGCTGAATTATTCAAATTTATTTTGTGGGGGGTTAGTGTTTGGTATTTATATGAATGCACATCAAC TTCATATTTCAGCTTCTGTTATTGATTTGGGTATATAATTTGTATTTTCAGTGAGAAAGTAGCACTGCAGTCTCTGAAGG CTAGTGATTGGCATCTTGAAGGAGCATTTGATTTTTTTTATAGCCAGCCCCAGCTTAAAGCATCTACAGATTCTAGACAC TTGGAGGAGCTATACAATAGATATAAAGGTTAGCGATGAAGGTGAAAAAAAAATCAGACACGGATAGGATAGCTTTTGAA ATAGTTATAAGCAGTAAATTTTAAACTCTGATAAGCATAACAGTCAAGTAGTAATAGCGCTATAGCGCTGCTATATCCGC TATTCGACAACACTGATTCTGAATCATTAGGATACTAGTGTATCTCCCTCTAATTTTACTTGTAGGAAAAAGTCACTGAA TAGAAGTTTCTTTTATTTGAGTCTAAGAAATGGGGAAAATATGGTGGTGGATTCAAGATCGTAAACTTTTGTATGTGAAC ATACATTAAAGATGTTAATCAAGGCTACCTTTTGTTTGGGCTCAGATGCTTACATGAACTTTAAAACTGAGCTGTTTCTA ATTGTTTATCTTTAAGTTACTTGTTTCCAGTTGGTAAGTGGCTATCATTTATTGATAAGAACCTTGGGAGAACCACACCA CAAAAGCTAGCTGTTGTAGTTGGAGAGCCCAAGGCCTTATAAACCCCACATTAGAATCCCATACTTCCAATGTGGGACTC AAGTCCCATACCTTGCAATGGGGTCCTAACAATTATAAATTGGTACATAATTTCTATTTGCTAAAAAATTCTTTATTGCC CCAAATTTCCTTGCAGATCAGTATGTTGATATGATTTTGGCAGATGGTATCACTCTCCTTTGCAATGATATTCAGGTTGG TATTCCTGAATGTAAATCAATTGTATTCTTGATGTTTTGATTCAGCATATTTATAATTGTGCACTTATAATTATCACAGA AGCTTTCACATAAGGATGAACAGTACTTGTAACCAGTAATTGTGCAGTTTTTTATTATTATTGGCACTGGAACAGAATTG CAGTCAAATGCTTTAGTGATTTGGAATTGGGTTAGTTTAAGGCGTCTGGTTTTAGGACAGATCTGATAGGGAGTTCTTCA AGATAAATCAGAGTAGTGGAGATAAAGAAAAAGAAGAAGAAAACCAAGGCTTTACGCCTTGGGATAATTGCTTAATCTTG GATTAGTTGAAACTTAGGGATTAAGTAGTCCAAAACTTGAGAACCAAGTTTAACATTAACATAATGGAAGGAATATTGTA TGAGTAGATTGAAATGGAATAACTGGAGAGTGAGAATGTAAAAGGGATCTGCAAATGCCAAGTGGAACATTGTGTCTATC TCTCTCTTCATAAATATTTAAAGGGCCGTCCAACATATTTAATACATATGAAGAGAGAGATAGATACAAAACTCCATGTG ATGGCACATGAGAGTTTTCACATGAGAGGATCCTGACCCATCTAATATACCCCTATTGTAACCTAGTTTTTTCTTAAAAT TTATTTATTTATGAATTGTGTCATATTCATATCAGAGATAAGACTTGTTTGTTACGACCATCATCTTGAAGTCAGGCTGA TCATCCCAATTTCATTGGTCTTGTTAAATATCACCACATGAGAGGATCCTGATCCATCTAATATACCCCCTATTGTAATC TATTTTTTTCTTAAATTTATATGAATGGTCTCATATTCATATCAGAGATGAGACTTGTTATGACCATCATTTTGAAGTCA AGTTGATTATCCCAATTTCATTGCTCTTGTTAAATATCACCATATCTCATACATTTGCTTAAATTATATTGATTTCAGAT GTTTTATTATCTTATTTATATTTGTGATGTTTTTGAGTTTTGATTCATTTAGATGGTTAAGATCATTTTTGCTAGTGTAA