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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0153200 |
| Transcript ID | LotjaGi3g1v0153200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Proton pump interactor, putative; TAIR: AT4G27500.1 proton pump interactor 1; Swiss-Prot: sp|O23144|PPI1_ARATH Proton pump-interactor 1; TrEMBL-Plants: tr|V7BWN7|V7BWN7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0153200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:20709540..20715145) extracted from Lotus japonicus Gifu genome v1.2.
AGAAAGAAAATGAAAAAAGCAAAAAAATCTCACAATAACAGTGTCAAAAACGGGAATCTAATGTTTTACCGTTTCGAAGA AATCGAGGTAGCGAAATCCACTCCGGAACCTGATCACATTTGTTTTATAGTATAAATAGGACAATGTAAAAAAACACCAC ACTCTCTCTCTCTCTCAATCTAGTTCTGATTAGTCTTGCACGTGGAGACGCTTGAGGTTCGGGTCTAAGATCTGACCCTT CTCCCTATATTTCGATTCGGATTTTGAGACATCCTTTTTCAAAAGGGGTCTTCTTCTTCTCTGCACTCTCTCCACACACA CTGGTATTCTTCTCTCTGTTATTGCTTGAGCAGTTTTTAGTTTGTTTCTGTTGTTTTTTCAGTTGAATGTTTGTAACTTT TTGTGTAAATCAATGGTTTGGATGATCGTTCAATGTGTTTAGATCATACCCTTTTGGAATTTTGTTTTTCTGTACTAGTT GTTTTCATTTTCTGGGATTTTGATTTGCATGTTGGGTTTGATCATTGAACTGGTTTGACTATCTCCCTAAAAACCCAGAT TTGAAATCTTATATCTGAATTGTGGTGTTGTGTTGTGTGTTGTTGATTTCCTCTGCATGTTTGAGATGGAGATGGTAATA TGTAGATCCCCTTCATCCATTTCACATGCCATGATTGAAGATCGAGTTTCTGTTATCTAATTGAATGAATTCAGTACTCA TCGTTGACTTGACTGAGCTTTGTCCTGCATATGCTCTGTGGCTTTATATATATGTGTGTATTTTGGTTAATTTATAGTTA TATAGACGATTAGTGTTCCGAAATTTTTCTTTTCGATTCATGATTTAGCCTTTGCTTATGCACTCGACTTGATTCGAATC GAAGAGAATTTTTAGAGTATCTGTTTGCTGAGCTTGTGGATGAACTTGTTAAATTATACATGCTCCTAATTGCTGAATCT TTCCCTATATTGATATGATATACATGTGTATTTTTTTCTCTGGAATTAGGTTTTGTGACTTGTTGTTGGAGACATGGCGG TTGAGGTTGTGGGATTTGAGATGGTTCAAGGACCAGGACCATTTGAGAACGGTGCTGAAGGAGGCAAATCTGTTTTGCAT GAAAAGGAGAATGGAAAACTGGACCAAGATGTGGGAGCTGGTAAGCCCATCAAGTTCGGGTCACATGGAGATGAATCTGC TGCTAAAGGGGAAGGGAATGATGTTTCAGATTCCAATGTGCCCAAAGATGTTGGTGAAGAGTGGCCTGCACCTAAGCAGA TTCATTCTTTTTATTTTGTCAGGTGCCGGCCTTATGATGATCCAACCATCAAAACTAAAATTGATCAGTTTGACAAAGAG ATTAGCAAGATAAATCAAGGCCGGTTTCAGATCACTGAAGCTCTGAAGGCAAAGCGGGTGAGTAGAGAATAGTTCATCAT