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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0153100 |
| Transcript ID | LotjaGi3g1v0153100.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; TAIR: AT3G15350.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; Swiss-Prot: sp|Q9FLD7|GT14A_ARATH Beta-glucuronosyltransferase GlcAT14A; TrEMBL-Plants: tr|G7IRB3|G7IRB3_MEDTR Core-2/I-branching enzyme; Found in the gene: LotjaGi3g1v0153100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:20701401..20705559) extracted from Lotus japonicus Gifu genome v1.2.
ATGTGTTAGTCGCAATAATAAAAAATTGTTGTTTAAAACTGGAGGTTAAAAGTTCAATTCATATAAACCGAACTCTTAAC AAAAACATTGCATCTTCACCCCGCGAGTCAATATTGAGAGAGACTGTTATTTTTATTTTTATTTCAGTTGTAAAGCACTA GTAATCGAGAAGTTAGCAGCAACGCCCTCTATATATATGGCACCACTTTGTGTGACACGTACATCAACAAAAGAAACTCC TTTTGCTTACATCTTCCTCTAAATTTTAGTGCTTTATATGTGCTCTGCTTCTTCTCTATTTTCATACGCGTTCTTCATCA CAAAAACAGGTTTGTCTCTCGTGTTTATCTATCTAAGTGTTTCACATCACTCTGATCTAGATTATGATCATTAACTTAAT AGATTCTTAACTCTCACATGCAGGTTCCCTCTCTCTTCAATTTTTTTGTGTGTTTCTGCAGTTTCAATTTCTATGAGACA TTTATTTTTTGATCCGCGTTTGTTTCTGTTTATGATCATATTCTTTTCACGCGTTACAGCACATCTATTGTTGTGTGTTT CTCATAGTATTTCCCAAACAATCGTTATAATTGAAATTACATCCGTTTGGGATAGCTTATTTGAACTTATCTAATAATAT AAGCGTTTGTGCAAATGTTTGACAAAGCTTATGCAAACAACTTATGACCTATTATAAGTTGTTTTGAGCTTATTTTCATA AGCTATATGAAAGCTTATGAAAAAGAATTTATGCTTATATAACTTATTTTCAATTTATTTTAACAAAAAAATTAAAATTG CTTATGAACAAACACTTATATAATAAACGCTTATGAATACATGCTTATGACGCTTATGTTATAAGCACTTATGATCGCAC CTATGACATAAGCGCTTAATTAAGTTGTTTTTCCAAACGAGGCCTTAATTGACCATTGTTTGAGCTTAAACCTATCTTTA TTTTATCCCAATATAACGATTGTTTTTTCTAGATCGTTATTTTTCAAGCTAATACGTGTTTCGTTGCATAATTCGTTTTC TCTGTTACAATTTTTAGTTCTTCAATGCCAAGGGCAAAATCTGTTATTTCTTAATTAATTAATGCTTTTTTTTGTTACAA ATTAATTAATGCTTTAATATTCTTTTCCAAGTTCAGTCGATTTTTTTCATGCTCAAATTTGTCTTGTTTTCCTGTACATA TTTTCTAGTTTTGGCAATTTAATTAAAGGTTTCTTAATTGACCTGTTTGATTAAGAAACCTGAGATTGCTTTGTTTGTGG AACAATTAATCTCACCCCAGAAGAGAACTGCAAATTTCTTGAATTTAATGTTTGATGTGGATTCAACAGATACTGTTCAA ACTTCAAAGGCAGAGATTGTTGATTGAAAAGATATATGAAGAGGATGCCATTTAGATTTATTTAGCAGCTGGTTGGTGGT TATTCATGTTTCAAATGATTCATGAAATCTAGAATGTGAGAATTGTGTAAGTGTATGAGTATCCATGGTAATTCTTAGTG ATGGGGTTCTTAAACATGAAGAAAAAATGGATCTTTCCTATCATCATGACCTCTGCTTTTTGTATTCTCTTTCTAGCCAC ATCCTTGTACATAGGCCTTGTATCTTCAATTCACTCCATCAATTCACTATTCTTCTTTCTCCCATCACATTCACAACCAA ACCAAACTTCCCTCCCATTTGTGGAGAGGAAGATTTCTCCTGCTCTGGCTCCTTCTAAGCCTGCAATTCCGCGTTTTGCG TATTTGATCGCCGGCTCCAAAGGTGATTTGGATAAGCTTTGGAGAACACTTCTCGCGCTTTACCATCCGCTAAACCATTA