CTGATGCCTTTCTTTTCATGTGCAGGTGGATCCTCAAGATATAGTAATGGTACGATTATGTATTTCATATTGTTTTTTAT TTCTAGATCAAGGATAATTGCTTTTTTCTTTATTGTTTCCTCTTTTTGTATAATCCTCCTTTTTGCTTAGAAAGCTCTGT TTAAACTGTGATCATTGGAATCTGACATACCCAATAGCTGAAATTCAGTTGGTATTTTATTACCTATAAAAGAGATACAG GGTGTGGGAACTTTAGTTGGAAGTAACGATGGTTTTTCAAGAGTGGCATTATTTAATTTTATTTTTTGAGATTTACATAT ATGCTGGCCAAGAAGTTACCAATGGCATAACAAAATGTTCACTTAGGTTTTAAAATCAGTTTTTTTTTTTTCTTTTTCTG AGTGTAGAAGCTCTTAACTTATATAAGCTCCAACAAGTATTAAATAATAAATATAGCAAAATAAGTTCCTTCTTTTTGAA GGATGGAAAAAAATGACTGCTAATAGTGCCTCTCATTTAACGGTGCAAGTGAATGATGATTATCGGTACTTACATGGTGA AATATGCTATAGGGTTAAATATGTTTTTTCGTCCTTGTAAAATACACTAATACAGAACTCATGGTCCTTACAAAATGCAG AACTCATGTGAGGGACTAAAACCACATAACTTTTATTTTCTCAGGACTAAAACGAATCAAATTTTAATAGGGATTAAAAC TAAAATGTGTTAATTTTACATGGATAAAAAAATAGTTAAATAATATTTGTAAATGAAGAGTTTGTAATTTATAATGAATT CTTGTCAAACATCTGTTTACACTTCCTATGTTAGTGTTAACTTGCTTGCATCATGGGAATATATGCGGATGACTTGGGAA CACTAGGTAACTGAGATGATGACATTTTTGCAGTTAGTTCTTTCGTGGCACATGAAGGCTGGCACCATGTGTGAATTTTC CAAGAAGGAGTTCATTGAAGGCTTACAGTCTCTGGGGTATGAATTATATAATGACTTTCGAAAGTAAATTTGTTTCTTCA ATGACGAAATCCCAGTTGAAGATCATATAATTTTTTTTCAGGATTGATTCATTGGAGAAGTTCCGTGAAAAGATACCATA CATGCGCTCTGAGCTGAAAGATGAATGTATGGACAATAGCACTCAAATCATTGCTTGGATATATAGTCTTATTCATACAA TTTATATCTCATTTGTTGTTAGAAATGATCTCCAGCAATTATTGAAGATGCTTCCTGAAATTATATTTCTATTCTTTAAT TGTCCAGATAAGTTCCGTGACATATACAACTTTGCTTTCAGCTGGGCGAAAGAGAAGGTATGCATTGATGTCTGCTTGTT TACCCTCACCTCTCCTTTATGCAGTTTAAGTAATTTGCATGGCAACTTATTCCCTGACCTAATTTAAACAATGCATTTGG ATTAATGAAATCTATTGGTACCCGAAAGTTCTTAGTTCTTACCACACTAATAGTGAAGTCATAACTAATTTGGTTCACTC ATCACTAATTTTGAGTCATTTTTAGATATTGATTGGAGATACTTCTTTAGTTTGAATCTTAGACTAGATTTTCAACTATA CAGTTATAGTGTGTTGAGTTGTATTGAAAGTTTGAAACAGCAAAACTTCTTTTTCCTGTAGTCAACCTCATTCATAAAGT GTTCCCAGTTCCTGTTTCTTGCTTTTGAGGTTCAATATATTGTAATCTATCTGATTGTTAGGCAACCTCACTTTTTCGGA GCAGGTTTTCTGCTTCTGGTCATTAATTCTTTAGGATGACCTAAAATTCTTCTCGTGGATGTCATACGCTAGAGATGCTT CGTGTCCTTCCCTAGTGTTCAAAATTCAAATAAAAAATTGAATTGTATGTTAATTTATGATTGATGGCTTTCTGTTTCAT TCTTTTGGTGAACTTGTTCAAATTGGTTCTTAAAAATATAATTTATGATTTAATGCACCCTAAACTTCAAGTTGGTTCTT