TGTTGCTTGTTGAAGTTTTAATTGTTCTTAGGGGAAATTAAAATGTGAAGAGAATCGAAGGAGTAAAGTAGGATGTGGCA ATGCAGTCAAAGGCCCCAAAATGAGACTGCAGAAGGGTCTGCACCATCTGCTTGTTGTATTCATAACTGTTTAAATCCTT ATTCATAACTGTATTACCCCTAAAAGTCGAGTCATTTAACTTGCTACTGTGATGCTATCATGTTAAGGGAGACAGAATAG AATGTTCCATAACATTTTCAAATTGAACAGTTAAAACTTCGTGTTCACTATAATGTATGATGCTTGAGTTGTTAGTCATA TGGAAAGTTAATGGAAAAGAGGAAATGATTTATTTTCTGATGTTGACTCCTCTTATGTGGATAATTTATACAAAATAGTA AATGTTTTATAATCTAATGTTGACTACTATTTCATGAGGCACACATGTTTTGGTGCCTTATGTTTGGGAGATGGGGTGTA TCAGCTTGATAGCTCTGTGGTTAAATGTGCAAAAAGATGTATATAATGTTATGACATAATTTTAGTATGTTTAATTATCA ATGTTGGGATCTTTTCAAATGTGGAGCTAGCTAACATAGAAATGTAAATATATGGGAATCACCTGATAGTAGATTAATGT GGCTTGCACATTCTGCTCTTTCCTTGAAAGCTTATATTTGTGTAATGATATAATGATCTTCTTCTCTACAGACATCTAAC ACAATTGTATTTTGGTGTTTACTCTTCACTGCAGTCAGATCGTGCAGAGTTGATTTCTCAGATTAAGTCTCTTAGAGATA ACAGTAGGCAATTTCAGAGTATGGTTGATGAGAAAATAAAAGAGATTGAACCTCTACAGCAGGCACTGGGAAAGCTGCGT ACTGCAACTAATGCCGGTCGGGGTGGCTTATGCTCATCTGAGGAGGAACTTAATGATGTTGTATGTTATGAGTCCCAAGT TTTTTCAATTTAGAGTTTGTCAGTTTATCTGTATTATATAGTTAATCCAAACACCTATCCTCCATTCACCCACTTCTCGC ATTGCATATTCTATAATGGATGCAGATATATAGCTTTCAGTACCGCATACAACATGAGAGCATTTCATTGGCTGAGGAAA AACAAATCCTCCGAGATATCAAACAGCTTGAGGGGACAAGGGAGAAAGTTGTTGCTAATGCTGCAATGAGAGCCAAGTTA CAGGACTCTATGGGGCAGAAAGACACAATTCAAGATCAGGTTAAGGTAAGATATTTGTGCTATTGGGGTTTAAAGTGTTT CTTAATTAATTTATTTTTAAATCTGTATTTTTCATCAAGTTGTTGAGAAAAAATATTTCTTGCAGCTTATAGGTGGGGAT TTAGATGGAGTGAAGAAAGAGAGACAAGCAATTCGATCCAAAATCAAGCAAATTGATGAGGAGCTGAAAGCCAATGAAAA GGATATCCAGTCTCTACAGGAAGAACTGACAGCTGTCACACAGAAGAGGGAAAAAGCTTTTGAGAGCATTCAGCAGCTGA GAAAACAGCGCGATGAAGGGGTATGTTTTGCTTTAAATATGAGCACTGTCTAGTGTCTAGTGTCAAGTCTAAGGTAGCTT TTGGTGAACAGGTTAGAACAGGACAAAACATGAATTCTGTTTCATGTTTGATGCATATTAAAAGTATAAAATAACAGGAT TCAAGTTAAAAAATAAGTGATATATTTTGGTTTTACTTAAAAGATGCTGCCAAAGAAAATGACAGGATAGGCCGTCTTAT TTTTGCATTTTCATCTCACTTGGTATGCACAAATTTAAAGATGGAATGCTGTGGTGTTAGATCATTTTCGTCTTTCATTT GTTTTCTTGATTTTACCAGAATGAGGCATTCAATGACTTCCATTCGTTTTTCAAATTCAACTAATTTCATCCATTACCAG AACCCCATTCAATCTTACTATTAGTGAAGTTTATACCTAAATTTTGCTATTTCAGAGATTTAGTTAAAATTGTAATAAGA