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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0145300 |
| Transcript ID | LotjaGi3g1v0145300.2 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Nucleotide/sugar transporter family protein; TAIR: AT3G14410.1 Nucleotide/sugar transporter family protein; Swiss-Prot: sp|Q94EI9|PT314_ARATH Probable sugar phosphate/phosphate translocator At3g14410; TrEMBL-Plants: tr|K7MDU9|K7MDU9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0145300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:19325553..19329107) extracted from Lotus japonicus Gifu genome v1.2.
AGAACACCTCCTCCTTCCTTCACTCTTTCTTCTTCTCCCTCCCATCCCCTCCTCTCCTCCTTGTTTCTGGCCAAACAGAA CTTAATTCGCCCATCTCCTCATATTTCTTCCTCCTGTCCTCCATGTCTGGTCGTCACTTCAGTCCTCACTGCCACTGATT CCATCTCTATCCCTTGCTTCGTGTAAGTTTTTTTTTTCTTTTCTGATCACCATCCTTCTTCCTCTTGTAGATCCAAGTCT TCCTCTTTAAGTCTTTATCGTGTAGATCTCTTCCTCCTCATCCTCTTCAAACTAGACCATTTACATTATGTTTCCGAAAC AATAACCCTAAAATACCCGCTGAAAATGCCCCAACGTTAATTTCTCAAGTGTATTTTTTGGGTTTTTGTCAATCCCATCG AATAGTGGAGAAATACTTATTGCTTTAAAAGTCGATTTCATTAAATTCTGATTATGTCTCCAAATTTCAGTTGTAATTTA ATCCTACTTATTTCAGATATGCTACTTCAGTAGTGCCAATTGGGGCCATGTTTGCAATGACTCTTTGGCTGGGAAATACT GCATACTTATATATTTCCGTCGCATTTGCACAAATGTTGAAGGCAATCAGTAAGTTACAGTAAACCTTTTATTTTACTAC CTATGTTCCAAAATGATTGTTGTTTAAGGTTATGCACATAGTTTAAGAACTCTTTTATTGGTAAAAAACTTGACCAAAAA ACTGTTGTTTATATTTACCTACGTCATTCATTGTCCTCCAGTTTTCACAACTAACTCACTCATTAATTAATAACAGACAA CAGTAACAAAAAAGAATAGTGATTGGTCAAAATAAGAGGTGATAGGTGAGACCAAAATTATTAAATGAGAGTATAGATGG AAAAAATGCGATAAATGTCTTGAATTTCTAAAATAGCAAATAGTTTGGAATAAAGGGGAAAGCAAAAACAACAAAGGTTT TAGAATAGAGGTAGTATGTGTTATTATTAGGTATTTTTAGCCCTTTATGATATCTACCAATGGAAAGTATAATTGCTAGA TGTGTCTTTTGAGATATTTAAAATAAGAATCAGATCAGTTGGTTAATCAACTTGCCTTAGGTGTTCAATATGTGGAGACT GTATAATTTTTCACATTATTTTTCCACCAAAATGGCAACTAATTGCATAATCACTCTGGTTCGTCAAATGTCTATCACAG TGCCTGTAGCTGTTTTTCTGCTTGGAGTAGCTGCGGGACTTGAGTTAATGAGCTGCAAAATGCTCTTAATCATGTCGGTG ATCAGTTTTGGTGTTCTGGTTGCTTCTTACGGAGAGATAAATATAAACTGGATTGGAGTAGTATACCAAATGGGAGGTGT CGTTGGTGAAGCTTTAAGACTTATCTTCATGGAGATTTTTGTTAAGAGGAAGGGTCTTAAGTTGAATCCTATATCCGTGA TGTATTATGTTAGTCCCTGCAGGCAAGTGTTTCTTTTCATAATTTTACTTACTATTACGCTAGTTTTTAAATAAATTGAG