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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0145300 |
| Transcript ID | LotjaGi3g1v0145300.6 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Nucleotide/sugar transporter family protein; TAIR: AT3G14410.1 Nucleotide/sugar transporter family protein; Swiss-Prot: sp|Q94EI9|PT314_ARATH Probable sugar phosphate/phosphate translocator At3g14410; TrEMBL-Plants: tr|A0A072VAK0|A0A072VAK0_MEDTR Triose-phosphate transporter family protein; Found in the gene: LotjaGi3g1v0145300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:19327096..19330805) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCGGATCCGAAGAAGGAGGGTTTCCTCACCTACGCCTATCTTCTTCTCTATATCGCTCTCTCCAGTGGCCAAATCTT CTTCAACAAGGTTAAACTCTCGCACACTCTTTGTTTCCCGGGAAAATGCGGGAAAACATTTTACCGGAAAATTATCATCG AAATGGTTCTGTGCTGATTTCGAAGCTAGGAGGATTCAAAGTCTTGTTTGTTTGTTTTTATTATGTTTTTTCATGTTACA TAATTTGTTTTTCTAACTTGTAGTCTAGGTTAAATTTGAGGCTTGTGTTGTTGGATTTTGTCAGTTGTGATTGGTAGTTG AGATTTTTGTTCAGTTGTAATGGAAACATTTTAGTTTTAACCTTTCTGTTTGTGAAATAGGATTGAGTGTGATAGAGTTG AAATTTTTTGTACATTCACCGAGTTTTTCATGATGTTTGTTTCTTGATGGTGGCATCAGCACATGTTGGTTTTTATGGTT TTATTGTCTTTTGGAGTGATCCATGCAGGAATTATTATTGTCTTCCATTTTTTTTACTAGATTTATGCTTGATTTGAGGA ATTAATTGAGAAAATGTATAAAAACTGTGTCGTTGTGTAGCTGATGCGTGTCGGATTTTCAATTTGTTATGTGCAGTGGG TTTTGTCATCTAAGGAATTTAACTTCCCTTATCCTTTGGGGTTGACTCTACTTCACATGGTCTTCTCCTCTGTTGTGTGT TTTATATTAACCAAAGTCCTAAAGGTACGTCTTTATGCTTCGTGTTGAATGTTATTGAATACGTTCCTATTATGCAATGC AGATCTTTTATCTATTTCTTTCAGGTTTTGAAGGTTGAGGAGGGAATGACTCCTGAAATGTGAGTAAGAAAGAAGATTTC TGTATGATACAGCTGATTTATAGTGTTTTATGAATGAAGTTTTTTCTTTTGTCATACTTTCTCTGGCTTTTGATGACTGA AATGTAGAAAATAAGACGCAAAATCATTGAAGATATATCCTTTTAAGAGTCTTATAATCTGTGGAAAATAAATAATCAAT ATCTAGTGTCTATTCAAATCACTTAATTCTATACAATTTATTAAGCCGGTGTTGGTACCATGTGATGAATTACAGATGAC TTTAACTTATGCAATACATGCATGCATTAGTATGGTGGTACCAATCAAACAATTCAGTGATTCATTGTTGTCGTTTCTTT TTTGGGTGCCTTTCTTTCACCAATTTCATAAGAGAAATTAAAGATAAGCTTATAATGTTAAATTAAAAGAATTGAAGTCC TGAACCTTATTTGATTTTTTTTTGCTGCTCTACTTTTATTCGCTTAACACAGGGGCTTTACACTCACTCCTCACTCTATG CGCACCTTGGCTAAGCCATTGTTTTGTTTCCTTCTGTTATGAAACATAGGTTTCACGCAGTCACTTTATGGGACTCCTAA GGCAAAGTAGGAAGGGAAGAAGGATGTTACCACTTACCTGAGTACATTGTACTTGATAATAGATGCTGAACTTAGGTAGT GTTTGACCCAACTGTTTTTGGGTTTCTCTTCTACTTAGAAGGAGAAATTGGGCTAAACTAATTTTTAAAAAAGCTCCTTA AATCTTAGTAAGGACAAAGAAAAAGTAGCTTCTCAACAAACTGCCTAGAGGAGTTTTTTATTATTTTTTTTTTATTTTAT