ATCCTGACTCCTGAGTTCCGCCAAACTGACAAGTGACAATTATTTAACATACCTATTGTCATGAACTGAGTAAAATATAA TTTTGTCCTTCATTGAAACCTGCTTGATCCTGTTTGTGTAGTTTTCATGTAATTTTTGTCATTTCTTTATTCTGTTTTCC TGGGCTTCAGATTATTTCTTAATTCAAATTAACATTTTCTTTTGCAGAACTCCTATTTCTACCAAAGTCGCACACTTATG AATAAAGCACGGGAGCTTGCTGCGAAGAAAGATATTAACGCTATTGACGAACTTTCACAGACAGAGGTTTGTCTACATGA TATTCATTATTTGGAGTTATCCAATATTTAATGTTGGCATTGTCCTTTAACCATGCAATCGTCTTTTCCTACTTTTCCTG ACTGTGATGAAATGTGGCTGAATCTTAACTTTACCCCCATGGTTCTAGGTTGAGAAATTTATGTCACTCTGGAATAGTGA CAAATCTTTTAGGAATGATTATGAGAAGCGAATGTTGCAATCATTGGATATGCGGCAGTTGAGTAGGGATGGACGGATGA GGAACCCAGATGAAAAACCACTGCTGGAAGAACCAAAACCTGCTGAAACTGATGCATTTTCAAAAGCTATCCCAAAGCAG CCAAAGGAGGAGCCTAAGCCTTCTCCCCAAGAAACTTTACCTACTCAGAAAGAATCGAAAAACAAAGTGAGAGATTTGAA AGCCAAACCGGATAAGAAGGATTTAGAGGAAGCTGATGAATATGAATTTGAAGTTCCCCGAAAGGAGACCCCTCCCAAAG AGCCTGAAATCGATCCAGCAAAGCTGAAAGAGATGAAAAGAGAAGAGGAAATTGCAAAAGCGAAGCAGGCCTTGGAAAGG AAGAAGAAGTTAGCAGAGAAAGCGGCAGCCAAAGCAGCTCTCAAAGCACAAAAGGAAGCTGAGAAGAAGCTTAAGGTGAT TTGATTGTTGATGTGATTCTTTTTGGATTTGGATTCTCTCATGTTAGTTTTTGTCATGTATGAGAGAGGATTGCATAAAA CTAATTATGATAAGACCCATTTTTATTTATGTAGGGTACATTAGTTTTACTTGTGCTGTCCTCTCTCATAACACGCCATT GTTATTTGACTTCTTAACATGAGAAGATCCAAATCCTTTATCTCATTTCGTTCATGTATGTATTTCAAATTCTGACATCT GTTTTTAGGACCGCGAGAAGAAGGCAAAGAAGAAAGCTGGAATTGTGGAGGAACCGGCAGATGAAGTCGTCGAGGCTCCA CAGGAAGAAACCATCAATGATAATGTTGAAGCGGCAGCTCCTGTGAAGGAGAAGGTCCCAAAGGAGAGTGTTATCAGGTC CAGGAGTCGAGCGAAAGGCCCAGATTCTCTTCCAAAAGGTATTCTCAAGCGGAAAAGGTCTAACAATTACTGGATATGGA TTGCATCTGCTGCTTTGTTAGTCCTGCTGTTGTCGGTGCTTGGATACATCTATCTTTTCTGAAAAGCTTAGATCTACAAG AAGGAGCTGTAAACCAAATTTTCCTAGTGAGTGGCTAAGTATGTGAGGGTAGGCCAAGTAATTTCTGTTGTATACACCTT TTTGGGAGAATGGACCAAACACGCACTCTGTTATGCTTAGCTCCTGCTTTATGGAGAAGCTGTATACATTAGCTTGACTT TGTACTTTTTGAATTTTCAGATTTCATGAGATGTTTTGAATATGTTTGTTATAGTTAATTGGTAGGAGGAATGGTGCTCT ATGATATACTGAACATCTTTATGTTGAGAGAAAATGTTGGTGGTAGTCTTTGATGATACAGATTAGAGAATAAAATCTCT GCAGGAGGATGAACATGGTCATCATTCATCAAGCTGTCAATTGAATATTAGTGCAAAACTGCAACTACCAATTGGAATGT AATCATTTTATATTGCAAGTTGTTCAAAATAACCATGTTGACCTAATGCAACTATTTTGTTTGAATTTGTTTCTAAAATT AAATCTTTTCCTCTTTTTTAGAGGATGCGCATTTTGTCTGTTAACTTCATTGTGAATGAAATTTTGACATTGCCAAAATG ATTTTTACCTAAGAGGGGATCGAACCCGGGCCAGAAGCCTAGGTGAAATAATTAAGTTTGAGAGAACGAATTTCTATTTT TAAATA
