Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi3g1v0166500 |
Transcript ID | LotjaGi3g1v0166500.1 |
Related isoforms 4 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Phosphatidylinositol N-acetylglucosaminyltransferase; TAIR: AT3G45100.1 UDP-Glycosyltransferase superfamily protein; Swiss-Prot: sp|Q94BX4|PIGA_ARATH Phosphatidylinositol N-acetylglucosaminyltransferase subunit A; TrEMBL-Plants: tr|K7N1Q9|K7N1Q9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0166500 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:22716992..22722189) extracted from Lotus japonicus Gifu genome v1.2.
CATCGGAAAGATAAACCGCACTCTCAAAAGATTGATCACCGGATAGTCATCACCCAACACATATGTCCTTAAACTCTCAC TTAAGTTGTCATTTGGGGACAATGTACTTTGACTAAAATAAAACAAAATTCCAAGGCACTCCAACGTTGTCGTTTTGACA TGAAGTAAAAATTTGGGGAAACGCATCTTCTCTCTCCCAGCACCACCGTGTGAGCCCCATCGCCTTCACCGCGAGCTACT TCACGCCTCCGGGAACCTACGGCGTCGTTTACAAGGCCCGTGACCGCGTCACCAACGAGACCACCGTGTTGAATGATCTC TGTCTGTCTTGTTGTTTTTCAATTATTCTGCAGCTACCTGAGTGAGGGGACAATAATGGGTGATCCCCAAAAGCATAGAA TTTTAATGGTGTCTGATTTTTTCTACCCCAACTTCGGTGGTGTGGAGAATCACATTTATTATCTCTCACAGTGCTTGCTC AAGTTAGGCCACAAGGTCAGCCAAAAGTTGTAATTTTTGTGATTCTCTTGAATATTTTTTTACATATCTCTGGCAATGCT TCCATTTCATAATAGCATTTGGGTTTAAGTTATTCATGAGGGTATTTTGTGTAGATTACTAGATTTTCATTTTAGATGGG AAAAAGGGGAAAACATCTTAATTAAGCGCGATTATGGCATAAGCGTTTTCATAATCTATTTAAAAATATTTATTGAAATA AATTGAAAATAAGCTATATATAAGCATAAGTACTTTTTCAAAAGCTATTCTGAGTAACTTATGAAAATAAGCTCAAAACA GCATAAGCTCTCCCAAACACTGGAATAAGAGCTTATACTGTCAGATAAGCTCAAATAAACTCTTCCAAACGGGGTTAATT AGTAAGTGGAAGTTATAGGTGAGGAGAGTAATATACTTATACTCTTTGTTTCTTACTTATATTGAGGTTGTTTTGATGAT GGGAATTCAATGGGAATGACTATTCAGGTGGTGGTTGCAACTCATGCTTATGGAAATCGATCTGGGGTCAGATATATGAC AGGAGGTCTCAAAGTATATTATGTTCCGTGGAGGCCGTTTGTTATGCAGAATACATTTCCAACCATCTATGGTTTACTGC CAATTATAAGAACTATTCTTATTCGAGAAAGGATTACTGTGGTGCACGGGCATCAAGCCTTTTCGACGTTTTGTCATGAA GCTCTGATGCATGCGAGAACCATGGGATACAAGGTTGTGTTTACAGATCACTCGCTGTATGGTTTTTCTGATGGCGGAAG CATCCACATGAACAAGGTGTTGCAGTTTACTCTGGCAGATGTGAGTCAAGCCATATGTGTTTCCCATACAAGCAAGGAAA ACACGGTGTTGCGGTCGGGTTTGCCCCCTGAGAAGGTTTTCATGGTGCCTAATGCTGTGGACACTGCCATGTTCAAGCCT GCAGTGGATCGTCCTAGCAGATCGGAAGTTATTATTGTTGTTATCAGTCGATTGGTTTATCGGAAGGGAGTAGATTTGCT