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LotjaGi3g1v0156500.1

Overview

Field Value
Gene ID LotjaGi3g1v0156500
Transcript ID LotjaGi3g1v0156500.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Protein phosphatase 2C-like protein; TAIR: AT3G15260.1 Protein phosphatase 2C family protein; Swiss-Prot: sp|Q9LDA7|P2C39_ARATH Probable protein phosphatase 2C 39; TrEMBL-Plants: tr|I3SBX1|I3SBX1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0156500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:21388649..21394678) extracted from Lotus japonicus Gifu genome v1.2.

CTCTTAAACAATGAACATAACTTTAAACAACAAAATATGATGAAAGGAGGGAAGGAAGTAGCTTTTTGTAGTTATCAAAG AAACAAGTTGAGTGGACTTGTCCCTTTCATCTTTCAAAGTCTTCGGACACCACAATTTTCTACTTTCATTAGTTGAGCAC GGTCATCCATCTTTCTCTTCTTCGTTCCCTTGTTTCCTTAATCTATTTTCCTCAATTCAAGTTACTCAGCTAAGCTATGG CAGCCAGAGATATCCTTCTTAAGATGAAGGTATGGGTCATTCACTCATTCCCCTTTTGATACTTTACAGTAGTAATTAAT GGTTGGATCTCATTTTCCTTGCTTAATCTTCATTATCACTATAGAAATGTTGTAGATCTTCATTTCTTGGTATTGATCAT CATATGCTAAATTTAATAAACCCACAAGTTTTCTTGTCTATTTTTTTTTTGTCAGTGTGAGGGGCTGCACTTCCATAGTT GACTTTGACTACTACCACACAGTCTTTCCCTTTACTTTTCTGCATTCTATAGCTACAATTTTTACACTAAATCGGATCTG TAGGTAAACGATATATCACTAAAACAGATTATGCATATACCTTTGTTTCTGGATGAGAGAAATATACCACATAATCATAA GAAATAATAATTTGATAACTTAGTGAAGGGACTGAGGGTGGGAAATTTACTGGTCATTGGTAAGGAAGAACATTTCATTT TACATCTTGCCAATAATCATAAGAATTAAATGCACCTCCTTTACCATGAACATGGGACTATGGGGAGTTCAATCACTGGT ACAACACCTAATTGTTATTAAACCAAACTTGTGAAAGAGAATAAATAGCAAAAGGTAATTATATTATTTATGACGGTCGG CTTGCTTTAAGTATCCTCTGTGCCAGTTGTTAATTCCAGCTAACTGCAATATTGATCAATCAGTTCATAGGGAAATTGTA CTTGATCATACTTGAACTAAGCAGGAGCATATTGTTTTTTACCTTCATATACTTGAAGTCTCACATATGATAAGTTAGGT TTCAGAGAGTACAATGATACTGATGAAATAGGAAATGATACTTATTACGAGTAGCTATTGAGGAGAGAAAAGAATGAAAG TAATTAGTTAAATGGAGGTTTGAGGGAGAGTAAGGTGATTCAGCTTGGTTATATAAGTTGTGTGTACATGTGGAGAAAAA GATTATAACCTCCACCAGAAAATAAAATTTTGCAGTTGTCTGTCAAAGTCAAAACATTTATCCACCCCGGAATCCCATTG GTTTGTACCCAAGAGCTCTCTTATTTTCTAACTTGACATGGGAAGAAAAGATTTAGTATCGTCTCCCCTTATTAATTGTG TGAGACTCTAATACAGTTGATAGGCATGATAGTATTTTCATTTGCTCATTTTCTTGCCTTATGATGTTGTAATTGCGATT TTTTGCTGAATATTTAAGTTATTTTTCAGACATTCGTTTGACATGAGCATGGTACTTGCAGGAAAAAGTTGGGTTGAGTT CTTCAGCCCCTGATTCAGGGAAAGGAAAGAGCAAGTTGTCGAAGCACGTAACTCACGGTTTTCACCTGGTAAAGGGGAGA TCATATCATGAGATGGAGGACTTTGTTGTTGCTGAGTTTAAGCAAGTTGAAAGCAATGAGTTGGGTTTGTTTGCAATATT