CDS sequence (LotjaGi3g1v0153200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGTTGAGGTTGTGGGATTTGAGATGGTTCAAGGACCAGGACCATTTGAGAACGGTGCTGAAGGAGGCAAATCTGT TTTGCATGAAAAGGAGAATGGAAAACTGGACCAAGATGTGGGAGCTGGTAAGCCCATCAAGTTCGGGTCACATGGAGATG AATCTGCTGCTAAAGGGGAAGGGAATGATGTTTCAGATTCCAATGTGCCCAAAGATGTTGGTGAAGAGTGGCCTGCACCT AAGCAGATTCATTCTTTTTATTTTGTCAGGTGCCGGCCTTATGATGATCCAACCATCAAAACTAAAATTGATCAGTTTGA CAAAGAGATTAGCAAGATAAATCAAGGCCGGTTTCAGATCACTGAAGCTCTGAAGGCAAAGCGGTCAGATCGTGCAGAGT TGATTTCTCAGATTAAGTCTCTTAGAGATAACAGTAGGCAATTTCAGAGTATGGTTGATGAGAAAATAAAAGAGATTGAA CCTCTACAGCAGGCACTGGGAAAGCTGCGTACTGCAACTAATGCCGGTCGGGGTGGCTTATGCTCATCTGAGGAGGAACT TAATGATGTTATATATAGCTTTCAGTACCGCATACAACATGAGAGCATTTCATTGGCTGAGGAAAAACAAATCCTCCGAG ATATCAAACAGCTTGAGGGGACAAGGGAGAAAGTTGTTGCTAATGCTGCAATGAGAGCCAAGTTACAGGACTCTATGGGG CAGAAAGACACAATTCAAGATCAGGTTAAGCTTATAGGTGGGGATTTAGATGGAGTGAAGAAAGAGAGACAAGCAATTCG ATCCAAAATCAAGCAAATTGATGAGGAGCTGAAAGCCAATGAAAAGGATATCCAGTCTCTACAGGAAGAACTGACAGCTG TCACACAGAAGAGGGAAAAAGCTTTTGAGAGCATTCAGCAGCTGAGAAAACAGCGCGATGAAGGGAACTCCTATTTCTAC CAAAGTCGCACACTTATGAATAAAGCACGGGAGCTTGCTGCGAAGAAAGATATTAACGCTATTGACGAACTTTCACAGAC AGAGGTTGAGAAATTTATGTCACTCTGGAATAGTGACAAATCTTTTAGGAATGATTATGAGAAGCGAATGTTGCAATCAT TGGATATGCGGCAGTTGAGTAGGGATGGACGGATGAGGAACCCAGATGAAAAACCACTGCTGGAAGAACCAAAACCTGCT GAAACTGATGCATTTTCAAAAGCTATCCCAAAGCAGCCAAAGGAGGAGCCTAAGCCTTCTCCCCAAGAAACTTTACCTAC TCAGAAAGAATCGAAAAACAAAGTGAGAGATTTGAAAGCCAAACCGGATAAGAAGGATTTAGAGGAAGCTGATGAATATG AATTTGAAGTTCCCCGAAAGGAGACCCCTCCCAAAGAGCCTGAAATCGATCCAGCAAAGCTGAAAGAGATGAAAAGAGAA GAGGAAATTGCAAAAGCGAAGCAGGCCTTGGAAAGGAAGAAGAAGTTAGCAGAGAAAGCGGCAGCCAAAGCAGCTCTCAA AGCACAAAAGGAAGCTGAGAAGAAGCTTAAGGACCGCGAGAAGAAGGCAAAGAAGAAAGCTGGAATTGTGGAGGAACCGG CAGATGAAGTCGTCGAGGCTCCACAGGAAGAAACCATCAATGATAATGTTGAAGCGGCAGCTCCTGTGAAGGAGAAGGTC CCAAAGGAGAGTGTTATCAGGTCCAGGAGTCGAGCGAAAGGCCCAGATTCTCTTCCAAAAGGTATTCTCAAGCGGAAAAG GTCTAACAATTACTGGATATGGATTGCATCTGCTGCTTTGTTAGTCCTGCTGTTGTCGGTGCTTGGATACATCTATCTTT TCTGA
