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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0146500 |
| Transcript ID | LotjaGi3g1v0146500.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein SIP5; TAIR: AT1G78420.1 RING/U-box superfamily protein; Swiss-Prot: sp|A5DQJ8|SIP5_PICGU Protein SIP5; TrEMBL-Plants: tr|A0A0S3SK61|A0A0S3SK61_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0146500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:19590610..19599518) extracted from Lotus japonicus Gifu genome v1.2.
CACAGACACAAGATAGCGAGTGAAAGCAGGTAGTCTCTGACATTGGCAATAGGGAGCTTAATGGAATTATTCTTTTCTCT TCCATTACTCCTTCCTTTCCTATGCTTGTGTTCTTCTTACATCCCACACCATCTTTCTCTCTCTAAAACCCCCACTCTCT CTCTCTCTCTTCCTCTGCAACAACGATTTAAGGTTCGTTTCCTAATTCTCACCAATTCAGTTGTTGTTGTCGTTGTTCAT TGTCTTCTTCCTACAAGCTTCCATTTCACTGTTTTTTTTCAACCTCGTAAAACATTGCTTGTTCCGCCACTGAAGTTTTG CACCTCAATTGGTAACTGTTTTTGTTTGTTTTCCCTATTTCGTGTTGCATTTTTCTTAGTTGCTTTGTTTTTATTCCGTT GCGTGTGCTTCTTCAATTGGAGCTCCGTGTGGAGCACCAATTAGGGTTCCTGGTGGTGTTACTGTCACGATTGGCAATTT GAATTGGTTTGTTATGAGTTATATTGCTGCCTGCTACCTAATTGTAACGAATTGTGGAGTTTTATTAATGAAAATTTGGT ACATTGAAATTACAAGCTCATGTTCTGTATTTGGGACTTGTTTGTGTTTTGGCGGTTGAATTTAGGGCCGGGGTGATTTG GAGCAAGTTTGAGGCATTGAGTGATTGTGTTGCAAAGGGTGGAGTTTCGATTATTTTTTGAAAGCTTTCCGTTTAGTTCG GGGTGTTTTTGCTTACATGTCTATTTTTGCTTCATAAAATGCTGCAGGGCTTTCGAGAAGAGTATTTGCGACATTGTCGA TGAATTGACGGCAAAGATTCTGTTTTAGTCTGTTGATTGTATTGTATATGGGAGATTAGGCTGTTCGAATGCTGTTGATT TTGTATGTCACTAATACAGTCTAATTTTATGTCCTGATAGATTTGTGGTATAGGACAGTGACTGCTGAGTGGTTTTTGTA GAGGATGGTTTGTTACTATTGTTGTCGCTGTTGTGTTATTTTACCTTGGTGAAGAATTCAAAACATAGTCATTAGACAAG AAGAACTGAAGTTTGTTGGATGGGTAATAAACTCGGGAGGAGGAGACAAGTGGTAGATGAAAAATTTACAAGGCCGCAAG GGTTGTACAATCATAAAGATGTGGATCATAAGAAGCTGCGGAAGCTAATCCTCGAATCAAAGCTTGCACCTTGCTATCCT GGAGATGAAGAAAGCGCCTATGATCGTGAAGAGTGCCCAATTTGCTTTCTGGTCTGATTTCTATCACATTCACATTTATG AAATATTTGTTTCTTCCCATGTACTCTGTTACAATATGTTTTTGAAAAATGAACAAATGATTCAACTGACAATACTTATT TCAAACTGTAGATTTTATCTGTGGTTTACCTTTATTGGGTTTCACTTATTGACTTTTCTTTGAACCAAACTGATGTAGGA