ATAAGGACCAAATTTTACCTCCAATTTGGTTCTTATAATAAGGACTGGAGGGAGTATTATGTATGAGGTTTGCATTCTAA ACACACAAAGTTGGTTTTTAATGAAATTGTAGGAGTAGAGAGAGTTAGGACAATGAAAACGAGTTCATTGATTGAATGAG CTATCACAGATACAAGTGCATGAAGAGTCTCAGCATTATGTTGAGCTTCTAATAGCTAAGCCTAATTAGTAACTAACTTT ACAAATGGCACTAACTTATTGCAACAACGTTATAGGTATTTCCTATACATTGACTGTAGCTTATCTATCATACTCAAATA CCCCCCCCCCCTCTTTAATCTCAGCTAGTGTGCGAGGCAAATTGAGACTGCACACAGTTAGTTTGGAGCACATGTCAAAA GGTCTAGTAGAGGGCAATAGCTTGATAAGGGCACAAGCCCTGAAATTCTTCTCGCAGATTTTGGACAACAGCTGTTTGTT AGTGACCTTCTTTCTAACAATGAGGTATAATTCCATACATATGGACCTCGCATGCAGGACGAGTTGTGTGCCAACGACAC TACTGAGATTGTCACAGTAGAGAGAGAGAGAGAGAGAATGGTTGTGACAACCTAAAGTTCCTGATGTAAGGACAGGACTA GATCTATAGGACATCACCTGAGGACAGCTGAGGTGAGCCAAGCCCCTATATTCAGCCTACATACTACTTTGAGCAACATC GGGCTGCTTCCAAGACCACTATGATATGAGGTATCTGCCCAAAAATATGCAAACACCAGAAGTTGACTTGATCATCAGGT TAGTGACCCAATGCGCATCACAATCCACAAATGTGCATTGTGCAAAGGGGATGAGGCTGCAGACCGTAGATTAAAACCAT ATATGATAGTGCCTTTTTGAGTGTCCTAGAATACACATAACTGCAGTCCAATAAGTATCCAAGGGGTTATTTGTAAATTG ACAGCACCTGTTGACTGAATAGCTCAGGTCAAAATTGTGAGGTACTGGAGAGCACCTGCAACAGACTGGTAAAGGGAGCC TCCTTAAGCACATAGAGGGGTTTGTTGCATACCAAAGATTTGTCCTTGCCTTCCAAACATGGAGGATTGGACATTTAAAC TTCCTCTTCTAAAAACCATAGTCTATAAGTAAGTGCCAGAATTAGAATAATTCGAATAGTAACTGAATAATAACAGGAAA TAACTAACAGCTCACTTACTATAACATTAGCAATAATGGTGACATAACTGAAAACGCATATCTATGTCTAAGACTCCCCC AACTAGGGAAGGAGCCTCGTCCTAAAGGTGCCTTCTGAATCAACAGAAAATGAGACAAACCAGCAACAGAAGTGAAACTG CAACCATGAAAGCTAGAGAAGCTACAAGAATAGCTATTACTATTAGGGATTGAATTGTTGCTGAAATTGTTGTGGTGGTA TAGGAACAAAGATTTAATCGAAACTATGATAGAAAATGGATGCATTGTGTTTGGATTTGATCCATATAGCTCCTTTTTCT GCCACTTTAGCGGCCGCAACGGCCATTACACTTAACTACAACCTTTGCAGCAACCAGGAGCGTAGACTCTCCTCTTCCTA CTCTCATAGTTGCTCCTAATTGGAGGTCTATTCCTATGTAGGGTATTGATAATGAATTTTGATTAGTGTTAATATTTTTG CGCAATAGTACAGGACATTATATACTTGGGTGGCTATAGGGTAGGTGATCTGACAGTTAAAATTTAAAAGGGTGGAACAT CAACCTAGGATGCTAGTGTTTTGCCTCCAATGAATGATTTGATGGTAATTTGTCTTTGTTATGCATTGGTAAATATAAGA TCTGTCTCTCCTGAACATTTAGTTTGGTATAAATTATATGTGGATTTTAGTGCTGTTTTTATTTTTCAATTTTGCTTGTG CACTGTGTAGTTTATCATGCAACTGTGATGCTCAAGTTACACTTTGCAGGGTCAAAAGTCTCTGGCATTAGATACAGCTA