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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0136700 |
| Transcript ID | LotjaGi3g1v0136700.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Peroxidase; TAIR: AT4G33870.1 Peroxidase superfamily protein; Swiss-Prot: sp|O81755|PER48_ARATH Putative Peroxidase 48; TrEMBL-Plants: tr|A0A072VAH0|A0A072VAH0_MEDTR Peroxidase; Found in the gene: LotjaGi3g1v0136700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:17474726..17477600) extracted from Lotus japonicus Gifu genome v1.2.
ATCATTGATTGCGATTTGGTGTCAGTCAGTTATAGCAATTTCTCAATTCCCGCTTCTTTTCTTTCATCTTCCCTCTTCTT TCTCCGATCAAGATTCTGCAAAATGCGAAGCTCCTTCACCGCATGGCTAGTGGTGGCGCTCGTCATCCCAGTGCTTCTCT CTCTCAGGAACCCACGAGGTGAAACCGATAGCACTGGAACCCGCAAAGCTTCTTCAACTCCACCTTCTTCGTATACGGTG AAGCTAGCCTCCACCACCAGAACCTTCGAGTTCAATGAGAGGATCAGAGATGGCTCCAATCTTGAATATGACTTTTACAG AGACACTTGTCCTCAGGCGGAGGACATTGTCCGCTCCGCCGTCACTCGCATCTACTTCGACCACCGTGATGTTTCCCCTG CTCTTCTCCGCCTCCTCTTCCATGATTGCTTCATCGAGGTTTTAGGGTTTCTTGTTTTTCATCAAATGTTTTCATTTTGC TGTGTTTTGCTTTCAAGGTCATCAATTTGGTCTTTTTGTTATCTGAATTCAAATGGGTATTGATCTTTTGGTGTTATTTT CATCTGGGTCAATTTTTTGTTTCGTATTTTGATCCTGAAGACATGGGTTTTTTCTCTGTGATTTTGTTCCAATATCATAA TCGCAGTCTTTTTGTTACATTAATTCAAATGGGTCTTGAATACTTTGCTTGATTCTGCTGTGTTTTTCAATTTTTCAGTT TCTATAATAGGAATTGGGTCAATATCTCTGTTTTGTGGAAATTGGAATAGTGAATTTTGATCATCTTGTACTATTATCTA AGATTACCTTTCTTGTTGATTTATTAGATGCTTTTCTTTAAAGAAGCTAGTTGTTTTTGGTTTTGTTTTGGTATTCTTAT TGCTTGGTTGTTGCTGATTCAGGGTTGTGATGCTTCATTGCTGTTGGATGAAAATGGTGATAGAAACAGTTCAGTTGAGA AGCAGGCTATTCCAAATCAGACCTTGAGAGGCTTTGACCAAATTGACTTGATTAAGGAGGAGGTGGAGCAAGCATGTCCT GGGACTGTGTCTTGTGCTGACATACTAGCTCTCGCCGCAAGAGATTCCGTCCTTTTGGTTTGTTTCTGTGCCTATAATCT TCTTCTTTGTTTCCAATGCACTGACTTTTGTAGTTACTATATCACAAGTTTCAATATGTATTGATATTTGAGGACTTTTT GATTGTGCAAATGAGAATAGTAAGAGAGTTTGTCAGTTAGATATCTGAATTATGCTGTATCGTTGCTGTAATAGCAATTG TGGAAAGTGGACTGTTGTAAATGATTGTGTCGTAAGCGAGTTTATCTGTTAAATATCTGTGTTATGCTGTATTTTGGCTT TAATTGCAATTGTGGAAAGTTGAAACTGTTGTGAATGGCTGTGTTGATATGCATAATGATTGATGCTATGATAATATCTT TGTGGAATTGTTTATGTCTGCAACACCATCCTCTGCTAGACACAGAGTGATGCCAACTTCTTTTTCTTATTATCTATGCT CACATGATTGTTGTCCTCTGGAAAACCAAACTTGTTCACTAAACCATTTAACTATAACTTGTTCATCCTCTTTCTAGGAA TGGCTTGTCCCATTTGTGCATGTTTTCCCTTGACCATGTCCCTCCCGCTTCTACTTTGCTGCATTTTTGGTCTGTCTCAT