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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0169100 |
| Transcript ID | LotjaGi3g1v0169100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein SMG8; TAIR: AT1G01550.1 BPS1-like protein (DUF793); Swiss-Prot: sp|A1A4J7|SMG8_BOVIN Protein SMG8; TrEMBL-Plants: tr|K7M344|K7M344_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0169100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:23070247..23078251) extracted from Lotus japonicus Gifu genome v1.2.
CATGATGGGATTATTAGGCATTAAGCAAGTGCTTCTCTTACCTTGGTTTAGGAAAATTGGGTTGAACCGTTTAGACCAAA GTGGAACTCTGAAGTCCACAGTTACAAATTAGGGAAGAAATAGCACAGTCCAAGTGCAATCTGAGAGAGTGAAGAAATGC GATGAAGCCAAATCCCGCAAAACAACGCTTTTGATTTCATTCTGCTGATGGAGGCTCGAAACCCTTCTTCTCCCTCTCCG GTTCGAGTCCTCATCCGCCCTCCACCACCGTCCTCCTCCTCCTCCTCCGATCATCCCTCGGCGGCGCTCCCTCTCTCCTC CTCCGACGGCGGCGTCGTAGTTGTCGGTTTCATCGCTCGACGAAGCGACGACTCTGCTCACCTCCTCAACCGAGTCATCG ACTCCAACGTGTTCGCCTCCGGCAACCTCGACAAGCCCTTACTCTTCGACGATGAGGAAGCTACGGACTGGTTCAACCGC AGGAGAATCAGCTACTTCCGCGACCACGATAAGGGCATCCTGTTCCTCCACTTCTCGTCCTCTCTCTGCTCCTCCTCCCC GGAGCCCTCACCGGGATTCGACTCCGCCGTCGAGGAGCAGGAGTTCGGTGACCTCCAGGGAATGCTCTTCATGTTCTCTG TAAGTCGTTTTTCTTCATTGTTCTAACCATCTTATGCTAAATATTCAGATAAGGTTCTCATAATGTTTCTGTTTATTGAT CGATAATGGAAGAGTTAGAGTAGGATTTATATTATGAACAACAAATTAGGATTAGGAACTTCAATTTTACTGTTTTGTGT AGTTTCTTGATGTAGCTTGATGCGTTTTGTGTGTGATTTTGTTATCATAAACTGTGCATGATTGGTGTAATTGACAACTT AGAAATGCAGGTTTGCCATGTAATCATATATGTTCAGGAGGGGTCGCGGTTTGATACCAGGGTTTTAAGGAATTTTCGTG TGCTGCAAGCGGCCAAGCATGCGATGGCTCCGTTTGCGAAGTCTCAAACTATGCCGCCATTGCCGTCTAGATCGCATTCT TCGTTGTCCTCCAGGCCTACCTCGTCGGCGAATAACTCTTCTCCAGGTAGAGGAGGCGGTGGTAACGTGAGTCGCAATGG GTCAGCCATGTCTCTCATGTCAGGTTTAGGTTCTTATGCTTCTTTGTTTCCAGGACAGTGCATTCCTGTCACATTATTTG TGTTTGTCGATGACTTCTCCAATTTATCAAATTCCAGCACTAATGGGGAGGAGTCTTCAGATGTTTCTTCACTTAGTCAG TCTAATAGTATGAGTAGTGCAGCCAAGGCGAACTTGCCTGCTAAAGTTTCTGGTTCAGTAGTTATGCTGGCACGCCCTGC AAGTCGTTCTGAAGGCGGATTTAGGAAGAAGCTACAGGCATCTCTTGAAGCGCAAATTCGCTTTCTGATTAAGAAATGTC GTACATTATCTGGTTCTGAAATTACTCATTCTGGTGTGAGGACTGGGGGCACCTCAACTTCTGCACCTCTGTTTTCACTT