TGTAACTTTAAGTTCTCTTTATTAAACCTTTTGAGCTGCTTTTCATCTTGTTTCCTTTAAGTCTCTTCTACCTATGGCTT TTCTAATCATCCCATTTCATTTTGCTTTATGTTTTTGCCTGAATTTAGTACTATCCAAGTCTAAATCGATCAAGATGTTG CACAAAGAGCATATGTACAGGTAATTATTTGTTTATCTTCACTGGTTACGTTCAATACAGACATTTTTATGCAATCTGAT TAATTCCCTTTTATCAGAGTGCTTTTTGCAGATGAAAGTTCCAAATTCAACTCGGCCTACACAGTATCCTATATTTGTTT GTGTTCAATATGAAGACGTAACTCTTAGTTGTTTGTCAACTTGCATCTTTTTTTGCTTTAATATTGGAATAATTGCTTTC CTTAACAACATTAGATGTCCCTTCTGTAAAACGGCAAATTATGCTGTGGAGTATCGTGGTGTGAAATCTAAAGAAGAGAA GGGATTGGAACAGATTGTAAGCAATATCTGCTACAATTTTTGTCTTTAAAATGTTTTTTTGAATTGAGTTTCACTTGCAT ACTCACCATTATTCAGGAAGAGCAACGTGTTATAGAAGCAAAAATAAGGATGCGGCAGCAGGAACTCCAGGATGAAGAAG AAAGAGTGCACAAAAGACTAGAGATAAGCTCTGCAAGTGCGAATGTGGAAGTTGCAGATGTTGAATACAGTTCAAATGCA GGTAGTCTTTCATCACAAGTTCTGGTTGTTCGTCAATGTGACTATCCTAATTGCATAAATTATTCTTTTGATTCAATTTT CATAGGGGCTACATCTTCAGTTTCTGTTGTTGAACGTGATGAAATTGTTTCTTCTCAAGACTCTTGTGCCACGCCAGTGG TTAGATCTCATGCAGCTGTGAGGACCAATAGGTATGCTAGTCTTCATTCCTTTTCTATTCTGACTCCCTATTTTTTGTAT TGTTTCTTAGTGTTTCTGTGTAAAACGTTGTCTCACTAACTTATGGCATTAAATGTTAAAAAAATTACATTGGGGGAAGT AAATGAGTTGGTATGTCTAATTGTTGTGTGATGATCTAACATTGCCTCATACTTATCATGATTCCTTTGAGTTATGTTTT CCCATGAATATATGACCCTTTTGATTGTACTATCTCCATCATCGTTGAGGTCCTTGATACGAGACCCCTCTCCCACTTAT CCTTTCCTCGTACTTATAAGCAATATGCCTTATACATTAATCCACTAACTAACAATCTACTAGCTAACTAACTCCCATTC TGTTACTATTATATGGGCTATTAACTCACTACCCCAATACTGCAATGTGAGTGTGACTATAAGTTCGCAAGTTCAAGGTG TGGAATTAGCCTCTAGTAAATGCAAGGTATGACTGCCTACAATAGTCCCTCCCAAATAAGTGTATGCCTTCCCTGGACAT TGCTATAACTGGAGCTTTATTGCTCTGGTTGCCCTGTTTTTTAGTGACAGTTCTAATGCAACATCAGAAGTTCTGTCCGA TTTGAAGAGCTCTGCAGATGAATTCATAATTAAACTCGGCAGCTCCAAAATAGCTTAATTTCAAATCCAACAATAACTTA ATTGATTATTTTGTTATGCAAGTTTAATTTCTTCAATGCTTACCCAGTGAAGTGGATGAAGAGGGCAGTTGATGTAGTTA GTTATAATTTGACTACTTGGCTTTGATTCAGTAGCTAATCTTGAGCTGATGCTCCTTGGAGTTTTGATTCTGTGGATGGA TATGGGTAGACATGCAAAAAAGGTTGAGTTGCACAGATGGACAAATGTTACCAGTAACTAGCATTTTGAAAGAAAGGTTC AAGATGCAGACCAATATGTGGCAAATCCGAGATTTATTCTTTTGAATTAGTACTTAATCAACTTGGAATGATGCTTTTGT