TTGGAATGTGGCAATTATTATTCGCTGAGAAGCAGTGGCCCCTGGTTGATCATTGGTGCCAGTTCCTGCAGGTATTAATA TTAATTATGCATCTTTTTAGCTTTCAGTGAATACGTTTAAAACTTTCTTATTAGGATAGATTTCAGTTTCACTGCAAGAT CAGATACCCTCTGCTCTTTTTATTATGTTTTCTTAACTTTGAAAATTTTGATGCTACTTACTCAGGCGCGGCATAACAAG GCAATATCTAGGGACACATGGTCTCAGCTTTTGGAGTTTGCAAAGGTAAACTAATAAACTATTATCTACTGTAATAAAAT TCAATAGGTGGTACCCTCATAATAATGTCCCTTCTTGATGTGGATTTATTGTTTCATGAATATTTAAGCATGGTCGCTGC ATGTAACAGAACTGAGAGGTGTTTGGGGACAGGCTTATTGGAGCTTATCTACTAAAAAATACTAAATAAGCTCCAAAAAG TGTTAATTGGTCCGCATCCAAACGGGCTGTTACAATAGTTCTAACAGAATAGGTAACAGACTTCACAATAGTCACTGCTT GTAACTTAATTTACTGTAGTTGTAACGGAACAGGTAACTAACTGACTACAATCAGTTAAATAATTCAGTAGGGGGAGGTC AGACTTTAAATTGGGTGCAGTAGAATAGAATAAAGATCTTAATTATAAGCGGAAAGGTTGGAAGGCCTCATACCATCGAA TTCTCCCGGAATACTCGTGGAAAGAATTTGTTTGTTTTCCTAATCCCAAGTTCGACACCGCACCGGTACAGGATTGGGCA ATTAGGTTTTCCGGTCAATAATCAATATAACACCATTTTCTGATTCAGTTTTTATTACTGTCCATTGATTGAGATGAAGT CCGGTTTGATTTTGTACAAACTTTTGAAATGACAATGCAAGCGGGACTTTTGATGCTGCTGGTCTTTTTGTGATCGTATG TTTTTAGCCTTTTTAGGAAGTAACACACAAACCACTAATATTTGTCATGCTATGTTATGCAGACTGTTGGCTCAAGTTTA TCTGATTATGATGCTGAAGGTGCCTGGCCGTATCTTATTGATGAATTTGTCGAGTATCTGAATGAAAATGGCATTACCCA AAATGGTCAGATCTATGATTCTAGTCTAAAACTATGATGCATTCGGTGAAATGCGGATTGAGAAAATTTGATCTCTGGTC CTTAATGATATGAGTTTTGCTATTTGTGATTGAACTCTTCTTTCTTTAGCCTAAATATGGAAAAAGAAGAGGGCATGGCT GCCGGAGAAATCTCATTCTTGCGGACAAGTAGTAAGCACCATACACTCGGAGATTGTTGATATGGTATATGAACTTCCTT GGGTGTATTTTGGAATTAGTGAGAGGAGCCTACTGATACCATGTTATAGTTTATTGTCCCTTTCAATTAAATAATTAATT CTTGTACCGTGTCTTTGTTAGATAAAATATTTGTGATTGTGATTAACTGTCCCTGTTTCTGTTCTATTTCTGTCATTTTA TATTATGGAGTAGGATCCACTCATCTTCACTTGTCTAGGTGCTAGAGTTGAGCTCAGATACCAATTGGAATAACATGGAT AAAAAGGGGGTTGGTTGATTTGTGTCAATTTTTATAATTTATATATTTTTGTAAAGAATCAAGTTGAAGATAAAATGATT ACACTAGCTTGATAAAAAAAAATATAATTTATGCTGTTAAGGTATTAATTAACCTTTTCATGAGTGGAATTGCCCACAAA ACATGAGTTTTGATAAACTTCATTTTATTAGAGGCTAACGTACATCCATCGTACATAACTATGCAATGAAGGTATACATG AAACGAGCACTGTCGTTTTATTCGATCTTTACGTAGTTCTGTCTTAGGTAACTAAAAATGAAATGAGCACCATCAACTTA TATATTCAGGAAAATAACATAAAGAAAGTAATGGAAAGAAAGGAAGTAAAAGCTACCACTTCACGTGTTTTATGTTATCT CGAATATAAGATTTTTATTTGTGGCCAAAAGCTTGGTCTGAAGAATCTCCCGTTGGGGATTAGGGTTAGGGTTCTTCTTT ATCTCCTTCACCCATCTATGGCGGGTAATCTCCATAGATATTTTCATATCGCAAGACTGTTGGGTCTTCAAAATATTGCT TCAATTATTGGAACACTATTAAAGTCTAGCTCAAATAGGTTCCATATTAATTGAATGTCACTGAATTCTCAAAAATAATT TCAAGATTTGTCAAGTCTCTAAATTTTACCAAGTT