GATGCATCAAGGGCAGTTGTCTTGTTAGATCGGTTTTCAAATCTAAAAGGTGAGTCTCTTGAGTTTGCCACTGGTCTTGT TGAAGATGTGTTGAATGGGAAAGCAACATCAGATTCCCTTCTGCTGGAAAGCCATGGTCAAAGTGCGAACAAAGAAGATT TAATATCTGTCAAGGAATTCATTTACAGGCAATCAGATATTTTGAGAGGGAGAGGGGGGATAGTTAATTCCAACAGTGGC TCAGCTGCTGGTGTTGGTATGGTTGCTGTTGCAGCAGCTGCAGCTGCTGCGTCAGCTGCATCTGGGAAAACATTTACTAC TCCTGATCTTCCAAATTTTGAAATTTGGTCAAGTTCTAGCCATCATATCTTGAGTAGAATTCTCTGTGCAAAAGGGGGTT GTTTGGATGAATTGGAAATTATTAAAAGAAAACCCCGTCCAAGGAACACTGTTTCTTCTTCAACGGAAGGGCCTTTAAAG AGTGCAAATCCTTTAGATGTTGCAGTATCTTGGTTACAGTGTGGGAGAGGGCTGAACACTAAGTTTTCGACTTTGTGGTG TCAGAGAGCCATTCCAGCTGCAAAGGAGATTTATTTGAAAGATTTGCCTGATTGTTATCCTACTTCACAACATGAAGATC ATTTAGACAAGGCTTTGCATGCATTTCACTCAATGGTAAAAGGACCTTCAGTGCAAGTTTTTGCAAGAAAATTGGAAGAG GAATGTACTTCCATTTGGAAATCAGGAAGGCAACTATGTGATGCTATTAGTTTGACGGGCAAACCGTGCATGCACCAAAG GCATGATGTTGAGACTAGTAATTCGAACATAGGAGCTTCCCCGCCTTCACACAAGCCCCATTCAAGTGGCTATTTTTTCC TTCATGCCTGTGCTTGCGGTCGTTCCCGTCAATTACGTCCAGATCCCTTTGATTTTGAATCAGCTGATGCTAGTTGCTTT TCTGACTGTGACAAGCTACTTCCTTCGGTCAAACTACCAGAAATTGAAGTTGCTGGACCTGTTCAATCTTCTGCATGGAG TTTGCTTCGAATTGGAAGTGCAAAATACTATGAATCCTCTAAAGGCTTACTTCAAAGTGGGTTTTGTGCCACTGAGAAAA ATCTTCTGAAATGGACAGTCTACCTAGAGAAACAGAAAAGACCAAATGGCTCAACAGAGACTATAGTGAAGCAAAGTTCT GTAATAAGGGAACCCAAGGTTGAACATATTGCAGATACAAAGAAAACTGGAGTTAGAAAGCCCCACCCTGCTGTGCAGAA TGGAGGGGGAGACCAAAGAATGTCTTTAGGTATATCCAAAGATGATGACAAAAAGATAAGTTTTGGTAGGGGTTTTCCAA TTTTCAAAATGAGAAAACCTTTTTCTGAGGTTGTTGCTGGATCAGCGGCTGTCGATTCTGGATTCCCTCCTCTTCAGCAA AGGAAGTTGCCTGCATCAGGTTCAGAAAAGGGCATGAAGCTAAGCAAGCCAAGTAATCAAAATGGAGAAAGGGTTAATGC AGCGGTCGATTATGAAATATCTCAAAAATCCCAAGATATATCGTTAACTGAGGGATCTCTTGATGGTAGTGGCAATAATA GCTGCAGGGATGATGACCCCTTTTTGAGGATAGGTAGCAACGTAGTACCTGTATACTTAAGTGGCGGTGAAAGGAGCAAA CCACATTCTTCTTTAAAACATGTAATAGTATATATTGGATTTGAGCATGAGTGCCCCCGTGGCCACCGTTTCCTGTTAAA TGCACGTCATCTCAATGAACTTGGATCTTCATACTCATTGTCAGAAGAATCTTGTATATCTTCTTCTATGGAGCCTGCTA GCATAAATCAAGCATATCATTCTAGAGTAAGTAAGAATGCTTCCTGGGCCAAAGTTCATCAAAGCTCTAATGAAATTCCT CCTGCATCCACAAATAAGGAAAGGGATGCGGACAAATCAAATGAAATGATGCCTAATGGCGATTTGAATTCAGATGGGCT