TTGTGAATACACTTGTGAGTTTGGTAGATTCACCAAATTTATTTATGTAAGAGATTGAAAAAGCTCCTTAAACTTACTTA CATATCCCGGGTACGAAAGAGGAAACAAAGGGTAAAAGATAGATAAAGCCTCTTATTAGTTATTAAATATATTTAATGTT ATACTTGTCAATGTTTTGGATTTATTGCAGCTCATATATGCATAATTTGAATTGAAAAATTAAATGAAGAAGACTAATTA AGAGGTGGAACATTTTATACATTTGTGCTATATTTAAGTTATGCTATCACTATCATTAAACCAGTTTTAAACAGATTTTG TGAGCTACACTATGCTTATGTTATGGTCTGATTTGACGAGTGGATTTTAAAATTTTATTAAAAAAAACTAGGGGGACAAT GTAGACACGTTAGGGGTGTTTATTGATATACTGAAAATAAAAATAATACATGATGTATCTTCTTTTTAAATGGTAAAAAA GTTGATGTGTTCAAATGTTATAGTGTTTTGTAGATAAGTTTTATTGATTTTATCATACCCTGGGTTCAGGTGCATTATAA GCCTTGGGATACCAACTACCTACTGTTACAACTCTGTCAACCCTCACGTTCACTCACTATTTTACCTTTTCCTTTCCCTC ACTGTGTCCTTGTTCATTGAGAACTTCATTTCAATCATTTGCATTTGTAGCACATAGTCGCGTCCAATGTCCTCGAGAGA CCGTCAAATGGTCTATCCTATGCTTTGGTACCATGTCATGAACCAACTATCCAAAAAGTTTAAGATGTTGATTGAAGACA TACGAGTGGTTTTATATTAAATTTCTAACACTCAGCATCATATGCTGAGGTTATTTTTGCCCCCTCCAACTCATTGTCAA ATGGTTGTGATGTGGAATCCCTACTGTTTGCATAAAGAGGCAGTTTCAGTAAAAACAGAATCCTTGTTCATTAGGATTAT TTGAATTGCAAGATGCTTAGTGGAATGGATGTGGCATTATCTATCACGGGTGATGTCACAACAATAAATGGCCAATTCAA GGAATCTAAGACTTGGGTACAATACAATTTTAATTTTCCTAGGGCTCAGATGCGGTATACAATTTCATGTTTCTAATCGA ACAAAAGAGAAAACAGACAGGATATGCTGTGCTTTGGAGCTGAATTTCCTCAAAAAGACTCAGTACTGTGTTAGTTCAAG TTGGGTGTGTATCAGCTTGATTTGAGCCATATGTCTAAAAAAACATTGAGAGAGAGAGAGAGAGCTTCTGTATCATAGGG GTAACTGAGTAAGGTAGTTCCCCCCCCCCCCCCCCCCTTTCAGAATCCATATATTTTTGCTTATGGTAGATCATAAGTAG AATTCATGAGTAAAGAAGTACAATATGCAATAAATTTATGTTGACACTCCAATTCCACATACACTTAAGAGAGAAAGGAA AAAGAGAGAAATGAGAGATATGATGGTTGATGTGATAGGAAAAGGAGAGAGAGATAGGAAGAGTAAGTGAGTGGAAATGG GATGGAAGAGAAAGATGAGTGTGAATGAATCAAAACTCTACAATATGCTTCTGTTTGGTAGTATTTTATACGTATTGGTA TCGAGTGTAGGCTCTGACTGGAACACCTGTTGACATGTGTGGTCCAACAACAGTAAAATCCAAGGAAGCAGGATACTTTA AATTGGTTGTTGTATTGGTTACAGATACTTCTAACCTGCATGGCTGCATCCTCTAGTTTCTTTTTAACGTCTATGTTCTC TTGTATCCTTGTTTTGTAATAGTGCTGCTGCATCTGATACCCGTACCTACTTTGCATCATAGGTGGAGACCTATCTCTAT ATTTGGCTATTTAGGATGGTGTTATTAAGTAGTCAATATTTGTATTTGGTTATGGCCATAAATACATGAGTTCTTTCATA TATATTGCATTTGGAAATGTTTCTTTTTTGACAGACCTTTTTTATTTTCCCCTAATTGTTGAAAAAACTGCAGAGAGGAT