TTTAAATTGCCGCTGTCAAGAACACCTCCTCCTTCCTTCACTCTTTCTTCTTCTCCCTCCCATCCCCTCCTCTCCTCCTT GTTTCTGGCCAAACAGAACTTAATTCGCCCATCTCCTCATATTTCTTCCTCCTGTCCTCCATGTCTGGTCGTCACTTCAG TCCTCACTGCCACTGATTCCATCTCTATCCCTTGCTTCGTGTAAGTTTTTTTTTTCTTTTCTGATCACCATCCTTCTTCC TCTTGTAGATCCAAGTCTTCCTCTTTAAGTCTTTATCGTGTAGATCTCTTCCTCCTCATCCTCTTCAAACTAGACCATTT ACATTATGTTTCCGAAACAATAACCCTAAAATACCCGCTGAAAATGCCCCAACGTTAATTTCTCAAGTGTATTTTTTGGG TTTTTGTCAATCCCATCGAATAGTGGAGAAATACTTATTGCTTTAAAAGTCGATTTCATTAAATTCTGATTATGTCTCCA AATTTCAGTTGTAATTTAATCCTACTTATTTCAGATATGCTACTTCAGTAGTGCCAATTGGGGCCATGTTTGCAATGACT CTTTGGCTGGGAAATACTGCATACTTATATATTTCCGTCGCATTTGCACAAATGTTGAAGGCAATCAGTAAGTTACAGTA AACCTTTTATTTTACTACCTATGTTCCAAAATGATTGTTGTTTAAGGTTATGCACATAGTTTAAGAACTCTTTTATTGGT AAAAAACTTGACCAAAAAACTGTTGTTTATATTTACCTACGTCATTCATTGTCCTCCAGTTTTCACAACTAACTCACTCA TTAATTAATAACAGACAACAGTAACAAAAAAGAATAGTGATTGGTCAAAATAAGAGGTGATAGGTGAGACCAAAATTATT AAATGAGAGTATAGATGGAAAAAATGCGATAAATGTCTTGAATTTCTAAAATAGCAAATAGTTTGGAATAAAGGGGAAAG CAAAAACAACAAAGGTTTTAGAATAGAGGTAGTATGTGTTATTATTAGGTATTTTTAGCCCTTTATGATATCTACCAATG GAAAGTATAATTGCTAGATGTGTCTTTTGAGATATTTAAAATAAGAATCAGATCAGTTGGTTAATCAACTTGCCTTAGGT GTTCAATATGTGGAGACTGTATAATTTTTCACATTATTTTTCCACCAAAATGGCAACTAATTGCATAATCACTCTGGTTC GTCAAATGTCTATCACAGTGCCTGTAGCTGTTTTTCTGCTTGGAGTAGCTGCGGGACTTGAGTTAATGAGCTGCAAAATG CTCTTAATCATGTCGGTGATCAGTTTTGGTGTTCTGGTTGCTTCTTACGGAGAGATAAATATAAACTGGATTGGAGTAGT ATACCAAATGGGAGGTGTCGTTGGTGAAGCTTTAAGACTTATCTTCATGGAGATTTTTGTTAAGAGGAAGGGTCTTAAGT TGAATCCTATATCCGTGATGTATTATGTTAGTCCCTGCAGGCAAGTGTTTCTTTTCATAATTTTACTTACTATTACGCTA GTTTTTAAATAAATTGAGTGTAAATTAATGCCTGTACAAATAATTTCCAACTGCAGCGCACTTTGTTTATTCCTTCCATG GATATTTCTAGAGAAGTCAAAGATGGATGACCATGGACCATGGAACTTCCCACCTGTTTTGCTTCTCCTCAATTGCCTTT GCACTTTTGCTCTGAACTTATCAGTTTTCCTTGTGATTACACATACAAGTGCTTTAACCATTCGTGTTGCTGGAGTTGTC AAGGATTGGGTGGTTGTCTTACTGTCTGCTGTTCTGTTTGCTGATACAAAGTTAACAACCATCAATTTGTTCGGTTATGG AATTGGTAAGTGTCTGCAATGCAATGTATGGCATTCTAAATTTTCCTGTCTCGTTAGACATATCCTTTGCGGAATTATAT AACTCTTCTCTTAAATGCTTGTGTACTTTTGCATATTCCACAGTCCAGGAAAATGGGTAGCCCAGTATCGGGTGTCCCCT GGATGTCTAACTGCATATTAACATATATAA
