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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0157800 |
| Transcript ID | LotjaGi3g1v0157800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | transcription factor-like protein; TAIR: AT3G14880.2 transcription factor-like protein; Swiss-Prot: sp|Q84JC2|DOGL4_ARATH Protein DOG1-like 4; TrEMBL-Plants: tr|Q2HSA7|Q2HSA7_MEDTR Transcription factor TGA5-like protein; Found in the gene: LotjaGi3g1v0157800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:21566276..21574691) extracted from Lotus japonicus Gifu genome v1.2.
GGAGTCTAAGTGTTGGCACCTGGGAGAACAGACAAAGGACGAGTCAATTGTATACACGATAGCAGACAACTCGAAACGTG AGCGTTACACGTAAGCTAAGTTTTCCACGCGGCGGCTTTCACCTCTAAACTCACCCTCCTCAGCCTCCACCTCCACCATC ATCACTACCATATCACAACACAACCCCCTTTGCATTTCTTTAATTTTCACTCTCACCTTGCAGCTAGCAATGACCACTAC TACCACAACTTCACTCCCCTTCTCCCAATTCTACGACTTATGGTTCGACCACCTCAACCGCCTTGTCCAGCAGCTGGCCA CCACTACTACCACCGATGGGCCGGACAAGGACCACCTCCTCAACCTCATCAACAAGGTGATGTCCCACTATGAAGACTTG TACCGGGCTAAGTCGGTGGCGGCGGAGAAGGACCCACTCCATGTTCTGACGTGTCCCTGGGCTACTACTCTCGAACGCTC GCTTCATTGGATCACTGGTTGGCGCCCCACCACCGCTTTCCACCTCATCTACACTGAATCTTCCCTCCTTTTTGAGTCTC ACATCATCGACATCCTCCGCGGCCTCCACACCGGCGACCTCCGTGATCTCTCCCCCGTTCAGTTCCGCCGAGTCAGCGAG TTGCAATGTGACACAGTCAGTACACTAACCTTCTTTAGTGTCCCTTATACAGTTTATTACTAATATTTATTCTTAACAGA TTTTAATTAATTCTACATTTTTTGTATAAACAAATGTTAGTTGCTAATTGCTACTCAATCCATCCGTTCCAAAACTATTG CAGTTTTGATTTTTTCACAGAGTTTAAGAACTCATCATTAGGTAAATATTTTGACTCAAATGCCCTTATTTATCTTTGTG TACATCCTTTATACTTGCATAATTTTCCACAAAGAACATCCTCAAATTACTCAACACATTTAACAAAAGCATTTAACGTA TTCATTTGTTCCATACACCCTCGCAAACAAAAGTGACTCTTCATACTCCAGCTTTTGTTTTTCCATTAAATGGTTCAACG TAAAAACCATACACCCTCCGATCACATATATAAGCAAAAAACACTTTTTAGGTTCATTCATTTAATGTTTAACGACTAGA TACATTCATTAAATGAATGAACCTAAAAAGTGTTTTTTGCTTATATATATATATGTGACCGGATGGTGTATTGTTTTTCC AATACTCATTTGACAATACTCCAGCTTTTGTTTTTCCCGCTGAATTGCTAGAGTTAACTCTTGGTTTTCCTTTATGTCTA TTTACGTCTGGTCCTTGAAAACATAAGAGGTGATGGCTCAATTAATTAGACGGTGGAACACTAAGAAATTGGTTCAATAA AGTAGGTGGTAATTATCATGGGATATTATTGTGGAGTATTTATTTAATAAAGGGTATAAAGGGAAGAAAGCATGTTAAAG TGCTTTGGATATGTAAAATAACAATAGTTTTGGAACAAAGAAAAAAAGTTAAAACTACAATAGTTTTGGAACGGAAGAGA