CTCATGTTCAATCATCTTTAACCTTGATAATTGAAGCAAGTAAACTCTTCAATTCCTTAGTTCATATATTGATATTCTGA TTTCGGTGTAGCAAAGCTGAATACCACTTTTTGTTGCTTGTCTTACACATCTTGAAAGTTCAGCATTATACATTTCTTGA TAGTTCAGCATGATTGCACCTTTGATATGTTTTCTGGACATGGCCATGGCAGGCTGGAGGACCATTCTATCCAGTTTTAA CGGGAAGACGTGATAGCCGTCAATCTTATTTCGTGGAAGCAACTGATCAGATTCCAAGACCTGACGATAACGTTACGCGC ACACTGCATCTCTTTAATCTCAGAGGATTTAATGAAAGAGAAACAGTCAGCCTTCTTGGTAAGTAGGATTTAATGATAAC ATTTGTTTTCACCCTTATTTCTAATGGTTTTCAATGAATAGAATCTGACTAAATGAGCTCCATTGGTTTCTTGATCATAT GAAGGAGGACATAACATTGGGAAAATAGGCTGTGATTTCATTCAGCAAAGGCTCTACAACTTCCAGGGCACAAGGAACCC AGACCCCAGCATACCTCTTGATTTCCTTCATCAGATGAGGCTAAACTGCCCAGACAACAACCACAATATCAGCAGCAGTG ATGAGTTTTCCACGCTCGAGATTTCAAAGCCAATGCCTGTTCACTCTGACCAAAGCATGTCTTACAAGCAAGCATTGTCG TCTGCAGTATCATCAGGGGCAGCATTCGACACTCACTACTACCAGAGCTTGTTAAGAGGAAGAGGGCTACTATTCGCTGA TCAGCAACTGATGGCCGAGGAGAGGACTGCCAGATTGGTTTCTGCTTATGCTTCAGATGATGGATCAACCTTTCGCATGG ATTTTGCCAGGGTCATGTTGAAAATGTCTAATCTAGATGTTTTGACTGGAGCTCAAGGTCAGATTCGTCTGAAATGCTCG CAACTGATAAGTTCTTAACTGAGATTTGTTCCCTTTGGAAGTGTAGATATGTCATTCTCTTAGTGTCTGGTTTTCCTTGT CAATATGTCTGAATTCAGTATTGTACAGTTTGGTATAGCAAATTTTTGTCCTGTATGTAATGTGGCAGGGTTACTAACAG AAAAGATCTCATGTACATTTGAGGATAGTTTGACCGTGAAAAGCGGCAGTGAGTTACAAAATTTATAGATTTTGG
CDS sequence (LotjaGi3g1v0136700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTTTTCTTTAAAGAAGCTAGTTGTTTTTGGTTTTGTTTTGGTATTCTTATTGCTTGGTTGTTGCTGATTCAGGGTTG TGATGCTTCATTGCTGTTGGATGAAAATGGTGATAGAAACAGTTCAGTTGAGAAGCAGGCTATTCCAAATCAGACCTTGA GAGGCTTTGACCAAATTGACTTGATTAAGGAGGAGGTGGAGCAAGCATGTCCTGGGACTGTGTCTTGTGCTGACATACTA GCTCTCGCCGCAAGAGATTCCGTCCTTTTGGCTGGAGGACCATTCTATCCAGTTTTAACGGGAAGACGTGATAGCCGTCA ATCTTATTTCGTGGAAGCAACTGATCAGATTCCAAGACCTGACGATAACGTTACGCGCACACTGCATCTCTTTAATCTCA GAGGATTTAATGAAAGAGAAACAGTCAGCCTTCTTGGAGGACATAACATTGGGAAAATAGGCTGTGATTTCATTCAGCAA AGGCTCTACAACTTCCAGGGCACAAGGAACCCAGACCCCAGCATACCTCTTGATTTCCTTCATCAGATGAGGCTAAACTG CCCAGACAACAACCACAATATCAGCAGCAGTGATGAGTTTTCCACGCTCGAGATTTCAAAGCCAATGCCTGTTCACTCTG ACCAAAGCATGTCTTACAAGCAAGCATTGTCGTCTGCAGTATCATCAGGGGCAGCATTCGACACTCACTACTACCAGAGC TTGTTAAGAGGAAGAGGGCTACTATTCGCTGATCAGCAACTGATGGCCGAGGAGAGGACTGCCAGATTGGTTTCTGCTTA TGCTTCAGATGATGGATCAACCTTTCGCATGGATTTTGCCAGGGTCATGTTGAAAATGTCTAATCTAGATGTTTTGACTG GAGCTCAAGGTCAGATTCGTCTGAAATGCTCGCAACTGATAAGTTCTTAA