TGTAAATTAATGCCTGTACAAATAATTTCCAACTGCAGCGCACTTTGTTTATTCCTTCCATGGATATTTCTAGAGAAGTC AAAGATGGATGACCATGGACCATGGAACTTCCCACCTGTTTTGCTTCTCCTCAATTGCCTTTGCACTTTTGCTCTGAACT TATCAGTTTTCCTTGTGATTACACATACAAGTGCTTTAACCATTCGTGTTGCTGGAGTTGTCAAGGATTGGGTGGTTGTC TTACTGTCTGCTGTTCTGTTTGCTGATACAAAGTTAACAACCATCAATTTGTTCGGTTATGGAATTGGTAAGTGTCTGCA ATGCAATGTATGGCATTCTAAATTTTCCTGTCTCGTTAGACATATCCTTTGCGGAATTATATAACTCTTCTCTTAAATGC TTGTGTACTTTTGCATATTCCACAGTCCAGGAAAATGGGTAGCCCAGTATCGGGTGTCCCCTGGATGTCTAACTGCATAT TAACATATATAAACCCGGCAAACAAATACTGGCCTTTACTTTGGAAATTGTGTTAAATCTAAGATCAAATCAATTAATAG TTATGATTCTAATATTGTTCAACATAACGAATATAGATTTCGTTTAACAACACCTGTTGATCTAAATGATTAGAAGCCTT GTTTTCTTTATGTATTGTGTTGGATTTAAGTCTTTTAAATGTAATAAACAGGCTTGGAGAGCTTTGTCCCTTAAGTGGGT TTATCCAATTCAACTTAGATTAGTTGGGTCTCAACATGACTTTTGGATATTGTGGGTCTCAAACCAAGAAGAATATTAAG TATTTTGATTCTGTTTATTTTAGATGGATTTATTCTCACTGATGGACTGATTGAGTAGCACAAGAAGTTTACTTAGCTGA TTAAAAGTAGGTGATATGATTGATTTTTTACGGAATATTCCTGATAGCAGTACAAAGGCTGTTCTCAAATTAAAGTTAAA TGGTACAATATAAGAACTGTACTAATTGTAAGGTTTGGAGCTATGAATCTTGCTAAATGAAAATTAAAGAAAAATAAGCA GCTTCTATAACCAATGTTGTAAATTTTCATACAGCCATTGCAGGGGTAGCAGCATATAATAATTTCAAGTTGAAAAAAGA AACTTCTCGAGCCACCATAGATGCCTCTGAGCATGATGAATCTACTCAAAGGGAAGAGTCTCAGCCTTTAACAAGTAGAT CGTAGCAGTCTGAGTTACTCAAGGCATGTATATAATGTATTTGAATTTGTCATTTTTCTTCCCATAGTGTTACTTCGTCT TATAGAGTATTTCTTTTATCTCTTTCAGTTGTCCATGTCCTGTGCAGAAGTTTATGAGAACATATACTGATAACGACACA GTTCTCATATAATGTAGCAAGAAGGCATCAAATGTTCATGCAGTGTTTCAGCTAATTATAGATCGGGAAAATAATATGCA GATCAAGAGCAGTATGTGCAGATGTAATATACAAACTCAATCCTTTCATATAGAGGTGCTGGGCCATGGCATTTGATTTT TTTGAAATATTTGAAGTCATTCACAATCACAACGATTATTTTTTTGATACAATTGCCAGTTTCAACCCTAGCAATTCACT ATTTCAAGTTGAATGATAAAGATTACAAGCCCTGGCATCCACCATTTATTATAATTGGGTCATGGCTTGATATATACTGC ATTTTCTTATACAGTTGAAAACTTGTAAGATTATTTATTGTTTTATTAAATTGTAATTTGATAAAATTCAATGTTACGGA TTGGTTCAATTTGGGAATATTTGCCCTGGTGTAATCTTTTTGATCTGGTTGCTCTCAATGTATTTTGTGCATTATCTCGT TGGTTCGGGTTAGTCCATTATAGGGTATAAATGTGATGAGAGGTGGTACTAAAGTTAGAAACCGAGTGTTTCATCTTATG CTAGATGTATTTAAAGAAGATCTATATTTTGGTATCATGGCCATTTTTGGCTTATAGAAATCTGTTTATAAATGTGATAG CATGTTGCCTTGCAGTATGAGGAAATATTTGCTGT