GAATTTGACGTTGATCTTGAGGACATTATGGTCATGGAAGCAATCTGGCTTTCCATTCAGGTGAAGACTTTTGTTTTAAT ATGCTTACCTATAAGTTATCAGTGATTGAATTTATCATTAAATTTGATGATTTCCGCTTCCCTGCAAAGTGGTTCACAAC TTGTTTTATAATCTTTTAATGGCATACTATTAATTTCTTGTTTGGTACCTAATTGGTGGTAAATTTTGAAATCATTCAGT TTTAGTTTATTTTGCTCAAGTTGTCAAACCTCATTTTTTAGCGCTTCAGAAAAGCGACTTTGAGATGAAAGAAATATTTT CATATTCAGAATAGCATTTGGACCACCGTTTTTGGGTCTAAATATAAACGATAACTCCTAAATAACTGTGAAGAAAAACC TTTACATTTGTATTTCCTTACTAGGTAGCATCATTCATACTTACATCTACTAATTATGCAATTAAAGAAATTTTCAATAT ATGTACGTGGTGAGGCATATGTGTTGGCTTGTTGAGTTGCTGTGTGACTGTGTCCATTGCATGCCTCATTTGTTAATCAG AATCGGAGATCACTACTCCCCGTCAATATTTCACAACTTGATAAAAAGATATAGAGCCTTTTCATGGATGTGTACCTAAT TTTGATCTTAATTACTCTGTTTTTTAAATTGAATCTCATCATCATAATCATTCAGCAATAAGATACAAATATGAGATACC CACACATCTAGTTTCTATATATAGTGATATGCCTAGCTCAAAGAGGTAACTCATGCTTAATCTATAAGGAAAAATAATAA AATACTTGCGTATTTTTATTTTTTATCCACGACGTTTGAATTCAAATTGCAATCTTTTTGGCTTGCACAAGCACTCTAAA GTCCAAGTTGAAAGCCCATCTTTCATTATAATGTAATTTTGGGTAACCTTTAGATTTCTTGGAAAAACAACCATACTGTG CAATCCAGATTTTTTCTATCTGTTTAAAGGTCGGCTTGTTTCACTGTAAATTCTATATATGGGAGCATATCCACCTGTCA AAACATAATTTAAATTTATAAAGATCTCCATGTTATGAAATTTAACAATGGACATACTGCCATGTACAAGTGTCAGTGAA TGAGTCTATATCAGCCCTACTCTATGGTTTGTGCTGTCCTGTTTCTTTTGATGGTTGTGATTGATTCAAAATATGCCCTA AAACTACAGGAGAATGGCAGGCAGAGAGATTTATCTTTTGCTGATGCTAGTTCTGGCCACTTTGCGGCCAATGATCGCTA TGCTTCATCTGTCACGGTTCCTCAGACAGGATCTTCTTCATCGCCCTCTGGGGGCCTTGCCTGTGCCATTGCAGCTCTTG CTGAGCGTCAGCAAATGGCTGGAGAAACATCTATGAGTTCCACCAATGAAAGTATGCCCTCATTCAATATGCTACAGGGT TCCAGAAGGTTTTACAACAGGCTTGGTAGAGATGTGGTTAGTTATCCACCTACAGACAACCACAATGATGTACCACCCGA TGATGATGGCGCGATGACTAGGGGTCATAGTGAATGGGACATAGACCATGGGCCACAGGTGGTTGAAACAGCAACTAGTT ATGCAAACTCTGTTGCAGCAGAAGATCGCGGTGAACTATCTTTACCACGGTCTGATGACATTGATGGCAGCCTTCAAAAT GCCACTGCCACAGACCCCATTGTTCCTGAGAGTTATGAGGAGCAGATGATGCTAGCTATGGCTGTCTCTTTAGCTGAAGC TCGAGCCATGTCAAGTGGACACAGTGCTTCTTGGCAGTAGTTTTCGGTTGAGGGGCTGGTTTTATCTTCTTAAATAGGTG AAGCTTGCCTTGGCTGTTTGACTAGCCAAGTCCTGAGTTGGGAGTCTGAGCAAAATTCACATGTGTGCAATTTATTCAAA