ACTTTATACTTCCATTCCACTGAAGGAACAAAATTTGACATCTGGGAATGCATTGGCAAAAACCCAAAATCTTATGAAAG ATTCTGGTGGGGATCTTCAAGCTATTGGCATGGGTGGTGATGAACTTGCATTCTCCATGTTGAACCGAAACTTGCCTATC TACATGATGTGTCCTCACTGCAGGAATTCTAGGAATATGAAGGACACACCAAAGGTTAAGTTTGCCAGTGGTATCTCACA GCTTAAAAGGATATTTTTGGTATGAGTTGCTGCTTATATAGTTTTAATTAGCATCATTCTATTTGTTCGGTTAATATAAG GCACGTTTATATTGAAATATCTTCTAATTTTGGAGTGTTTTTGTCATTTACTGAGTTTTTGTTTACCGTAAACTACATTT TTTGCGTATCTGCTTTATGTATAAGAAATGGTGTATCACTTTATGGGCTAATAAACTTGTGCTTTCATCTCCATTAAATT ACTTTATTTTCTTTTTTTTATCGCATAAGATAAACTAAAATTTCGTTGTATATATATTTAAAGATAAGGTATCATTGATT GACGTGGTGCAGTTTCTCAAACAAATTGATGCTTTTTAGTTTTTATACTGTTAAAGAAAGACAACATATGGATGATGAAG TACTTCTAACTTGTGATGTAAATACCGTTTTTGTTTTTGTTTTTTAAATTCACATCAATTTCTTACTTATCTCCTTATCC TCATGTTCTCAAATTAAAATATGACATGGAGATATGTTTTTCACTATTAAATACCCTCCATTACAAATATGTTTCTGTTT AAAGATATAAAGAATTTGTTCTAAGTATTTTGAAACAAATATTGTTCCGCCCATTACGTTGTAGTTTTTTGTGTTTTTAC CATTGACATCTCCAAGTTCAAATTAACTGGTGAGCAGTTCATCATTAATTTTGGTTTGTTCGGCATTAACTTTGGCAGTT GAAAACTGAATGTTTGAGTTTGCTGATTTATGTTTTGGATGCCACATGATATTGATGTTTCAGTTTCTTAAGATAATAAT TCTATGTCTATAATAATTTTCTTCTGATCACTAATCTAATATTCTATTTTGCTGTAGGTGACACCTGCATTTCCTGTAAT ACTAGCAACATGCCCTGTCGTGCAATTTGAGGTATGTCTTTCTTCTGTTAGTGTACATTTCTTGAAAATTTTGAATGTAA ATAAAAAGTGTACATATTTAAAATGCTAAAACTTTAGGTTGTGAGAAATGGGTGTTCTGAGATGGGAAAAGTAACCCTCT GGTGTGTACTGTGGGCCCAATTTGCATCGATATATGTGGTGTTTGTCTAACACCATTGCTTCATCCTATTAATTGCTGAG ATTACTTAAACAAAAAATGTACAATCAAAATTCAGAAGATACCTGTGATTTATTAGCTGCTGCTATCCTGAACTGGTTTC CTCATTGGGTATCCCTGAATGATTTATTACCTGCGATTTATGAGGCTGGGATGTTTGATTAGATCCAGTTTATGCATGCT ATTTGCTCTTAACCCAGGATTGTTGTTTTGACTTCAAAATTACATTTTGTTTTAATTATTGTTATTCTGCTCCTCCGTCT AATATTTAGCTCTTTTGTCCTTGCAGACATCATGCCTGCCTCCGTCAGTTCCAGATCGTGAACAAAAATTGCAGTTTAGC CCTGGATGTCCAGTGATCTTGCCACCTGAGAGTTTCCTGACCCTTAAGTTACCCTTTGTGTATGGTGTGCAGCTTGAAGA TGGAAACAAGCATCCTCTTAACCCCTTTGAACATCAGCCGGAAATGACTGCTTGGATCACTAAGGGCTCAGTACTGCAGA TCTTGTCCAAGGAGAGCAATGATGAGGGATTTCAAACATATTAAAAGCGTATTAAATCTTCAAGTTGCCTAGCTAGAGTA AAAAGGAAAGGATATCAATTGCTTCTCCAAAACTCAGGTGAAGGTCAACCCCCTCTTCGAGCTGACATTTTGTTTTAAAA ATGTAATGGGAAAAAGTATGCACCTTGCAACAATTAACTCATCATATTAACTAGATTCGGTATATTAAAGGAAACACAAT