AGAAACACACATATTAAGGAGTGCAATTAATTTTGTTGGTTTTCATAAAAATAGTATTAGTTTTTCATTTTTACCCTTTA GATTGCATTTTATCTTTCTTCATTTATTGTTCTGATAAGGGTATTAGTTGTAAAAACATCATTTAATGCTCTCTTGAAAT GCTAAATGAACAGTTAAATAGGAACAAATTATTTTTCTCAAAGTAGACAGATAAATAGGAACGGAGGGAGTAGTTCATTC GCCAGAGTTTGTAATTAATTTTACATGCCTAACCTAACCTCTGTGAAAAAAGTGGTTACTTTGAGAGTTCAATTTCAAGC ACCCACACTCAAAAGTAGATTTTGTTTTTGTTTTTATTACATCGGGTTAGAATTATGAGAGTAAATTAGTAAACAAGAAA ATGTTTATACTTTATTGTTTTATATATATTTTGACCATGTGTTTGCATTGATTAAGATTTCCTGGTTCAAAACTATTTTG TCTCAGTTTAAACGAGTTTCCTATATCTTTGATTTTCAAGCGTGTATATATATGAAGTTTGCCTCCCTAGCTAGCAGGTA CATTTTTGTTTTCCTATAGCTAACTCCTAGCTACTACATTACATTACATGGTTACCTATCGTATTTATGACAATTCTGAT CTCTCATCCCCCTTCTAACTCCCATGACAATTTCCCCATGATTAAGCAAACATTTTGGCAAATAGATGAAACAAAATATT TAGCGGACATACCAATTTCACCTCCACCTTGTGAGATAGATTAGGTAAAAATGAGAGCGAAATGAATGATATGATTTGTG ATGTGACATGAAATCTAGAGAGAAATAGGAAGAAAAATATGTGAAAATGAGATGCAAAAGAAAGTAAGGTGTATATATAT CATATTGAGAAAGATGAAATTGTATTGAGTAAAAGTGAAAAATGAAAAACGTGTTTACATCACTCTCTCATCAGAGATTA AATACTAAGATAAGCTAGAGTAACAAACTAACAAACTCTGTAATTAACTACCAAACTTACTAACTGCCTCTAACCAATTG TAACTAATTCAGTTACTCTAATAACAAACTAAGCTAAGTGTTAACATCAATACTACTATCCTGTATTACCCCCTGCAAGC TGGACTATGTATATTAAGCAGTCCTAGCTTGGTTACAAATGATGGAAACAAGGTAGGAGGTAGTGGTTTCGTGAAAATGT CGGCCAGCTGATTGTGAGTTGAAATTGGCCGGAGATGAACAAGACCAGCCAGCAATTTGTCACGAACAACATGACAATCT AGCTCGATGTGCTTCGTCCGCTCGTGAAAGGTTGGATTTTGGGCAATATGAATGGCAGATTGGTTGTCGCAGAATAAGGA AACTGGTAGAGGGACATCGAGCTGGAGGAACCGGAATAAATAAGTGAGCCACTGAATCTCACATACAGTAGCAGCAAGCG CGCGGTACTCTGCCTCAAAGGAAGAGCGCGACACAGTCGTTTGTTTCTTTGTTCTCCACGAAATGAGGGAAGAACCAAGA AAGATGGAATATCCAGTAACGGAGCGGCGAGTGTCGGGGCAACCAGCCCAGTCAGAATCACTGTAGGCTTGAAGCTTCAA GGAAGATGTAGCAGAGAAAAAGAGACCCTGTCCCGGTGCAGCCTTCACATAACGAAGAACTCGTTGAGCTGCCTGCTAGT GGAGATCAATAGGAGAAGCAAGATATTGGCTCAATTGTTGAACATCATAGTTCAAATCAGGCCTCGTGGTGGTGAGATAG AGAAGTCTGCCAACCAAGCGACGATAACCAGTGGCATCAGCGAGCGGAGTGCCCTCATGCTGAGAAAGATGAAGATTAGA ATCCATTGGAGTTTTGGCAGCTTTACAACCAAGTAACCCAGCATCAGTGAGGAGCTCCAAAGCATACTTGCGCTGTGTAA GACAAATTCCTTTGGCTGAACGAGCGACCTCTAATCCCAGGAAAAATTTGAGATCACCCAAGTCTTTTATGCGAAATTGT TGATGAAGAAAAGACTTAACAACTTGGATTTCAGCCAAGCTATTGCCAGTGAGAAGAACATCATCAACATACAAAAGCAA GGTAGTGAATGATGTTTCAGTCCGCTTGAGGAGCAAAGTGTGGTCATGAGGACATTGTTGATACCCGAGAGACTTAAGAG