TGACGGCCATGCGGGTCACAATGTACCTAACTACCTCCGGTCTCATTTGTTTGATAATATCTTAAAAGAGGTAACACATG GTCCTTGCCTTGTATTTGTTACGTTTTACTTTTTAATATATCCACTGCTTTCTATGAATCATGAACTGCATTTGAATTAA GGCTGATCTGCATGCAGACTTGAAAAAAATCATGATGTCAATTCAAGTTGAATGAATATGATTACTATATGTAATGCAAG TTCAATCATCCTTTTTTTCCCCATGTAGCCTGACTTCTGGAAAGAACCTGCAAAGGCTATCAGGACAGCATATAGTATAA CTGATTCTACTATTTTAGAGAAATCAGGTGAATTGGGTAGAGGGGGTTCAACTGCAGTTACGGCAGTATTGATCAATTGT CAGAAGTTAGTAGTAGCCAATGTTGGCGATTCTCGGGCTGTCTTGTGCAAGAAAGGCGTGGCAAAACAGCTATCAGTGGA TCATGAGCCAAGCACAGAACATGAGGATATAAAAAATAGAGGTGGTTTTGTATCCAAATTTCCAGGTGAGACATGGTTTC TAATGTATATAGTTTTTTTGCCTTGACCTTATTAAATGTTGTAAAAGGTTGCAGTTATGGGGATTTTTAGCTCAGTGAGC TTGTGATTCTCAATGCTTTATTTAACTGGTATAAAAATAGTTTAATTAGAACAGGACATACTTTGAACAAGTTTGGAGCA CTTATTGGAGCTTATAGGTGTTTTTTTCTAGTAGATAAGCTCCAATAAACTCTTATCCAAACACGCTTTGTTCCAGTGCT AAGGATACAACTTACGTGATCAATTCAGGGGACGTTCCGCGGGTTGATGGAAGGTTGGCGGTATCAAGGGCATTTGGGGA CAAAAGCTTGAAGAAACACTTGAGTTCAGATCCAGATGTGACAACGGAGCTGATAAATGATGATGCAGAGTTTGTTATAT TAGCCAGTGATGGATTATGGAAGGTTAGTTTTCATAATTGAAGCACGATGAAATCCACTTATGGATAAGTTTCTCAATGC AAAAAGATTCAGGTTGGGTGCAGGAAAGGTTATTCTAGTTTTCAAATCTGTTTATGCAAATTATTATTCCAGGTAATGTC AAATCAAGAAGCAGTTGATTCTATCAAAGACATAAAGGATGCTCGGTTATCCGCAAAGCGTCTTACTGAAGAAGCAGTTA ACAGGAAAAGCAAAGATGATATCTCCTGCATTGTTGTGAAGTTTCAATGATCACAAGACTCACATTGCAGACTTTGATCA ATAAATTTGCAAGTGTAAAATATAATTAAGTGTAACGATAAAGCTTGATAGCTATCAGGTGGTGTCATTATGCTGAGTCC GACGTACGAAATTACGAAGCAACTGAAAGGACTCACTATTTGAAGTAACAATGTGGAAAAGATGTATGTAGTTTCTGAGT GTAGAACAATCTGAAGTCTCAATTTGCAATTTTATTTTGTTTTCCATTTTTCCGCATACATGATATGTATGTTGGAAATT TATGTGTATTTCAGAAAATCAGCTCCCACATTGCCTATGGAGAATTTATTTTTATTTAAAGCAGAATTTTATCATTGATC TTGAAGCGAAAGCCTCAAGCAAAGAGAAACAAACAAGACACAAAAACCAAAACAAAAAACAACCAAACAAACCAACAAAA AGGAAAAAAAAAAACTCTAAAATGATGATTAATTTGTAATATGAATAGTCATAGTCAGTTACATTTTATTTAGGTCTCTT TATGCATTTCTTAGTGTTACTTACAAGCATAATAATGTTAGAGGATAATGTCTTTTATGAAGAAGCATAACTTGTATAAT TTTCTCTTCTCTATTCACTAGTATTAATAGAGAAGCTGGTAAGCTATGTTGAAAAAAAATATGAAGTAATAAAAAGCTCA GATTGCAAAAATAGATTATTCCCTAAATTTTGTTCTACTAAGCTTCTGCTGCTCGAACAAATTTGGTATCTGAGCTCCAA TTCAATAACCTGGCATCATCATCAAATTTTGTTTTCTCATAAATGGTGAACACTATGTTACTGGAATTCACAAATGGAGA CCATCTTCCTTTCACAAGATCTATAGGATGTGGTTGAAGAAGAGTATGAAGAGCGCCCAAAACAAAAAAAACAACATAGT GGGCTGATGTCAAAGAGAAAGAATACAAGGAGAATGTGAAGAAAAATGCTACAACATTGAGAATTATCGAGCAAGGAGTA AGCGAAACCATTTATCCCACAATCTTTGGTATAAAAAAAGCTAAAGAGTCATGCGAAACATTGAAGATTGAATTTCAAGG