ATATTATGTGCTGAATTATTTCAATGTTTAGCTCCTCATAGTCTCAATCAAGAGTATATCCTGATTCCTGTCCTCTTCAT TCAATGAGCATGCATGCATGCATTTTTAGGGTTAAAAACTGAGTGATAGATCATAGATGTGTCAAGTCAAACATTGGGCC ACTAATGCTATTAATTGATACATTTGATTGTTTCACACTTAATTGTGTTTGTGACTTAATGGGTATTTTTTAGTTGGATT CGCATTGTCTTATTACTTGACTTAGGGTTTTTAATGTTGCTAGGTCACCCATATGAACTTCTGATTAGAGATGTGTGTAC AGAACAAGGAACTTTGTGGATGATGAGTATGGTCCGGAATGGAATTACAGAGCTGCATGTAAACACACGGGGTACATCAT CATTCAGGCACGAACTGGTAACATGGATCCACCTGCTAAATCATAGCAAGGTCTGATATATGAATTGTTTATATCTACTT TCTAGCCTTTTAATCAGGTGCAGTTTTGGACCTCTCGGTTACTTATAGCCCTGGGGTGGCTTCCTAGCTTGTTCATCTGC TCTTTGGATAATCTCGTGCGTAAATGCAAATCCATAATTTGAGTATTGCTGTCCAAATGGATTTGGATGACAATTCCATT CAAAATGAAAGTATTCGAAATTGAGGGCAATCATAGATGTGTGCATCAATAACCAGAGAATTGGAAAGGTCCTTGTTATG GTACGTTTTGTTCTATGCACTCTTTATATTTTATATTTAATTCATCAATGGTTCACTCTCAAAAGTACTTCATTTCTTAT ATGATAAGATGTACTCTTTAGCCTTCCGGACAATAAATTGGTTGTGTGTTGCTTGGATCTTCATAATTTGACTAGTTTAA TATGTTCTATTCTATTGGTGTAACAAAATTAATAAATAAGCAAATAAATTAGTGGAGTTTGTTGATTTATGCAAGGTTGG GGGAAAGGAAATGTTAATTGTTGGCATCTGTCACGGCTATTGGATAAGCAACTCTTAAATATTTATATTGAAGCCCGTTA ATTGATTTGCTTACTAGAATAAGATAAGGACTATGGACTAACTCCTAATTTACAAATTAAATAACCTAATTATTTGGTTT TACATGATTCTTGGACCTCCTTAAGAATGTTTGACCCCGTAATAATTAGTACTTCAGCCTGAACAAAGAGTCTCTGTCGT AATTATTTTTTCCCTTCCTGCATGCTACTTATTTATTTTCACCTGACTGCCACTAAACCTTCCTGTTCTTGAAATTTGAA ACTGGCACAGCCTAACTGATGGTGAAAATATGTTTGCAGGTGAAACCTCTCAAGCTGTAGTTGATGGAAGGGTGGATGGC ATCATCTATACATAGAATATCATGTAACCAAGACTCTTATTATTGTCTTGTAACATAGTGATCCTGGTGCATCTCTAATA ATACTATACCAACAGGTAAAATGGAGAAGGAAAGCGTAGCAAGGAAAAGCCATGCGCATTGCTTGATTTCCAGGGAGATG GGGGGCTCTGGAATGAGGCATTACGATTAATGTTGTGCATGATGTTAGATTTGTAGTATTGAGTCTTGGATCTGTGTGTG ATCTTTGTGACAGATTGACTGTGTATAGAAACTTCGATTATCTGCATTCTACTTTCTCAACCAACGAACATTAGAGGGGA ACAATTAAACCCGTCTATCTTTCCCCTCCATACACTTCAATTACTTTTAGATGCTCAAACTAAATTACTTATGTTCTCCT TATTGAAATTATATTTACACCATGGTCTTTTAGCATCACCATATCCATATGGCTAAAAGAAGACACTAAAAGCGTTTTTA CCGTGGCTGAACTTGGTTGTCCGGTCAACGAAAAATGGATTAAAACTAAAACGTAGTGTTGGTCAAAATGTAGCATAGGC CAGAATTGTTTTATGTCAAGGGTGCTTTAGTTGTTTCATGTCAATTTGAATATTAGCAAACTTCATATGGATTGGATTGA