TGTTGAAGTCATTCCAGAAGTATGTCGATTACATCCCAATGTGAGTTGATGAGACCATTGTTTGTCTTGCATAACTAGGA AATTTGGATCTTGAGTTCTGTCTGACATGGAGGTATTAAGAGACTTTGGAAATGATTTTGGCTTTTTATAATTGTTCTCA AAGTTGCAAATTGTTGTTTGGTGATTTATACGCTTGTTCTGATGCTCTTTACACGTTATATATGCTTCTGAGAGAAAAAA ACTAAGGGCTGCTTTCCAAAGCTGGAGCTGGCTTTCAAATATCTGCAATATCTAAAGAGCTTAAACCTTTTCTTCAACTC TAATTTCATTCTTTCCTAATTTTGTGCTATCTATTAAATAACCTTTTTTGTAATTTTAGATACTTACAAAAGTTTACTAG GAACTTTACCATCACTTATTTGATGGCACTTCAGAGAAGCTCTCATAAAAAAATCACACTAAATAAATAAATAAGTACAC AAATGACCTTCTGCTCCAGCTTATGAAAAGCCACAGCATTCCCTAATGAGTTCTTTCCACATTGCTTTCTGGTGATAATT GGAGAATTACCTGAACAAACTTGATGAAATAGTACATGGTTTTGTTTCATGTGGAAGGCTATGTCATGATGACCTTCTAG AAAACTGATGAGGATCTTACAAATTTGGTCCTACTTTCATGATGTTGAAATTACAAGGGCACACAACAATTTTGCTAAAA GAATAGTTTTGGTCATTTTGTGATTTGTTGTTTGTTATCTATGGCTTTTTGTCAGTTAACTTGAACATACACGAGAGATT ATCTCATTTCAAAGTTTTTGCTTAAACCCTTTGTATGTTAGGTGCATCTTATTTAAACTTTTAACAAAATGCTGTAGGGT GAGCTTTATGAAAATAATGCATATTTTGTGATCTTTTTGGTTAACCTTAATGTCATATTGCTGAACTTAATCTTAATTTG AAATCCTCAAGTTAGTATATGTCAGCACTTTGGTGTAAATTCTATATCTGTTGACAGATGGCACTGTCATTGTTATTACT TGTATAGATATTCTTTTACAAGAGCCCCATTACATAGTGCATCTATAGGAATATGCAGTGTGACAGGAATGAATTGCAAT TAGATTGTTTAAACTGTGCACTTTCAAAGGCTTAACTAAGTTACATATCATTTGAAGGTTCGTTTCATCATTGGAGGTGA TGGACCTAAGCGTGTGCGGTTGGAAGAGATGAGAGAAAAACATTCTCTTCAAGATCGAGTTGATATGCTGGGAGCTGTAC CACATGCACAAGTTCGATCGGTACTAATATCTGGGCATATCTTCTTAAATAGGTTCAGCTTCATTAATAAATTTCTCCTT GTGTTCAGCTTTGCGAATTGCAATGATGACTTTCTACCTGTTTGGATGCAAACCAAAGAGGACTTATTGGAGCTTATTTA GTGCATTTTCTAGTAGATAAGCTCCAATAGGCCTGTATCCAAACGGACTCTTTTTATAATTCAAGCTTCTAATTCTGGAA GTTGAGTAGTTCTAGAAGCTTAAGTTTCTTCTATTTTGAGATTTTGGGGCTCTCAATGTCAACACCAATTATGATGCCTG TTGTTTGCACTGTTTCAGTTCGTTGACAGAAGCTTTTTGTATAGCCATATTAGAGGCTGCTAGTTGTGGATTGTTAACAG TAAGCACACGTGTTGGAGGAGTTCCTGAGGTATGTGCAACAGATTTTTTTTCCATACCTATTCAGTCCAAGAAAAAAAAA TCTTTTAATATAGTTTGTCTGAGATTTTTATTTATGAAATTTTGTTCCTTTCCATTTCAACAATTCTGGAACGCTGTCGT TAGAGGCCTTGATGTAGATTCATTTCTTTGCTACATAGGTTTTGCCAGATGACATGATTGTTTTGGCAGAACCTGATCCC AGTGACATGGTGCATGCAGTTCAAAAGGCTATATCTATGCTGCCAAATATTGATCCTCAAGTCATGCACAATCGAGTGAG TTTGTTGTTCAAATGGTCTTTTTCTGTTGCATTCATTGGAGAAACTAGCTCCATTTTTGTTTATGTATTGTCTGCAGGTG ACAGAGCTCTACAACTGGAATGATGTTGCCAAAAGGACGGAAATTGTGTATGACCGTGCTTTGAAGTGCACCACTCAAAA