CAGCGACCAATGTGTTATACCACTACCTGCTCGCTTGCTTCAGTCCATAAAGGTACTTTTGCAAATGGCATACTTGATTA GGTTGGGAAGAAGATACGCTAGGAGGTAATTGCATGTATATTTCTTCATCGAGAGAGCCATGGAGAAAAGCATTATCAAC ATCAAGCTGGTGAAGAAACCAATGCTGAGAAGCTGCAAGGGCAAGAAGCAACCTTAGTGTAGTCATTTTAGCAACCGGAG AGAAGGTGTCAATATAATCCAATCCTTCAATTTGAGTGTAGCCTTTGGCTACAAGTCTTGCTTTGTAGCGGTCAATGGTA CCATCTTATTTGTGCTTGATCTGATATACCCATTTGCAGCCAATTGGCTTCTTGGAAGGGGGCAGGTCAACAATCTTCCA AGTGTTGTTACGGTTGAGAGCAGCTAATTCTTGGTCCATGGCCTGCTGCCATTCCTTGTGTTTAGCAGCCTGAGCATATG TCTTGGGCTCAACTATGGATGAAATGTTAGTGGTAAAAGCAAAATGGGTAGGAGACAAAGAGGTATAAGAGACAACTGAA GATAAAGGGTAAGTGATACCTGAGGATTCAGCCCGAGAAGAAGAATGTGTTGCAGCTATGGAAGGTGGAACAGTCAATTG ATAGTCACTGAGATGGTGAGGCACACGACGAGAACGAGTGGAATGCCTCAAAACAGGTGGAGCAAGTTCTCAGGAAATTG TGTTGTAGGTGAAGGAGGGGTCACCAGTGGAAGAAGGGAAAAATCAATGTCTTTAGTACCCATAGAGGTAGGCAAAGATG GTGATGTAGAAGAGGTATCAAGGTTATGAGAAATTGACTGAAAAGGAAATTCTAATTCATGAAATACAACATGCCTTGAC AACAGAACCTCCCTAGTCTTAAGATCAAACAACAAATAACCTTTTGTGCCATGTTTGTAACCAAGAAAGACACAACGTCG TGCTCTTGGATCAAGTTTTGTACGATTTCTCAAAAGTGTAGAAGCATAACATAGGGAACCAAAGGTCTTGAGAAAACTGA AATCAAGGGTTTTATTATGCAACAATTCATATGGGGTTTTGTTACCAAGTATAGGTGTTGGTAACCTATTGATAAGAAAG GTAGCATGAGCTACAGCATGGGACCAGAAAACCTTAGGCAAATTAGCTTTCAAAAGTAGTGATCTGGTAACATTAAGTAA ATGTTGGTGTTTTCTCTCAACAACAGAATTTTGTTGAGGAGTTTCAACACAAACTCGTTGGTGCAAAATTCCTTTGGAAG AGTAAAATTTGGTAAGGAAAAATTCTGGTCCATTATCATACCTGATCACTTTCACAGTACTACCAAATTGGTTTTCAATC ATGGCACAAAATTGAGGTATAGTTGTTGAACATCAGACTTATTGGAAAGCAAAAATAACCATGTAAAGCGAGAATAATCA TCAACTATAGTAAGGAAAAACCGATGACCATGCATTGAAGAAACAAAGGATGGACCCCAAATGTCAACATGAATCAATTC AAACACTTTATTGGACCTAGTGTCACTAACAGGAAAAGATAATTTCCTTTGCTTTGCAAGGTGACAAATATCACAAATGT GATCCTTATTACATGTAATGAAAGGGAATTGTTTACCCAAAAGACTAAGCCTATCAAAAGAAGGGTGTCCTAAACGATAG TGCCATAAACTTGGAGTGGTTGTTGCTGAGAAACAAGTTGGGTTACAAGATAGTAGAGACCATCCACTTCCTTAGCCGCA CCAATCATCCTCAAGGCACTAAGCAAAATTTTGGAAGAAAAGTAAGCTTACAGCCAAGGGTGTTCACAAGTTTAGTGACT GATATCAAATTGAAATGAAAAGCTGGAAGATAAAGAGCATCAACCAGATAAAAGGAATCTGTAAATGCAATGGTACCAGA AAAATGTGTAAGAGAATTGCCATTAGGCAAATTCACAAGGACATGTTTAATTCTTTTGTAAGAAACAAAAACTGCTAAAC TACAGCAAATATGATCTGTAGCTCCAGTATCTATAATCCATTGAATAGGTTTGAGTTTACCATTCTTGGTTGGAACCTTG ACAGTGTTGTGCTGAGCAACAACAGCGGTATTGGTTGTGGGAGCGAAATTGACCTTGGCAGTGCGTTGTGGCTCTTGATC