AACAATTATCTAAACTATTTTTCATATGAAGAAGTCGTAGTTACAAAAATAAAATAAAATTCCTTAACTGTAAGTTGAAT TGAGGTTAAAAGTGTTTTTTCAACTGTTACTCAATTTTAAGATGCTAAAAGTGGAATATGAAAAATGTTGGATTGAAGTT AAAAGTATTTTCCATGCTTTTCTGACGACCCTAATGATAAAACACTTTCATGAGCACCTTATAAAAGCTATGAATGCACC ACATTTGTATGTTCAACAAGGCATTTTATAACACAAGTTTATTTTGGATACATAAGAAATGAATGTTGTGACGCAACTTA AATTTAGATTTGTTTATAAGTGGCGATTTTTTTTTTTTGTAATAGATAAATCTTAGTCTCGGTGGTTGGTTTCCAATTAT TCTAG
CDS sequence (LotjaGi3g1v0169100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGCTCGAAACCCTTCTTCTCCCTCTCCGGTTCGAGTCCTCATCCGCCCTCCACCACCGTCCTCCTCCTCCTCCTC CGATCATCCCTCGGCGGCGCTCCCTCTCTCCTCCTCCGACGGCGGCGTCGTAGTTGTCGGTTTCATCGCTCGACGAAGCG ACGACTCTGCTCACCTCCTCAACCGAGTCATCGACTCCAACGTGTTCGCCTCCGGCAACCTCGACAAGCCCTTACTCTTC GACGATGAGGAAGCTACGGACTGGTTCAACCGCAGGAGAATCAGCTACTTCCGCGACCACGATAAGGGCATCCTGTTCCT CCACTTCTCGTCCTCTCTCTGCTCCTCCTCCCCGGAGCCCTCACCGGGATTCGACTCCGCCGTCGAGGAGCAGGAGTTCG GTGACCTCCAGGGAATGCTCTTCATGTTCTCTGTTTGCCATGTAATCATATATGTTCAGGAGGGGTCGCGGTTTGATACC AGGGTTTTAAGGAATTTTCGTGTGCTGCAAGCGGCCAAGCATGCGATGGCTCCGTTTGCGAAGTCTCAAACTATGCCGCC ATTGCCGTCTAGATCGCATTCTTCGTTGTCCTCCAGGCCTACCTCGTCGGCGAATAACTCTTCTCCAGGTAGAGGAGGCG GTGGTAACGTGAGTCGCAATGGGTCAGCCATGTCTCTCATGTCAGGTTTAGGTTCTTATGCTTCTTTGTTTCCAGGACAG TGCATTCCTGTCACATTATTTGTGTTTGTCGATGACTTCTCCAATTTATCAAATTCCAGCACTAATGGGGAGGAGTCTTC AGATGTTTCTTCACTTAGTCAGTCTAATAGTATGAGTAGTGCAGCCAAGGCGAACTTGCCTGCTAAAGTTTCTGGTTCAG TAGTTATGCTGGCACGCCCTGCAAGTCGTTCTGAAGGCGGATTTAGGAAGAAGCTACAGGCATCTCTTGAAGCGCAAATT CGCTTTCTGATTAAGAAATGTCGTACATTATCTGGTTCTGAAATTACTCATTCTGGTGTGAGGACTGGGGGCACCTCAAC TTCTGCACCTCTGTTTTCACTTGATGCATCAAGGGCAGTTGTCTTGTTAGATCGGTTTTCAAATCTAAAAGGTGAGTCTC TTGAGTTTGCCACTGGTCTTGTTGAAGATGTGTTGAATGGGAAAGCAACATCAGATTCCCTTCTGCTGGAAAGCCATGGT CAAAGTGCGAACAAAGAAGATTTAATATCTGTCAAGGAATTCATTTACAGGCAATCAGATATTTTGAGAGGGAGAGGGGG GATAGTTAATTCCAACAGTGGCTCAGCTGCTGGTGTTGGTATGGTTGCTGTTGCAGCAGCTGCAGCTGCTGCGTCAGCTG CATCTGGGAAAACATTTACTACTCCTGATCTTCCAAATTTTGAAATTTGGTCAAGTTCTAGCCATCATATCTTGAGTAGA ATTCTCTGTGCAAAAGGGGGTTGTTTGGATGAATTGGAAATTATTAAAAGAAAACCCCGTCCAAGGAACACTGTTTCTTC