GATCAGGTAGTGATTCTCTTCTTACACGAATTTATATATATAGATGTCAAAGGAAAACATGATTCAAGTTAGTGAAAGGT TGTTGCTTAATGCCATTTTTACTCATGTTTGTGTCCTCTCCCTGCCTCATTGGTTTTATGTAAATAGTTTTAGTCTTTGA TAAATGTCTTTTCATTCTTACAACAATATAAGGCGCATTTTAGACATGTACTGAAAAAGAAAGGAAACTAATTTTCCTTC TCAGTTTAATTCATCTCTGGTTCTATTCATTGAGATCTGAGTATTAAGTTGTGCTTATAGGGCATGGCACTTGAAATATC TGGGAAATTTTGCTGGAATTATCTCATTGAATGACATAGGAAAAACCTTTTGTTTGCGTGTATGTGTGTTTTTCTTTTTT ACAATGTTTATTTGAACTTAAATATGTTTAAAAGATTTGTAACAGGTGTGTAAGTCCCGATAAAAAGCGAAAACAAAGAT GCAATTTTCATTGAGGTTAATGTTAGTGTGTGTGTGTATGGGTGGATTTGGTAGCTTTTTGCACATAGAATACATCAGTA AAGGATTATTTAAGATGAGGATTCTTAATAAAGCCTCTGTTGAGAAGTTCTATATTGGCTAGAGATATGCCCTAATAAGT ATTATATATGGGAAGATGATCCAATTTCTAAGCTAGATTTTGGTGTAGAATTAGGCCTAATCCAATTTCTAAATGCCTCC CCAGCACTTCCTGCATATTGTTCTTTTCATTTGCTTTACACTCAGGTGAATGCAAAGGCAGCTTTATTTCCCATTAGACT AATTTATGGTAGGCTGTAAAACATCCTTGTGATGTAGTTCTTGTGTGAAATTTTTACCCTCAAGATTTGTGACTTTAATT AAATTTGAGACACCTTGTAACAATCATGTTATTTATACAGATGATTCCTCTCATATTTGGAGACTATCCATCCATATGTT TTCTCCTTTCTTTCTGAGTTTTTATCATCATCAATGGTTAGTTATGTTTCATTTTCTGTAAATTTTGTGTTGATCTGTTC TATCTTTTCCCTTCTTGTTATTATCCGTGGGTGACAGTGGTCAGATTTGGCTTGTGTAATTGGCACTGCCAGAGTCCGCA ACAATACGAATGGATTCACTCACATGAAAATTTCACATGTGAAATTTGTGTATTCATCACTTTGTAAATTTTATGAAATC TATGGAAAATGAGATATAAAAGTTATGTTGATAAGATTATATGAAATTTTAAGGGGATTCATTCTCTGCGATTTTGTAAT AGGTGTTGCACAGGAATTTCCTCTTCATTATTTTAAAATTTCCATGGTTCTAGCTTGAATGAGTAGAATTCCTCCACATT TTTTGTGCAATTTTTTGTTTGTTTATACTTTCTAGAGGAGTTTCATTGTTGTTTCGTAAACACTAAACTCAATTTGATAT GAATTCATAATTTCTCATATTGTTCGAAATGAAGTTGAACTCAAAATTCAAAGAGAAGTAAGAAAGTGGAGAGCCAAAAG GAGAGGTAAGCACCACAAATTTTTGTTGAGGGAGTTTGATAAGTTTGATTGATGAGAAGTCACTTATTCATGGAACTAGA TGATCCTCAAGATACAAGTTCATAAAGAG
CDS sequence (LotjaGi3g1v0146500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTAATAAACTCGGGAGGAGGAGACAAGTGGTAGATGAAAAATTTACAAGGCCGCAAGGGTTGTACAATCATAAAGA TGTGGATCATAAGAAGCTGCGGAAGCTAATCCTCGAATCAAAGCTTGCACCTTGCTATCCTGGAGATGAAGAAAGCGCCT ATGATCGTGAAGAGTGCCCAATTTGCTTTCTGTACTATCCAAGTCTAAATCGATCAAGATGTTGCACAAAGAGCATATGT