CTGTGCAGGTAACAGAGATAGCAAGGTGTTGTATTGTGCTTCTGTAAGACTGAATCTAGAATGATCTCCATGATCAGAAC AAGTGTCTTCATCTTCAGTGTTCTGCCCAGAATCTGCACCCATAGTCATATTAGCATGCTTCTGTGGACCCTGGGATTTG CCATTGCCATTCTTGGACTTGAAATTTTGTGGATATCCATGCTTCTTGTAGCATACATCCACAGTGTGACCTGATCGTCC ATAGTAGGAACAAATTCTGCGAGGTTGATTGCGATAGCCACTGGAATGAGAACTAGCCTCACCACGAGAAGAGTGATTGT TGCTACTGCCAGAAGAACTTTCAGAACTGTAGTTGCTGAATTTGCCTCCAGTATTGTGATGCTTCTGAGAATCTGATGCT CCATTTGTACTTGCCATGAGATCCTTAGGAACATGCTCTACTGCAAACTGCCTTTCTTGTTGTGCCGCCAATTGAAAGAC ACGATTGATACTTGGCAGAGGATCCATAAGCATGATTTGTGACCTAACTCCAAAGAATTGCTCACTCAAGCCACGAAGAA AACGAATCACATAATCGGAATTTCGATCCTCTTTGATCTTGACCAAAGCATCACAAGTGCAAGAAGGTAAAGGTTTCAGA ACATCTAATTCATCAATCAGAATTTTCATAGCAGTAAAATACTTTGTTACCAATAAATCTCCTTGCTTAAGACTGTAGAT TTCTTCTTGGAGCTCCGAAATCCGGAAGAGATCTGCTTGTGAGAACTGTTCCTTCAATTCCTTCCAAACATCAATAGCCT TTTCACGCCACAAGATTGATTGAGCAATCTCAGCGTTCATCGAGCGAATGAGCCAGCCAAGAACCATAGTGTTGCAGCGC TGCCAGGAATGATAAATTGCATGATCTTCCGCTGGTTCAGGAAGAGAACCATCCACAAAACCAAGCTTGTTCTTGGTCAA CAAGCTCGTCTTCATCGATCTGGACCAACTATGATAATTGTTATCTGACAATGGTGGAGAAACGAGAATCATCGGCGGAT TCTCATTAGGATGAACATACAGAGGGCAAGAAGTGACTTGCACATCTTCAAGAGAATACGGGTAAGGTGCTGCCATGGCG AAGAAACAAGATCAATCGCAGAAGAAAAAACCGTGCAGATCAAACCAGAAACGAGATCTGAAGCAAGAAAGAGGGATCGA AGATGAATCGACCACTGAATCGAAGACGGAATCTGAGGCAGAACCAACAAATTGAAGATGAATCGATCGAGAGAAACGAA GATCGAAGATGAATCGTAGTTGAATTTCTGTGAAGAAACAGAATTTCTATGAAGAAACAGAATGAATCAGAGTTACGCAG CAGAGCTCTCTTAGAGAGAGAGCGAGCTCTGATACCATATTGAGAAAGATGAAATTGTATTGAGTAAAAGTGAAAAATGA AAAACGTGTTTGCATCACTCTCTCATCAGAGATTAAATACTGTTAGAAGTCTCACATTGGCTAGAGATAGAGCATAGATA GCTTTTATAAGGGTTGTGCAAACCTCAACTCTTGAGCTAGCTTTTGTGGTTGAGTATAGACCTCCCAATTTCTAATAAAT ACTAAGCTAAGCTAGAGTAACAAACTAACAAACTTTGTAACTAACTACCAAACTTACTAACTGACTCTAACCAATTGTAA CTAATTCAGTTACTCTAATAACAAACTAAGCTAAGTGTTAACATCAGTACTACTATCCTGTATTATATCACTCGTTTTTG ATACATTAACTTTCATATCTTGGAACTGAAAATATGAAAGTATATAAGTTAACGTATCCATAATTTTTTGTCAATAAAAA AGGTAAAGGAAGAAAATGCAATAACGGAGGAGCTGTCAGAATGGCAAGACAGTGCGAACGAGATCATGGCTCAATGTACG GATATCAATGAGAAGATCGGACGGCTAGTGAGCATCATAAAAAAAGCTGATGATCTACGGCTGAGGACGTTGAGGAGCGT AGTGGGGTTGCTGTCGCCGCAGCAGGCTATTGAGTTCCTAATTGCCTCGGCAGAGATGCTCGTTGGAATCCGCGGTTGGG GATTAAATCATGACCGTACACGTCGCAGGTAGTGATGGAATTGAATTTCTCTCCACATATTGTTTGAAACTTCATAAAGA