Protein sequence (LotjaGi3g1v0136700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLFFKEASCFWFCFGILIAWLLLIQGCDASLLLDENGDRNSSVEKQAIPNQTLRGFDQIDLIKEEVEQACPGTVSCADIL ALAARDSVLLAGGPFYPVLTGRRDSRQSYFVEATDQIPRPDDNVTRTLHLFNLRGFNERETVSLLGGHNIGKIGCDFIQQ RLYNFQGTRNPDPSIPLDFLHQMRLNCPDNNHNISSSDEFSTLEISKPMPVHSDQSMSYKQALSSAVSSGAAFDTHYYQS LLRGRGLLFADQQLMAEERTARLVSAYASDDGSTFRMDFARVMLKMSNLDVLTGAQGQIRLKCSQLISS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 29 | 29 | - | – | |
| Phobius | 1 | 8 | 8 | - | – | |
| SignalP_EUK | 1 | 29 | 29 | - | – | |
| ProSiteProfiles | 1 | 27 | 27 | 5.0 | – | |
| TMHMM | 7 | 24 | 18 | - | – | |
| Phobius | 9 | 24 | 16 | - | – | |
| CDD | 13 | 304 | 292 | 1.58117E-119 | ||
| PRINTS | 13 | 33 | 21 | 7.5E-32 | ||
| Pfam | 15 | 270 | 256 | 1.9E-55 | ||
| ProSiteProfiles | 23 | 307 | 285 | 55.98 | ||
| PANTHER | 23 | 306 | 284 | 3.5E-138 | – | |
| PANTHER | 23 | 306 | 284 | 3.5E-138 | – | |
| Gene3D | 24 | 304 | 281 | 3.4E-86 | – | |
| SUPERFAMILY | 25 | 305 | 281 | 4.13E-73 | ||
| Phobius | 25 | 29 | 5 | - | – | |
| Phobius | 30 | 309 | 280 | - | – | |
| PRINTS | 54 | 67 | 14 | 7.5E-32 | ||
| PRINTS | 73 | 83 | 11 | 7.5E-32 | ||
| PRINTS | 74 | 91 | 18 | 9.7E-19 | ||
| PRINTS | 92 | 104 | 13 | 9.7E-19 | ||
| PRINTS | 92 | 107 | 16 | 7.5E-32 | ||
| Gene3D | 118 | 286 | 169 | 3.4E-86 | – | |
| PRINTS | 139 | 151 | 13 | 7.5E-32 | ||
| PRINTS | 140 | 155 | 16 | 9.7E-19 | ||
| PRINTS | 224 | 239 | 16 | 7.5E-32 | ||
| PRINTS | 226 | 241 | 16 | 9.7E-19 | ||
| PRINTS | 240 | 257 | 18 | 7.5E-32 | ||
| PRINTS | 281 | 294 | 14 | 7.5E-32 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Peroxidase activity | Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O. | ||
| Biological process | Response to oxidative stress | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals. | ||
| Molecular function | Heme binding | Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring. | ||
| Biological process | Hydrogen peroxide catabolic process | The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2). | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi3g1v0136700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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