CDS sequence (LotjaGi3g1v0133600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCACAAATTGGGGAGAGGCCATCGCGATAAACTCCAGCAGTTCATAACAATAACTGGAGCTAGTGAGAAAGTAGCACT GCAGTCTCTGAAGGCTAGTGATTGGCATCTTGAAGGAGCATTTGATTTTTTTTATAGCCAGCCCCAGCTTAAAGCATCTA CAGATTCTAGACACTTGGAGGAGCTATACAATAGATATAAAGATCAGTATGTTGATATGATTTTGGCAGATGGTATCACT CTCCTTTGCAATGATATTCAGGTGGATCCTCAAGATATAGTAATGTTAGTTCTTTCGTGGCACATGAAGGCTGGCACCAT GTGTGAATTTTCCAAGAAGGAGTTCATTGAAGGCTTACAGTCTCTGGGGATTGATTCATTGGAGAAGTTCCGTGAAAAGA TACCATACATGCGCTCTGAGCTGAAAGATGAATATAAGTTCCGTGACATATACAACTTTGCTTTCAGCTGGGCGAAAGAG AAGGGTCAAAAGTCTCTGGCATTAGATACAGCTATTGGAATGTGGCAATTATTATTCGCTGAGAAGCAGTGGCCCCTGGT TGATCATTGGTGCCAGTTCCTGCAGGCGCGGCATAACAAGGCAATATCTAGGGACACATGGTCTCAGCTTTTGGAGTTTG CAAAGACTGTTGGCTCAAGTTTATCTGATTATGATGCTGAAGGTGCCTGGCCGTATCTTATTGATGAATTTGTCGAGTAT CTGAATGAAAATGGCATTACCCAAAATGGTCAGATCTATGATTCTAGTCTAAAACTATGA
Protein sequence (LotjaGi3g1v0133600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MHKLGRGHRDKLQQFITITGASEKVALQSLKASDWHLEGAFDFFYSQPQLKASTDSRHLEELYNRYKDQYVDMILADGIT LLCNDIQVDPQDIVMLVLSWHMKAGTMCEFSKKEFIEGLQSLGIDSLEKFREKIPYMRSELKDEYKFRDIYNFAFSWAKE KGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQARHNKAISRDTWSQLLEFAKTVGSSLSDYDAEGAWPYLIDEFVEY LNENGITQNGQIYDSSLKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 245 | 245 | 5.4E-87 | – | |
| SUPERFAMILY | 7 | 46 | 40 | 8.67E-8 | ||
| CDD | 8 | 48 | 41 | 9.33807E-16 | – | |
| PANTHER | 9 | 249 | 241 | 2.1E-138 | – | |
| Pfam | 9 | 47 | 39 | 1.2E-10 | – | |
| PANTHER | 9 | 249 | 241 | 2.1E-138 | ||
| ProSiteProfiles | 54 | 242 | 189 | 55.721 | ||
| Pfam | 130 | 240 | 111 | 6.8E-37 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi3g1v0133600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…