Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi3g1v0184200.1

Overview

Field Value
Gene ID LotjaGi3g1v0184200
Transcript ID LotjaGi3g1v0184200.1
Lotus japonicus genome version Gifu v1.2
Description Receptor-like kinase; TAIR: AT5G22050.2 Protein kinase superfamily protein; Swiss-Prot: sp|Q9FX99|Y1497_ARATH Probable receptor-like protein kinase At1g49730; TrEMBL-Plants: tr|A0A151RM72|A0A151RM72_CAJCA Putative LRR receptor-like serine/threonine-protein kinase family; Found in the gene: LotjaGi3g1v0184200
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:25794464..25797163) extracted from Lotus japonicus Gifu genome v1.2.

ATGAGAGTGAGTGACGTTGACGCACGTTGGAATCGATTCCCTCTCTCTAATCTCAACACTTACTCAGAAAAAAACAGATT CGTTTTACTTTTCCTTCATAAAAAAGCTGTTTCCATATTTACCAACCAAACAAGTACAATTCCGAAAACGAATGGAATTT GACGCTGTTATCATCACCTCACTCGACTCCGTTATTCTTAACCGACACTTCCCACCACCACCATGGATCCCTTCCTCCGC AAGCTCCGCCGCCACCTCCTCCGTTGGCTCCACCGATCTCGCCGCTCCGGTAACCCCAATCTCGTTCAACTTCAATTCAA TTCTCAATCACTTCACTGATCACACTGTTAATTCCAAATTGCTTGTTGATCAATTTTGATTTTGATTCAAGAATTGTTGA TTCCTGTTTCAATGTGCAATTGATTGTGAAATTTAGAACTGTAGCTTGATGATTGTGTTGAATTGTTTTCAGGATCGGTG TTCTTTGTGAGGAGAATTTCGTACAACGATGTTCGAAGCGCAACCGATGGTTTCCGCAGAGTGGTTTTCAGCAATTCTGA AGTTTCTGCATATGCGGCCAATTTTGGAGAGGGTGGTGGTGGTGTTTGCTTGGTGAAAGAATTGAAAGATTTTGATCAAC GAAATGGTGACAGTTTTCACCAACAAGTGCAGTTCTTGGGGCGCTTGCATCATCGCCACCTTCTCTCGCTCAAAGGCTTT TCTGTTGGACGCAATCGCAAGAGGTAGTAGGTGGCTTCAGATTACAGTAACTTTGTTTTTTCATTTTTTTTTCTTGATTT GGTTGATTTGGAATTAATATATAATAGACATTTCTACTTTTGAGATGATAGAATTGTAGTTTGGTATCAGATAATTATTT GGGTTCCAACATTAGAAAAAGCACTTATGAATTTATAGTTCTTGATGGAGAAGTTAGATGATAGAATTCTGAAAAATTTG AGGTGTAGAAATTGATTTTGATTATTAACTTATATGGGAGAAGCTGTTGTATAGAGTGAAATAAGTTACTCAAATTCATT GGAATTTCTTTTTCTTTTGGACATGGAACATTATTAGAGTAACCTTGATATGGGTGTAGATAGCAATATTGTAACTTTTC CTTTTGGGTTATTTCTGCAGACTGCTCATATTTGACAACATAGAAAATGGAAGCTTAAAGGAGCATCTAAATGGTAAGCT CCGAAATGAGGAAAAATAAAATTAGCATGTTGATAACTTTTACACAATTATAATTTTGTTTCATTGATTTGATGCTGGCA GACCCTTTGAAGACTCCCTTGAGTTGGAGGACAAGGTTGCAGATAGCTAATGGTGTTGTGGCCGCACTGGTAAACTTTAC AAATTAAAGCATGTCCAAAATGATGCATAATATTTACAGCTTGAAACTACACACGTCTCATTCCATTTTCTACTGCAATT AATTTGAATCCTAAATTGATCATGGGTGGGGGGAAATCCCTGCTAAATTGGAACTGTTTATTACCTGGTTGTGCTATGCC CCCTTGTGAAAGAAAAGTTTGTGCTGTTATGAGTGAGGAATGATGTAATGTTACCGCCTTTAGAGCATAAAATTCTGTGT TTTGATACCCAAGGATTTTAGGATATGAACAAGCAGTAGAAGCTATAGAACTTGTCAAGCATGGTTACTGATTTTCGCCT CTACTTCTTGATGCAGAAATACTTGTTTCTTTTCAGTGATCCACCAGTATGTCATGTCTCTATCAGCTCAGGCAATATTA TGTTGGACGAAAACTTCACTGCTAAGGTAAGGAAGTACTTCCCTTTCTCATTGTAAACTCACCTTTTGGCTGAATTTAAT ACATGTTGAAGGCAAATAACACTCTAAATTTAAAATTAAATTAAATGAGATTTCCTTCTGTAATCACAGCTATCTGACTT TGGCCTTCTTACATCTGGTGGAAATTCTGTCATGATCCCAAAATCAGAAGGTTACTTCTCTTTATAAACTATTCTTACAA CAAAAACAAATTTGAACTACTTTACTCTGTTACTTTACATTTGTGTGCTCACCAGTCTAATCCATTTCAGATTCCATGGG GCAGAAAAGTTGCAAGATTATATTCCAACTTGGAGTGCTCATACTGGAATTGGTAACAGGTCAGTCTTCAGAGATGGAAG GTTCTGATTTAGTTGAATGGATCCAAGAGTCCCGATTTTACAGTTCGATAGATAAGATGATAGACCCTGATCTTGGGAAC AGTTATGACTGTACTGAGCTTAAAAGTCTTCTAGCGGTCGCAAAATTATGTATCAAATCATGGGACAAGCCTTCATTTAC AATTCCTCAGTTTTTTGGGTATCTCCAAAACAAGATTGATATTCCCCATAACTAGCTTTGTTACTTGTTTTGTTTGAAGA GCTTGGGTTTATTGGGAGAATATTACTCAGTGTGAATACTTACACGTTTCTTGCCTCTTGTAGTCACAGTTTCTTTAACC TCATATGAAATTGAATACGAGAGAAATGCTAGCTAGTCACATTTTTTTATGACCAGGTATTTGCACAGTCATTGGCTCAT TGCCCTTAGGGCTGAACACTAACCCTCAACCTCGGAGTAGTGACTAGATTAGATAAATTCATTCTTAGAATAGATACTGA TTCGTTCATAAACAATTTCTTACATCTCGTTTTAATCCATTTTCTCTCTTCGTTTCTTAT
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0184200.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGATCCCTTCCTCCGCAAGCTCCGCCGCCACCTCCTCCGTTGGCTCCACCGATCTCGCCGCTCCGGATCGGTGTTCTT TGTGAGGAGAATTTCGTACAACGATGTTCGAAGCGCAACCGATGGTTTCCGCAGAGTGGTTTTCAGCAATTCTGAAGTTT CTGCATATGCGGCCAATTTTGGAGAGGGTGGTGGTGGTGTTTGCTTGGTGAAAGAATTGAAAGATTTTGATCAACGAAAT GGTGACAGTTTTCACCAACAAGTGCAGTTCTTGGGGCGCTTGCATCATCGCCACCTTCTCTCGCTCAAAGGCTTTTCTGT TGGACGCAATCGCAAGAGACTGCTCATATTTGACAACATAGAAAATGGAAGCTTAAAGGAGCATCTAAATGACCCTTTGA AGACTCCCTTGAGTTGGAGGACAAGGTTGCAGATAGCTAATGGTGTTGTGGCCGCACTGAAATACTTGTTTCTTTTCAGT GATCCACCAGTATGTCATGTCTCTATCAGCTCAGGCAATATTATGTTGGACGAAAACTTCACTGCTAAGCTATCTGACTT TGGCCTTCTTACATCTGGTGGAAATTCTGTCATGATCCCAAAATCAGAAGATTCCATGGGGCAGAAAAGTTGCAAGATTA TATTCCAACTTGGAGTGCTCATACTGGAATTGGTAACAGGTCAGTCTTCAGAGATGGAAGGTTCTGATTTAGTTGAATGG ATCCAAGAGTCCCGATTTTACAGTTCGATAGATAAGATGATAGACCCTGATCTTGGGAACAGTTATGACTGTACTGAGCT TAAAAGTCTTCTAGCGGTCGCAAAATTATGTATCAAATCATGGGACAAGCCTTCATTTACAATTCCTCAGTTTTTTGGGT ATCTCCAAAACAAGATTGATATTCCCCATAACTAG
Download CDS Sequence