TGTTGTTCATTTGGACCTTAAATCGCCCTTAGAAGAAAGGTCGGAGCTTGCTTCTAGAGTTGAGAAACAGCCTGTCTTCT CAGAGGTTGGAAATGTTTTTGTAATTACAAAGGCTAATATGGTAACCTATAGAGGACCGACGATGGTTGCTAATACTCTT CATGCTTGTGCCATTCTGCTCAAGAGAAGTAAAGACTGGGACTGGTTTATTAATCTTAGTGCTTCAGACTATCCTCTTGT CACTCAGGATGGTTAGTTTGTTATCTTAGATGGCCATTGATTCTATTAGTATTTTGTTCTGCTACAAATGCTAAGGTTGC AACTTGCAACTATAATTGTTAAACTAATATGGATTATAACTGTGCAGATCTACTATATACTTTTTCGAATTTAGATAGAG GCCTTAACTTCATTGAGCACACGAGTCGGTTAGGATGGAAGCGGTAATTTTTTTCTTCTCTCCTCCCTGAAATGAAAAGC TACATATGAAACCTGAACTTATGCATAATAATGAACTGAACCATACTCTGCAGGGATAAACGAGCAATGCCTTTAATTAT AGACCCTGGGCTTTACATGTCAACCAAGTCTGATGTATTTTGGGTCAATCCTAAGAGAACTTTGCCAACTGCGTTTAAAC TATTCACTGGTTGGTTTCCCCCTTGATCACACACCTCTTTGTCCTTATAATAATTGATTAATTGGTCACTTCCTTATATA TAACTACCTTCTTTTTATTTTTCAGAAGATAATAACATTTTGGTTATGATAGAAGTTATTTGATTCGTTTCATTACCTCC TAGGAGATAGCTTTTTAAGGCACAATTACAATATATGCATGTGTAATTTCAGAAACTTGTGCTCTTACAATCAGTAAAGC ATGCATGGTCTGGTGAAATATTCTCCTTTTGGAACAAGAAAAAACGTTCTTTTACCTTTTGGGCAGAAGAGTGAAGAGCA ATAAATCTCAATCTCAAGCCATAAGTCATAAGTTCATAACAATGCCCCTTGTAGTACACTACACACCAATTGCGAAATGA CTGATTTCTTGCTTGCCATTGTTTTTCCCTTTCTATAGTTATCTACTTTGTTTTCCAAAGTTGTTTCTTATTTTTTTGTT GAATGATTGTTGCTACATTGCAGGTTCAGCATGGATGGTTTTATCGCGTGAATTTGTTGAATATGTTGTCTGGGGTTGGG ATAATCTGCCAAGGACCCTTCTCATGTACTACTCTAATTTCATATCTTCCCCTGAAGGCTACTTTCAGACAGTTGCATGC AATGTGCCAGAATTAGCGAAAACCGTTGTCAACAGCGACATGCATTATATTTCCTGGGACAATCCTCCTAGACAGCACCC TCACGTCCTTAACATCAACTACACTGAAAAAATGATTGCAAGTGGTGCTGCATTTGCCAGAAAATTTAAGCAAGATGACC CAGCCCTGGATTTGATTGATAAAAAATTCCTACACCGGAGAAATGGACTATTCACACTCGGCGGGTGGTGTTCCGGTAAA CCCAAGTGTACCGAGGTTGGGAACATTTATAAACTCAAACCTGGTCCGGGATCTCAGAGGCTTCAGCGCCTTGTAGCTGA GCTAACATTGAAGGCTCAATCTGGTCGTGATCAGTGTAAGTAGATCCTTGGAGATGGAACAGTCACATAGATATAGGTTA TTTTTGTAGCCAAGTGCACTATTTTAGCCCCCAATTGAATGGAAATAACATTTGAAGTTCGAGTGCCCATTCACACTTTA GCTATATTGCCTCTATATCTAATATCAATCAGAGTAATCTTTCTTTTTGAACATAAGAGGTTACACACCATCAAGATCAC GGAAATTTATAGGTTATTGAATCATTGTTGTTACTTCATGTTTGATGGATCATTATCTTTTGGCTTCCTGTGGACAACAG AAATGTGGACCTATAGCTACAGGCTCAATCAGCCAGAAACTGTGCATGTCATTTATTTATCATGATAAAAAAAATTCAGT GGAATTTATTTGTTTTAAATTGCTTAGTTTAATGGCAATGAAAGTTCATGATCAATACAATACAGTAAATCTCAATGCGG TGAAGAGTTCAAGCTTGCTCTGATAAGAGAATAATAAGCTATAAAATAGCTAATAATTACTGTCATACAATTTTTTTCTG CTATATCAAGCCTAATGTAAGATTGTGAGTGAATTTTCAGTACTTTGATCTCTCACGAATGGACATTTATTTTCTTTTTC ATTATAATTGTTTTAGAAAAATTACAATATAAGACATGAGGCTAGATTGTAAGAGGTTTAATGTATGGAAAGTGTTGGG