ATCAGCAAAGGTGTGTGCTATCAAGTTTCGGTACTTGTGGAGTGAATTTGACAATCTCACAATGAAAGAAGGTGAGCAAG TCAAAGATTATTTCTCAATGGTGGCTGAAAAAATCACTCAAAATAAAAGTTGTGGAGATGATGTATCTGAAAAGAAAGTG GTTAAGAAGATCCTCCGGAGTCTTCCTAAAAAATTTGAACACATTGTTGTTGTTATTGAAGAAACAAAAGATCTATCAAA GCTCACTCCTTATAAACTTATGAGGTCTTTAGAAGCTCATGAATAAAGAGTGAACCAATATAACAACCAGTCATCAGAGC AGGTTTTTCAAGCAAAATAGAACTTTAAAAATTCCAAATCACAACAAGGAGAAAGAGGGGATCAAAACTGTGGACAACCG AAACTGGAGACGAGAGAAAAACATGAATTGCATTTTGAAGACAAACCATTTATTTATTTATTCATTGCAAACTTCTTAAT TCATTTTAAACAAATGCTCTTCTCCACTTGGAGAACAAAGACAAACCACAAATTTATTGCAATCTAAAACCAATATTAAG AAATGGTTTCAAATTATCCCAAGGACAGAGGCTCAAATTATTTCTGATTAGGCACCTTGATATAGCCTACATGGGTGGAA TTCGCCACTCTAGTAAGGGTTTGTAGATCATACGCTGCCCAACACCTTGAGTTATCCTTGTTGTAGAAATACCCCACACA CTTGCAGTCTTTGGTGCATTTGTTTCCACAATTAGTTTCACTTACTCTATCCCCAGTAGTGTATTTACTCATGTAATGCT CAACTCCTTCAAGTTTGTAGTAGTGGAATTCACTTGCCTTGCATGATGTTACAGCCTTAGCACTGCAATTGTTACTCCAC CCAAATAGTCCATTCTCCAATGGGCAAGCAACACATTGATTTTCCTCACAAAGCCCAAATTTCCCACATCTCTGTGGCAA TTGGCACTCACTCTCATCAGAATCTCTATCAAACAAAGTGTAGGTCACTTTCCAAACACCATCACGCACATCTAGGAAAT AAGTGTTGAACTTAATGTTACCATCAATTCCAAGCCTAAGATATGTCAAGGTACTGTTGTTGACTGGCCTACCAAGGATC CTGTTGCCAAAATTGGAAGAGTTGGCAACAAAGTAATCAAACCCAATTTCAAAACTTTCTGAGTCAGATGTGAATGTGAC ATTTTCCAATGAGCCTTTTTCAACATAAGATTCAGACCAATAGCGAATGGGCTTGGGAGCGTTCTTGGGCTTGTAGTACA AGCCCAGCCCTTTACTCTCCAACACCAAGCTATAAGGTCCATTCACATTTTCCTTCTCGGAAAGCCTGCTAACGAGCTCA CGTGGCCCACCAGCTCTCAGATACTGCCCCACCAGGATCGTATCGGTGGGGTGGTCAAAACTTTGCCAGACGAATTTCCC GTTTGCATCAAGTAACACCATGTTGCCATTTGGAAGTAACCTGAACGCCACCACGCCCTTATTGGCGGTGTTTGTTTGCC ACGCGATTCTGCCGTCAGCGTCGGCAAGCACGAGGTTACCGTCGGTTCCAAGCGAGAAGGTGGCGTTTTCTTTAACTGGG TTGCCTCTGTTGGCCTCCCAGACCCACCGGAAGAGCGACTCCGAGCGTTGGAGGCCCACACGCAGAGCGAGAGTGAAGGA GTTTGGGGTGGTGTTGTAGAAACCAACTTGGAATGGAGAGGTGAAGATGCTTATCATTCGGTAGTCAGCTCCATACTCAA CAATGTAAGGGCCTAGTTCACCAGAGTTTTCGAATTTGAAGGTTTCGTTTTGAGGAACAACAGCATGAGCTAAGAAGGTA AAGAATGAGAAGAAGAGGAATAAAGTGATGAGAAGGGAGGTTTTTCCTATGGGATGAGGCAGAGAAGAAGCCATTGTAGT TGTGAGTGTGTCTGCTATGTTTTCGGTATCTCTATTTAAGCTGTACATCTCGAGGAGTTAAACAATATTCCAATGATTTT TTAATGAAGGTTGGTATGTTCGAGATAGTA