CDS sequence (LotjaGi3g1v0145300.6) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGATCCGAAGAAGGAGGGTTTCCTCACCTACGCCTATCTTCTTCTCTATATCGCTCTCTCCAGTGGCCAAATCTT CTTCAACAAGTGGGTTTTGTCATCTAAGGAATTTAACTTCCCTTATCCTTTGGGGTTGACTCTACTTCACATGGTCTTCT CCTCTGTTGTGTGTTTTATATTAACCAAAGTCCTAAAGGTTTTGAAGGTTGAGGAGGGAATGACTCCTGAAATATATGCT ACTTCAGTAGTGCCAATTGGGGCCATGTTTGCAATGACTCTTTGGCTGGGAAATACTGCATACTTATATATTTCCGTCGC ATTTGCACAAATGTTGAAGGCAATCATGCCTGTAGCTGTTTTTCTGCTTGGAGTAGCTGCGGGACTTGAGTTAATGAGCT GCAAAATGCTCTTAATCATGTCGGTGATCAGTTTTGGTGTTCTGGTTGCTTCTTACGGAGAGATAAATATAAACTGGATT GGAGTAGTATACCAAATGGGAGGTGTCGTTGGTGAAGCTTTAAGACTTATCTTCATGGAGATTTTTGTTAAGAGGAAGGG TCTTAAGTTGAATCCTATATCCGTGATGTATTATGTTAGTCCCTGCAGCGCACTTTGTTTATTCCTTCCATGGATATTTC TAGAGAAGTCAAAGATGGATGACCATGGACCATGGAACTTCCCACCTGTTTTGCTTCTCCTCAATTGCCTTTGCACTTTT GCTCTGAACTTATCAGTTTTCCTTGTGATTACACATACAAGTGCTTTAACCATTCGTGTTGCTGGAGTTGTCAAGGATTG GGTGGTTGTCTTACTGTCTGCTGTTCTGTTTGCTGATACAAAGTTAACAACCATCAATTTGTTCGGTTATGGAATTGGTA AGTGTCTGCAATGCAATGTATGGCATTCTAAATTTTCCTGTCTCGTTAGACTCCAGGAAAATGGGTAG
Protein sequence (LotjaGi3g1v0145300.6) extracted from Lotus japonicus Gifu v1.2 Proteins.
MADPKKEGFLTYAYLLLYIALSSGQIFFNKWVLSSKEFNFPYPLGLTLLHMVFSSVVCFILTKVLKVLKVEEGMTPEIYA TSVVPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFLLGVAAGLELMSCKMLLIMSVISFGVLVASYGEININWI GVVYQMGGVVGEALRLIFMEIFVKRKGLKLNPISVMYYVSPCSALCLFLPWIFLEKSKMDDHGPWNFPPVLLLLNCLCTF ALNLSVFLVITHTSALTIRVAGVVKDWVVVLLSAVLFADTKLTTINLFGYGIGKCLQCNVWHSKFSCLVRLQENG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 8 | 8 | - | – | |
| PANTHER | 5 | 293 | 289 | 1.7E-178 | – | |
| PANTHER | 5 | 293 | 289 | 1.7E-178 | – | |
| Phobius | 9 | 28 | 20 | - | – | |
| TMHMM | 9 | 28 | 20 | - | – | |
| Pfam | 14 | 292 | 279 | 1.4E-21 | ||
| Phobius | 29 | 39 | 11 | - | – | |
| Phobius | 40 | 65 | 26 | - | – | |
| TMHMM | 43 | 65 | 23 | - | – | |
| Phobius | 66 | 76 | 11 | - | – | |
| Phobius | 77 | 96 | 20 | - | – | |
| TMHMM | 78 | 97 | 20 | - | – | |
| Phobius | 97 | 101 | 5 | - | – | |
| Phobius | 102 | 129 | 28 | - | – | |
| TMHMM | 107 | 129 | 23 | - | – | |
| Phobius | 130 | 135 | 6 | - | – | |
| TMHMM | 136 | 153 | 18 | - | – | |
| Phobius | 136 | 153 | 18 | - | – | |
| Phobius | 154 | 158 | 5 | - | – | |
| TMHMM | 157 | 179 | 23 | - | – | |
| Phobius | 159 | 183 | 25 | - | – | |
| Phobius | 184 | 194 | 11 | - | – | |
| TMHMM | 192 | 214 | 23 | - | – | |
| Phobius | 195 | 214 | 20 | - | – | |
| Phobius | 215 | 225 | 11 | - | – | |
| Phobius | 226 | 250 | 25 | - | – | |
| TMHMM | 229 | 251 | 23 | - | – | |
| Phobius | 251 | 315 | 65 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0145300.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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