ACAGAGTGCTTTTTGCAGATGAAAGTTCCAAATTCAACTCGGCCTACACAATGTCCCTTCTGTAAAACGGCAAATTATGC TGTGGAGTATCGTGGTGTGAAATCTAAAGAAGAGAAGGGATTGGAACAGATTGAAGAGCAACGTGTTATAGAAGCAAAAA TAAGGATGCGGCAGCAGGAACTCCAGGATGAAGAAGAAAGAGTGCACAAAAGACTAGAGATAAGCTCTGCAAGTGCGAAT GTGGAAGTTGCAGATGTTGAATACAGTTCAAATGCAGGGGCTACATCTTCAGTTTCTGTTGTTGAACGTGATGAAATTGT TTCTTCTCAAGACTCTTGTGCCACGCCAGTGGTTAGATCTCATGCAGCTGTGAGGACCAATAGAGAGGATGAATTTGACG TTGATCTTGAGGACATTATGGTCATGGAAGCAATCTGGCTTTCCATTCAGGAGAATGGCAGGCAGAGAGATTTATCTTTT GCTGATGCTAGTTCTGGCCACTTTGCGGCCAATGATCGCTATGCTTCATCTGTCACGGTTCCTCAGACAGGATCTTCTTC ATCGCCCTCTGGGGGCCTTGCCTGTGCCATTGCAGCTCTTGCTGAGCGTCAGCAAATGGCTGGAGAAACATCTATGAGTT CCACCAATGAAAGTATGCCCTCATTCAATATGCTACAGGGTTCCAGAAGGTTTTACAACAGGCTTGGTAGAGATGTGGTT AGTTATCCACCTACAGACAACCACAATGATGTACCACCCGATGATGATGGCGCGATGACTAGGGGTCATAGTGAATGGGA CATAGACCATGGGCCACAGGTGGTTGAAACAGCAACTAGTTATGCAAACTCTGTTGCAGCAGAAGATCGCGGTGAACTAT CTTTACCACGGTCTGATGACATTGATGGCAGCCTTCAAAATGCCACTGCCACAGACCCCATTGTTCCTGAGAGTTATGAG GAGCAGATGATGCTAGCTATGGCTGTCTCTTTAGCTGAAGCTCGAGCCATGTCAAGTGGACACAGTGCTTCTTGGCAGTA G
Protein sequence (LotjaGi3g1v0146500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGNKLGRRRQVVDEKFTRPQGLYNHKDVDHKKLRKLILESKLAPCYPGDEESAYDREECPICFLYYPSLNRSRCCTKSIC TECFLQMKVPNSTRPTQCPFCKTANYAVEYRGVKSKEEKGLEQIEEQRVIEAKIRMRQQELQDEEERVHKRLEISSASAN VEVADVEYSSNAGATSSVSVVERDEIVSSQDSCATPVVRSHAAVRTNREDEFDVDLEDIMVMEAIWLSIQENGRQRDLSF ADASSGHFAANDRYASSVTVPQTGSSSSPSGGLACAIAALAERQQMAGETSMSSTNESMPSFNMLQGSRRFYNRLGRDVV SYPPTDNHNDVPPDDDGAMTRGHSEWDIDHGPQVVETATSYANSVAAEDRGELSLPRSDDIDGSLQNATATDPIVPESYE EQMMLAMAVSLAEARAMSSGHSASWQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 420 | 420 | 2.1E-125 | ||
| Gene3D | 47 | 140 | 94 | 4.2E-5 | ||
| SUPERFAMILY | 56 | 107 | 52 | 2.47E-5 | – | |
| ProSiteProfiles | 59 | 102 | 44 | 8.786 | ||
| MobiDBLite | 368 | 388 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0146500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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