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0156500.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCAGCCAGAGATATCCTTCTTAAGATGAAGGAAAAAGTTGGGTTGAGTTCTTCAGCCCCTGATTCAGGGAAAGGAAA GAGCAAGTTGTCGAAGCACGTAACTCACGGTTTTCACCTGGTAAAGGGGAGATCATATCATGAGATGGAGGACTTTGTTG TTGCTGAGTTTAAGCAAGTTGAAAGCAATGAGTTGGGTTTGTTTGCAATATTTGACGGCCATGCGGGTCACAATGTACCT AACTACCTCCGGTCTCATTTGTTTGATAATATCTTAAAAGAGCCTGACTTCTGGAAAGAACCTGCAAAGGCTATCAGGAC AGCATATAGTATAACTGATTCTACTATTTTAGAGAAATCAGGTGAATTGGGTAGAGGGGGTTCAACTGCAGTTACGGCAG TATTGATCAATTGTCAGAAGTTAGTAGTAGCCAATGTTGGCGATTCTCGGGCTGTCTTGTGCAAGAAAGGCGTGGCAAAA CAGCTATCAGTGGATCATGAGCCAAGCACAGAACATGAGGATATAAAAAATAGAGGTGGTTTTGTATCCAAATTTCCAGG GGACGTTCCGCGGGTTGATGGAAGGTTGGCGGTATCAAGGGCATTTGGGGACAAAAGCTTGAAGAAACACTTGAGTTCAG ATCCAGATGTGACAACGGAGCTGATAAATGATGATGCAGAGTTTGTTATATTAGCCAGTGATGGATTATGGAAGGTAATG TCAAATCAAGAAGCAGTTGATTCTATCAAAGACATAAAGGATGCTCGGTTATCCGCAAAGCGTCTTACTGAAGAAGCAGT TAACAGGAAAAGCAAAGATGATATCTCCTGCATTGTTGTGAAGTTTCAATGA
Download CDS Sequence

Protein sequence (LotjaGi3g1v0156500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MAARDILLKMKEKVGLSSSAPDSGKGKSKLSKHVTHGFHLVKGRSYHEMEDFVVAEFKQVESNELGLFAIFDGHAGHNVP NYLRSHLFDNILKEPDFWKEPAKAIRTAYSITDSTILEKSGELGRGGSTAVTAVLINCQKLVVANVGDSRAVLCKKGVAK QLSVDHEPSTEHEDIKNRGGFVSKFPGDVPRVDGRLAVSRAFGDKSLKKHLSSDPDVTTELINDDAEFVILASDGLWKVM SNQEAVDSIKDIKDARLSAKRLTEEAVNRKSKDDISCIVVKFQ
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR13832:SF682
1 283 283 2.2E-162 –
PANTHER
PTHR13832
1 283 283 2.2E-162
IPR015655
Gene3D
G3DSA:3.60.40.10
31 283 253 2.6E-75
IPR036457
SUPERFAMILY
SSF81606
32 282 251 8.37E-68
IPR036457
SMART
SM00332
33 280 248 1.6E-78
IPR001932
ProSiteProfiles
PS51746
35 282 248 46.368
IPR001932
CDD
cd00143
42 282 241 3.93057E-86
IPR001932
Pfam
PF00481
47 275 229 6.8E-55
IPR001932
SMART
SM00331
48 282 235 0.0049
IPR001932
ProSitePatterns
PS01032
67 75 9 -
IPR000222

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0004722
Molecular function Protein serine/threonine phosphatase activity Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate.
Subterm of
GO:0006470
Biological process Protein dephosphorylation The process of removing one or more phosphoric residues from a protein.
Subterm of
GO:0043169
Molecular function Cation binding Interacting selectively and non-covalently with cations, charged atoms or groups of atoms with a net positive charge.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0156500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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