TTCAACGGAAGGGCCTTTAAAGAGTGCAAATCCTTTAGATGTTGCAGTATCTTGGTTACAGTGTGGGAGAGGGCTGAACA CTAAGTTTTCGACTTTGTGGTGTCAGAGAGCCATTCCAGCTGCAAAGGAGATTTATTTGAAAGATTTGCCTGATTGTTAT CCTACTTCACAACATGAAGATCATTTAGACAAGGCTTTGCATGCATTTCACTCAATGGTAAAAGGACCTTCAGTGCAAGT TTTTGCAAGAAAATTGGAAGAGGAATGTACTTCCATTTGGAAATCAGGAAGGCAACTATGTGATGCTATTAGTTTGACGG GCAAACCGTGCATGCACCAAAGGCATGATGTTGAGACTAGTAATTCGAACATAGGAGCTTCCCCGCCTTCACACAAGCCC CATTCAAGTGGCTATTTTTTCCTTCATGCCTGTGCTTGCGGTCGTTCCCGTCAATTACGTCCAGATCCCTTTGATTTTGA ATCAGCTGATGCTAGTTGCTTTTCTGACTGTGACAAGCTACTTCCTTCGGTCAAACTACCAGAAATTGAAGTTGCTGGAC CTGTTCAATCTTCTGCATGGAGTTTGCTTCGAATTGGAAGTGCAAAATACTATGAATCCTCTAAAGGCTTACTTCAAAGT GGGTTTTGTGCCACTGAGAAAAATCTTCTGAAATGGACAGTCTACCTAGAGAAACAGAAAAGACCAAATGGCTCAACAGA GACTATAGTGAAGCAAAGTTCTGTAATAAGGGAACCCAAGGTTGAACATATTGCAGATACAAAGAAAACTGGAGTTAGAA AGCCCCACCCTGCTGTGCAGAATGGAGGGGGAGACCAAAGAATGTCTTTAGGTATATCCAAAGATGATGACAAAAAGATA AGTTTTGGTAGGGGTTTTCCAATTTTCAAAATGAGAAAACCTTTTTCTGAGGTTGTTGCTGGATCAGCGGCTGTCGATTC TGGATTCCCTCCTCTTCAGCAAAGGAAGTTGCCTGCATCAGGTTCAGAAAAGGGCATGAAGCTAAGCAAGCCAAGTAATC AAAATGGAGAAAGGGTTAATGCAGCGGTCGATTATGAAATATCTCAAAAATCCCAAGATATATCGTTAACTGAGGGATCT CTTGATGGTAGTGGCAATAATAGCTGCAGGGATGATGACCCCTTTTTGAGGATAGGTAGCAACGTAGTACCTGTATACTT AAGTGGCGGTGAAAGGAGCAAACCACATTCTTCTTTAAAACATGTAATAGTATATATTGGATTTGAGCATGAGTGCCCCC GTGGCCACCGTTTCCTGTTAAATGCACGTCATCTCAATGAACTTGGATCTTCATACTCATTGTCAGAAGAATCTTGTATA TCTTCTTCTATGGAGCCTGCTAGCATAAATCAAGCATATCATTCTAGAGTAAGTAAGAATGCTTCCTGGGCCAAAGTTCA TCAAAGCTCTAATGAAATTCCTCCTGCATCCACAAATAAGGAAAGGGATGCGGACAAATCAAATGAAATGATGCCTAATG GCGATTTGAATTCAGATGGGCTACTTTATACTTCCATTCCACTGAAGGAACAAAATTTGACATCTGGGAATGCATTGGCA AAAACCCAAAATCTTATGAAAGATTCTGGTGGGGATCTTCAAGCTATTGGCATGGGTGGTGATGAACTTGCATTCTCCAT GTTGAACCGAAACTTGCCTATCTACATGATGTGTCCTCACTGCAGGAATTCTAGGAATATGAAGGACACACCAAAGGTTA AGTTTGCCAGTGGTATCTCACAGCTTAAAAGGATATTTTTGGTGACACCTGCATTTCCTGTAATACTAGCAACATGCCCT GTCGTGCAATTTGAGACATCATGCCTGCCTCCGTCAGTTCCAGATCGTGAACAAAAATTGCAGTTTAGCCCTGGATGTCC AGTGATCTTGCCACCTGAGAGTTTCCTGACCCTTAAGTTACCCTTTGTGTATGGTGTGCAGCTTGAAGATGGAAACAAGC ATCCTCTTAACCCCTTTGAACATCAGCCGGAAATGACTGCTTGGATCACTAAGGGCTCAGTACTGCAGATCTTGTCCAAG GAGAGCAATGATGAGGGATTTCAAACATATTAA