TCTACTAGAACGTCTCTCACGGTACACTCTAAAAAATAAGAGCTTAATTTGATTGTAATGCTGACATATAGTTATTATTG TAATGAAAAACCCACTGTTCACTCAGTTTTAGCTATGTGATTTTGTTAATTTCTTGAGGATTACATTTTTTAATCTGCTA GTAACATAAGCTTGTTGTTGGTACTTGGTTGGGATTTTTATTTGATAGCACCAGTCATGGCAATTCTTTTTTATGGAGAT AGGAGTTCGTATGTAAAATTGAAACATAATTTAGAAGAAGGAACATGAATTTATTGGAGTATTATGATAGGTACCCGCAT GTTTGAAATTGGTTAGCAATTGTCTTAGTTAGTTAAGGGGGTTAGTAGTTTAGTCAGTTGAGAGGGATGAGTATTATAAA TAAGGTTAGTGAGAGTCTGATGTATCCTTGGGTATATCATTTGGGATTGGGGTTTAGGGAGAGGAGCTCTCTTGTATTTC CCTCTAGTTCCCTAGGATTCTATCATTGAATAAAATCAGGATTCTAACATATTATTTGTGAATTTTCCTCTTTACTCAAA GGTTGATGTCAGTTTAATATTCAGAGCATACTTCCTGTATTGATTAACTGAGATAATTTTACGAGTGCTGATTTTCTCGG CTATTTCAGATACCTCCATTGTGGACCATGGGCAGGCAAGCTGTTTTTCTTGGTTATGCTTGTTGGGTTTTTGTTATGGA AGCTATTGGAACTATGGCAGGTAGGCCAGTGGTCTATGGTGTGTGTGACATTTTCATCATAATTATGTTTTGGTAACCTG AATCGCTTGTGTATTTCTATTATTAGCCTGCAGATGATATTGAGATGGTGCCGGATTTTGCTCTTCCACGCGACTCTGAT GAGGAGAGGTTGGGAAAAAATCCAATAAAATGAATGTGGTGATAAATTATTTTGGTGCACTATGGGGTTTTCATTTTGCG CACTAATCGGAAATGCAGAAAGCAGAAGTGTGTTTCAGGAACTGCATTCCATCCCAGTTCCCGGATCTTGTAATGGAGAT AATCAGCAGTCCTATGCATGATCAGAAGTGTGCTTCGTGTGCCATGTTGGCGAGTCATGTGCTTTTGAATCTTAGGCGAC CCCACCCCTTTTTGGTGGGTTATGTTTGTATGGATCATTTTGCACCAAGGTCCATATCTATGTTTAGGGTTAGACTCCTA TAAAAGGGAAGATGAACTATTGTATTATCTATGTTCACTTGCATAATAAATAGGTGACTTAGCCCTAAAAACTATTACTT CCAATAGGGTTTTTGCTTAGTCTCACTAGATTGTGAACAAGTCAATTCTTCAAAACTGAAATTGTTAGATGTCTCGTTAA AATAATGAGAAGATTGCTAATATACAACCAAGAATACTCCACCCCGTGCACAAAAGAATAGTTTTTTATGTGGCGTTGAT CGCCATTTTGGTCTTGCACATAGGAAACAAAGAAAATGAAGAGTAGAACCAAAAATTGAGAGGAGGTTTGTGTTTTGA
CDS sequence (LotjaGi3g1v0166500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTGATCCCCAAAAGCATAGAATTTTAATGGTGTCTGATTTTTTCTACCCCAACTTCGGTGGTGTGGAGAATCACAT TTATTATCTCTCACAGTGCTTGCTCAAGTTAGGCCACAAGGTGGTGGTTGCAACTCATGCTTATGGAAATCGATCTGGGG TCAGATATATGACAGGAGGTCTCAAAGTATATTATGTTCCGTGGAGGCCGTTTGTTATGCAGAATACATTTCCAACCATC TATGGTTTACTGCCAATTATAAGAACTATTCTTATTCGAGAAAGGATTACTGTGGTGCACGGGCATCAAGCCTTTTCGAC GTTTTGTCATGAAGCTCTGATGCATGCGAGAACCATGGGATACAAGGTTGTGTTTACAGATCACTCGCTGTATGGTTTTT CTGATGGCGGAAGCATCCACATGAACAAGGTGTTGCAGTTTACTCTGGCAGATGTGAGTCAAGCCATATGTGTTTCCCAT ACAAGCAAGGAAAACACGGTGTTGCGGTCGGGTTTGCCCCCTGAGAAGGTTTTCATGGTGCCTAATGCTGTGGACACTGC