CDS sequence (LotjaGi3g1v0153100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGTTCTTAAACATGAAGAAAAAATGGATCTTTCCTATCATCATGACCTCTGCTTTTTGTATTCTCTTTCTAGCCAC ATCCTTGTACATAGGCCTTGTATCTTCAATTCACTCCATCAATTCACTATTCTTCTTTCTCCCATCACATTCACAACCAA ACCAAACTTCCCTCCCATTTGTGGAGAGGAAGATTTCTCCTGCTCTGGCTCCTTCTAAGCCTGCAATTCCGCGTTTTGCG TATTTGATCGCCGGCTCCAAAGGTGATTTGGATAAGCTTTGGAGAACACTTCTCGCGCTTTACCATCCGCTAAACCATTA TGTTGTTCATTTGGACCTTAAATCGCCCTTAGAAGAAAGGTCGGAGCTTGCTTCTAGAGTTGAGAAACAGCCTGTCTTCT CAGAGGTTGGAAATGTTTTTGTAATTACAAAGGCTAATATGGTAACCTATAGAGGACCGACGATGGTTGCTAATACTCTT CATGCTTGTGCCATTCTGCTCAAGAGAAGTAAAGACTGGGACTGGTTTATTAATCTTAGTGCTTCAGACTATCCTCTTGT CACTCAGGATGATCTACTATATACTTTTTCGAATTTAGATAGAGGCCTTAACTTCATTGAGCACACGAGTCGGTTAGGAT GGAAGCGGGATAAACGAGCAATGCCTTTAATTATAGACCCTGGGCTTTACATGTCAACCAAGTCTGATGTATTTTGGGTC AATCCTAAGAGAACTTTGCCAACTGCGTTTAAACTATTCACTGGTTCAGCATGGATGGTTTTATCGCGTGAATTTGTTGA ATATGTTGTCTGGGGTTGGGATAATCTGCCAAGGACCCTTCTCATGTACTACTCTAATTTCATATCTTCCCCTGAAGGCT ACTTTCAGACAGTTGCATGCAATGTGCCAGAATTAGCGAAAACCGTTGTCAACAGCGACATGCATTATATTTCCTGGGAC AATCCTCCTAGACAGCACCCTCACGTCCTTAACATCAACTACACTGAAAAAATGATTGCAAGTGGTGCTGCATTTGCCAG AAAATTTAAGCAAGATGACCCAGCCCTGGATTTGATTGATAAAAAATTCCTACACCGGAGAAATGGACTATTCACACTCG GCGGGTGGTGTTCCGGTAAACCCAAGTGTACCGAGGTTGGGAACATTTATAAACTCAAACCTGGTCCGGGATCTCAGAGG CTTCAGCGCCTTGTAGCTGAGCTAACATTGAAGGCTCAATCTGGTCGTGATCAGTGTAAGTAG
Protein sequence (LotjaGi3g1v0153100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGFLNMKKKWIFPIIMTSAFCILFLATSLYIGLVSSIHSINSLFFFLPSHSQPNQTSLPFVERKISPALAPSKPAIPRFA YLIAGSKGDLDKLWRTLLALYHPLNHYVVHLDLKSPLEERSELASRVEKQPVFSEVGNVFVITKANMVTYRGPTMVANTL HACAILLKRSKDWDWFINLSASDYPLVTQDDLLYTFSNLDRGLNFIEHTSRLGWKRDKRAMPLIIDPGLYMSTKSDVFWV NPKRTLPTAFKLFTGSAWMVLSREFVEYVVWGWDNLPRTLLMYYSNFISSPEGYFQTVACNVPELAKTVVNSDMHYISWD NPPRQHPHVLNINYTEKMIASGAAFARKFKQDDPALDLIDKKFLHRRNGLFTLGGWCSGKPKCTEVGNIYKLKPGPGSQR LQRLVAELTLKAQSGRDQCK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 17 | 17 | - | – | |
| Phobius | 1 | 36 | 36 | - | – | |
| PANTHER | 3 | 420 | 418 | 1.5E-222 | – | |
| PANTHER | 3 | 420 | 418 | 1.5E-222 | – | |
| TMHMM | 12 | 34 | 23 | - | – | |
| Phobius | 18 | 29 | 12 | - | – | |
| Phobius | 30 | 36 | 7 | - | – | |
| Phobius | 37 | 420 | 384 | - | – | |
| Pfam | 79 | 338 | 260 | 1.5E-72 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of LotjaGi3g1v0153100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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