Protein sequence (LotjaGi3g1v0153200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAVEVVGFEMVQGPGPFENGAEGGKSVLHEKENGKLDQDVGAGKPIKFGSHGDESAAKGEGNDVSDSNVPKDVGEEWPAP KQIHSFYFVRCRPYDDPTIKTKIDQFDKEISKINQGRFQITEALKAKRSDRAELISQIKSLRDNSRQFQSMVDEKIKEIE PLQQALGKLRTATNAGRGGLCSSEEELNDVIYSFQYRIQHESISLAEEKQILRDIKQLEGTREKVVANAAMRAKLQDSMG QKDTIQDQVKLIGGDLDGVKKERQAIRSKIKQIDEELKANEKDIQSLQEELTAVTQKREKAFESIQQLRKQRDEGNSYFY QSRTLMNKARELAAKKDINAIDELSQTEVEKFMSLWNSDKSFRNDYEKRMLQSLDMRQLSRDGRMRNPDEKPLLEEPKPA ETDAFSKAIPKQPKEEPKPSPQETLPTQKESKNKVRDLKAKPDKKDLEEADEYEFEVPRKETPPKEPEIDPAKLKEMKRE EEIAKAKQALERKKKLAEKAAAKAALKAQKEAEKKLKDREKKAKKKAGIVEEPADEVVEAPQEETINDNVEAAAPVKEKV PKESVIRSRSRAKGPDSLPKGILKRKRSNNYWIWIASAALLVLLLSVLGYIYLF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 590 | 590 | - | – | |
| PANTHER | 6 | 613 | 608 | 1.3E-263 | ||
| PANTHER | 6 | 613 | 608 | 1.3E-263 | – | |
| MobiDBLite | 11 | 76 | 66 | - | – | |
| MobiDBLite | 24 | 38 | 15 | - | – | |
| Coils | 124 | 144 | 21 | - | – | |
| Coils | 256 | 311 | 56 | - | – | |
| MobiDBLite | 373 | 480 | 108 | - | – | |
| MobiDBLite | 373 | 418 | 46 | - | – | |
| MobiDBLite | 429 | 480 | 52 | - | – | |
| Coils | 479 | 526 | 48 | - | – | |
| MobiDBLite | 551 | 580 | 30 | - | – | |
| MobiDBLite | 555 | 580 | 26 | - | – | |
| TMHMM | 591 | 613 | 23 | - | – | |
| Phobius | 591 | 613 | 23 | - | – | |
| Phobius | 614 | 614 | 1 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Endoplasmic reticulum | The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached). | ||
| Cellular component | Plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. | ||
| Biological process | Regulation of proton transport | Any process that modulates the frequency, rate or extent of proton transport into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. |
Expression pattern of LotjaGi3g1v0153200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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