CATGTTCAAGCCTGCAGTGGATCGTCCTAGCAGATCGGAAGTTATTATTGTTGTTATCAGTCGATTGGTTTATCGGAAGG GAGTAGATTTGCTTGTTGAAGTCATTCCAGAAGTATGTCGATTACATCCCAATGTTCGTTTCATCATTGGAGGTGATGGA CCTAAGCGTGTGCGGTTGGAAGAGATGAGAGAAAAACATTCTCTTCAAGATCGAGTTGATATGCTGGGAGCTGTACCACA TGCACAAGTTCGATCGGTACTAATATCTGGGCATATCTTCTTAAATAGTTCGTTGACAGAAGCTTTTTGTATAGCCATAT TAGAGGCTGCTAGTTGTGGATTGTTAACAGTAAGCACACGTGTTGGAGGAGTTCCTGAGGTTTTGCCAGATGACATGATT GTTTTGGCAGAACCTGATCCCAGTGACATGGTGCATGCAGTTCAAAAGGCTATATCTATGCTGCCAAATATTGATCCTCA AGTCATGCACAATCGAGTGACAGAGCTCTACAACTGGAATGATGTTGCCAAAAGGACGGAAATTGTGTATGACCGTGCTT TGAAGTGCACCACTCAAAATCTACTAGAACGTCTCTCACGATACCTCCATTGTGGACCATGGGCAGGCAAGCTGTTTTTC TTGGTTATGCTTGTTGGGTTTTTGTTATGGAAGCTATTGGAACTATGGCAGCCTGCAGATGATATTGAGATGGTGCCGGA TTTTGCTCTTCCACGCGACTCTGATGAGGAGAGGTTGGGAAAAAATCCAATAAAATGA
Protein sequence (LotjaGi3g1v0166500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGDPQKHRILMVSDFFYPNFGGVENHIYYLSQCLLKLGHKVVVATHAYGNRSGVRYMTGGLKVYYVPWRPFVMQNTFPTI YGLLPIIRTILIRERITVVHGHQAFSTFCHEALMHARTMGYKVVFTDHSLYGFSDGGSIHMNKVLQFTLADVSQAICVSH TSKENTVLRSGLPPEKVFMVPNAVDTAMFKPAVDRPSRSEVIIVVISRLVYRKGVDLLVEVIPEVCRLHPNVRFIIGGDG PKRVRLEEMREKHSLQDRVDMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMI VLAEPDPSDMVHAVQKAISMLPNIDPQVMHNRVTELYNWNDVAKRTEIVYDRALKCTTQNLLERLSRYLHCGPWAGKLFF LVMLVGFLLWKLLELWQPADDIEMVPDFALPRDSDEERLGKNPIK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Phobius | 1 | 393 | 393 | - | – | |
PANTHER | 5 | 436 | 432 | 4.6E-232 | – | |
CDD | 8 | 403 | 396 | 0.0 | – | |
SUPERFAMILY | 8 | 374 | 367 | 2.7E-88 | – | |
Gene3D | 11 | 370 | 360 | 2.2E-71 | – | |
Pfam | 46 | 135 | 90 | 3.2E-42 | ||
Gene3D | 184 | 354 | 171 | 2.2E-71 | – | |
Pfam | 200 | 339 | 140 | 1.8E-27 | ||
Phobius | 394 | 413 | 20 | - | – | |
Phobius | 414 | 445 | 32 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Biological process | GPI anchor biosynthetic process | The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol group is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate group, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage. |
Expression pattern of LotjaGi3g1v0166500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…