AACTAGTATAGGAGCTGGTGGTGACCTCCAAATGATTGAGAATGTCAATTACTACTATTGTTAATGTTATCGCTCATTGA TCTACTAAGAATTAAGTTACACTACATGCCCCTAAAGTATCAATAGACTCCTTTTGATTCATAAATTTTGGTAGCGTTAT TCTAAATAGATAGCAGTAAATAGATTGAAGCAGGATGAAACCTGACACACTAGTTTTATAATTTTATTTTCGTTTAATTG CATTTTTGTCCTTAGTTTTATGATTGAAGGATTTTAGTCCCCCTGCTATTTTATCACAATATTAGTCCTCCTATTTTCTA AATTTTACAATTTTGATTCCACCGTTATTTGGACTTAAATATGGGTTTGGAGCTTGCTCTTTAGTTTATTTGGACAATTG GTTAGAAGACATTTCG
CDS sequence (LotjaGi3g1v0157800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACCACTACTACCACAACTTCACTCCCCTTCTCCCAATTCTACGACTTATGGTTCGACCACCTCAACCGCCTTGTCCA GCAGCTGGCCACCACTACTACCACCGATGGGCCGGACAAGGACCACCTCCTCAACCTCATCAACAAGGTGATGTCCCACT ATGAAGACTTGTACCGGGCTAAGTCGGTGGCGGCGGAGAAGGACCCACTCCATGTTCTGACGTGTCCCTGGGCTACTACT CTCGAACGCTCGCTTCATTGGATCACTGGTTGGCGCCCCACCACCGCTTTCCACCTCATCTACACTGAATCTTCCCTCCT TTTTGAGTCTCACATCATCGACATCCTCCGCGGCCTCCACACCGGCGACCTCCGTGATCTCTCCCCCGTTCAGTTCCGCC GAGTCAGCGAGTTGCAATGTGACACAGTAAAGGAAGAAAATGCAATAACGGAGGAGCTGTCAGAATGGCAAGACAGTGCG AACGAGATCATGGCTCAATGTACGGATATCAATGAGAAGATCGGACGGCTAGTGAGCATCATAAAAAAAGCTGATGATCT ACGGCTGAGGACGTTGAGGAGCGTAGTGGGGTTGCTGTCGCCGCAGCAGGCTATTGAGTTCCTAATTGCCTCGGCAGAGA TGCTCGTTGGAATCCGCGGTTGGGGATTAAATCATGACCGTACACGTCGCAGGTAG
Protein sequence (LotjaGi3g1v0157800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTTTTTTSLPFSQFYDLWFDHLNRLVQQLATTTTTDGPDKDHLLNLINKVMSHYEDLYRAKSVAAEKDPLHVLTCPWATT LERSLHWITGWRPTTAFHLIYTESSLLFESHIIDILRGLHTGDLRDLSPVQFRRVSELQCDTVKEENAITEELSEWQDSA NEIMAQCTDINEKIGRLVSIIKKADDLRLRTLRSVVGLLSPQQAIEFLIASAEMLVGIRGWGLNHDRTRRR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 8 | 230 | 223 | 1.8E-107 | – | |
| PANTHER | 8 | 230 | 223 | 1.8E-107 | – | |
| ProSiteProfiles | 8 | 228 | 221 | 28.887 | ||
| Pfam | 25 | 102 | 78 | 9.8E-26 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Transcription, DNA-templated | The cellular synthesis of RNA on a template of DNA. | ||
| Molecular function | Sequence-specific DNA binding | Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding. |
Expression pattern of LotjaGi3g1v0157800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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