Protein sequence (LotjaGi3g1v0169100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEARNPSSPSPVRVLIRPPPPSSSSSSDHPSAALPLSSSDGGVVVVGFIARRSDDSAHLLNRVIDSNVFASGNLDKPLLF DDEEATDWFNRRRISYFRDHDKGILFLHFSSSLCSSSPEPSPGFDSAVEEQEFGDLQGMLFMFSVCHVIIYVQEGSRFDT RVLRNFRVLQAAKHAMAPFAKSQTMPPLPSRSHSSLSSRPTSSANNSSPGRGGGGNVSRNGSAMSLMSGLGSYASLFPGQ CIPVTLFVFVDDFSNLSNSSTNGEESSDVSSLSQSNSMSSAAKANLPAKVSGSVVMLARPASRSEGGFRKKLQASLEAQI RFLIKKCRTLSGSEITHSGVRTGGTSTSAPLFSLDASRAVVLLDRFSNLKGESLEFATGLVEDVLNGKATSDSLLLESHG QSANKEDLISVKEFIYRQSDILRGRGGIVNSNSGSAAGVGMVAVAAAAAAASAASGKTFTTPDLPNFEIWSSSSHHILSR ILCAKGGCLDELEIIKRKPRPRNTVSSSTEGPLKSANPLDVAVSWLQCGRGLNTKFSTLWCQRAIPAAKEIYLKDLPDCY PTSQHEDHLDKALHAFHSMVKGPSVQVFARKLEEECTSIWKSGRQLCDAISLTGKPCMHQRHDVETSNSNIGASPPSHKP HSSGYFFLHACACGRSRQLRPDPFDFESADASCFSDCDKLLPSVKLPEIEVAGPVQSSAWSLLRIGSAKYYESSKGLLQS GFCATEKNLLKWTVYLEKQKRPNGSTETIVKQSSVIREPKVEHIADTKKTGVRKPHPAVQNGGGDQRMSLGISKDDDKKI SFGRGFPIFKMRKPFSEVVAGSAAVDSGFPPLQQRKLPASGSEKGMKLSKPSNQNGERVNAAVDYEISQKSQDISLTEGS LDGSGNNSCRDDDPFLRIGSNVVPVYLSGGERSKPHSSLKHVIVYIGFEHECPRGHRFLLNARHLNELGSSYSLSEESCI SSSMEPASINQAYHSRVSKNASWAKVHQSSNEIPPASTNKERDADKSNEMMPNGDLNSDGLLYTSIPLKEQNLTSGNALA KTQNLMKDSGGDLQAIGMGGDELAFSMLNRNLPIYMMCPHCRNSRNMKDTPKVKFASGISQLKRIFLVTPAFPVILATCP VVQFETSCLPPSVPDREQKLQFSPGCPVILPPESFLTLKLPFVYGVQLEDGNKHPLNPFEHQPEMTAWITKGSVLQILSK ESNDEGFQTY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 37 | 37 | - | – | |
| MobiDBLite | 19 | 34 | 16 | - | – | |
| PANTHER | 23 | 1199 | 1177 | 0.0 | ||
| Pfam | 39 | 182 | 144 | 7.2E-10 | ||
| MobiDBLite | 180 | 220 | 41 | - | – | |
| MobiDBLite | 185 | 220 | 36 | - | – | |
| Pfam | 533 | 674 | 142 | 5.7E-34 | ||
| MobiDBLite | 772 | 792 | 21 | - | – | |
| MobiDBLite | 829 | 856 | 28 | - | – | |
| MobiDBLite | 984 | 1014 | 31 | - | – | |
| Pfam | 1062 | 1189 | 128 | 1.1E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins. |
Expression pattern of LotjaGi3g1v0169100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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