Protein sequence (LotjaGi3g1v0184200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MDPFLRKLRRHLLRWLHRSRRSGSVFFVRRISYNDVRSATDGFRRVVFSNSEVSAYAANFGEGGGGVCLVKELKDFDQRN GDSFHQQVQFLGRLHHRHLLSLKGFSVGRNRKRLLIFDNIENGSLKEHLNDPLKTPLSWRTRLQIANGVVAALKYLFLFS DPPVCHVSISSGNIMLDENFTAKLSDFGLLTSGGNSVMIPKSEDSMGQKSCKIIFQLGVLILELVTGQSSEMEGSDLVEW IQESRFYSSIDKMIDPDLGNSYDCTELKSLLAVAKLCIKSWDKPSFTIPQFFGYLQNKIDIPHN
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:3.30.200.20
26 118 93 4.8E-10 –
SUPERFAMILY
SSF56112
28 266 239 8.7E-28
IPR011009
ProSiteProfiles
PS50011
33 304 272 12.415
IPR000719
PANTHER
PTHR27001
35 290 256 1.1E-58 –
PANTHER
PTHR27001:SF20
35 290 256 1.1E-58 –
Pfam
PF07714
67 193 127 3.7E-16
IPR001245
Gene3D
G3DSA:1.10.510.10
120 212 93 1.0E-15 –
Gene3D
G3DSA:1.10.510.10
214 299 86 4.7E-7 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0184200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…