CDS sequence (LotjaGi3g1v0145300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTGCAATGACTCTTTGGCTGGGAAATACTGCATACTTATATATTTCCGTCGCATTTGCACAAATGTTGAAGGCAAT CATGCCTGTAGCTGTTTTTCTGCTTGGAGTAGCTGCGGGACTTGAGTTAATGAGCTGCAAAATGCTCTTAATCATGTCGG TGATCAGTTTTGGTGTTCTGGTTGCTTCTTACGGAGAGATAAATATAAACTGGATTGGAGTAGTATACCAAATGGGAGGT GTCGTTGGTGAAGCTTTAAGACTTATCTTCATGGAGATTTTTGTTAAGAGGAAGGGTCTTAAGTTGAATCCTATATCCGT GATGTATTATGTTAGTCCCTGCAGCGCACTTTGTTTATTCCTTCCATGGATATTTCTAGAGAAGTCAAAGATGGATGACC ATGGACCATGGAACTTCCCACCTGTTTTGCTTCTCCTCAATTGCCTTTGCACTTTTGCTCTGAACTTATCAGTTTTCCTT GTGATTACACATACAAGTGCTTTAACCATTCGTGTTGCTGGAGTTGTCAAGGATTGGGTGGTTGTCTTACTGTCTGCTGT TCTGTTTGCTGATACAAAGTTAACAACCATCAATTTGTTCGGTTATGGAATTGCCATTGCAGGGGTAGCAGCATATAATA ATTTCAAGTTGAAAAAAGAAACTTCTCGAGCCACCATAGATGCCTCTGAGCATGATGAATCTACTCAAAGGGAAGAGTCT CAGCCTTTAACAAGTAGATCGTAG
Protein sequence (LotjaGi3g1v0145300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFLLGVAAGLELMSCKMLLIMSVISFGVLVASYGEININWIGVVYQMGG VVGEALRLIFMEIFVKRKGLKLNPISVMYYVSPCSALCLFLPWIFLEKSKMDDHGPWNFPPVLLLLNCLCTFALNLSVFL VITHTSALTIRVAGVVKDWVVVLLSAVLFADTKLTTINLFGYGIAIAGVAAYNNFKLKKETSRATIDASEHDESTQREES QPLTSRS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 234 | 234 | 1.4E-142 | – | |
| Phobius | 1 | 11 | 11 | - | – | |
| PANTHER | 1 | 234 | 234 | 1.4E-142 | – | |
| Pfam | 5 | 213 | 209 | 1.3E-19 | ||
| Phobius | 12 | 41 | 30 | - | – | |
| TMHMM | 13 | 35 | 23 | - | – | |
| Phobius | 42 | 47 | 6 | - | – | |
| Phobius | 48 | 65 | 18 | - | – | |
| TMHMM | 50 | 72 | 23 | - | – | |
| Phobius | 66 | 70 | 5 | - | – | |
| Phobius | 71 | 95 | 25 | - | – | |
| Phobius | 96 | 106 | 11 | - | – | |
| TMHMM | 102 | 124 | 23 | - | – | |
| Phobius | 107 | 126 | 20 | - | – | |
| SUPERFAMILY | 115 | 214 | 100 | 6.8E-7 | – | |
| Phobius | 127 | 137 | 11 | - | – | |
| Phobius | 138 | 161 | 24 | - | – | |
| TMHMM | 139 | 161 | 23 | - | – | |
| Phobius | 162 | 167 | 6 | - | – | |
| Phobius | 168 | 190 | 23 | - | – | |
| TMHMM | 168 | 190 | 23 | - | – | |
| Phobius | 191 | 195 | 5 | - | – | |
| TMHMM | 194 | 213 | 20 | - | – | |
| Phobius | 196 | 215 | 20 | - | – | |
| Phobius | 216 | 247 | 32 | - | – | |
| MobiDBLite | 225 | 247 | 23 | - | – | |
| MobiDBLite | 225 | 239 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0145300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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