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Field | Value |
---|---|
Gene ID | LotjaGi3g1v0187000 |
Transcript ID | LotjaGi3g1v0187000.1 |
Related isoforms 4 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Caffeic O-methyltransferase; TAIR: AT5G54160.1 O-methyltransferase 1; Swiss-Prot: sp|Q00763|COMT1_POPTM Caffeic acid 3-O-methyltransferase 1; TrEMBL-Plants: tr|I1NCR8|I1NCR8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0187000 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:26306482..26313385) extracted from Lotus japonicus Gifu genome v1.2.
GTGGATAAGGACGTGTATATCTTATCCTAAGTTTTTGTTTTGGATAAGCAATTGATTAAATTGATAAAGGCACAAGCGGT GCCACCTACAGGGATCGTAGTGTTTAGTATAGTTTTCATTTCAAGTCCAGAAAATGGCGAACATTGGCAATTCACGAGAG GAATCAGAAGATGAAGAAGGCTTCTCGTATGCTATGCACCTTGTCAACTATACTGTGTTTCCCCTGTCATTACAAACCGC CACTGAACTTGGAGTATTTGACGTGTTGCAAAAAGCAGGTCCAAATGCTAAGCTCTCTGCTAAGCAGATTGCGTCCCAGC TTTCGTGCAACAAGAATCCAGCAGCGCCTTCAATGCTAGATCGCATCCTCGCCCTTCTTGCTTCGAACTCTGTTCTTAAA TGCTCTGTCTCTGTCCTTCAAGATGATGAACAAAACCTTGAAGCCTTTCAGAGACTCTACACCATCACTCCTGTAGCCTC ATTGTTTGCTCGCAATTCTGATGGTGTTTCCTTAGGGCCATTGATGGCCTTAAGTCATGACAAGGTCTTCCAAGCTAGCT GGTATGTTCCTCCCAAGAAAAAGAAAAAAAACTAATTCACAATTTAAGAATATAGTTAAAGTAGATAAGTGCATTAAATT TGTTCTCAATTAATATTGCCCTTTACTCACTTTTCTTGATTTTTATAGGATTAATGATCAAATTAGTCTCTGGGTTTGTA AACGAGTTTGATTTTAGTCCTTTTAGGAAAAAAACCATATTTAATGGCAGTCCTTTTTTCGAATATGTACATACTAGTAG TTTTTACCGTCACTAAACGTCATTTTTCTTCAGAGGAACTAAAATCATACTCGCTTACAAACTAAGGACTAATATGACCA TTAACTCGTTTTTATACATCATTAATGCTTAGAAAAGCATAAAGAGAGAAAAAGTTCAATTAGATAAAGGGTATTCTTGT CAAAAATTAATTAATGCACCATAAACTTCAAGTTGATTCTTCTAAGAAGAACCAAGATAAAACATCTTATTTGATTCATA TATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAAATA GGGCCAGAAGTAGTATTACTTTTCTTATTAATAGAAATACATGTGAGTCTCATTAAATTAAGAGTCCAACCCATATAATT CAATGAATCCACATAAATTTAACTAACAAAAGAAATATTGCTCGAAAAAGAATACAAAATGAGTGTTGATACTTGATAGT CTTTCTCATACCTTTAATTTTTAAAAGCATGACAAGAGCTAGTTTTTCAATACAGAAGTTTCTTTGTATATATATACACT ATGAATAGGAGAGCAAGATAACAGAAACTGCTGCATTTGTATTGTTCATGGTTAGGTCCCAACTGAAAGATGCAATTCGG GAAGGGGGAATTCCATTCAACAGGGCTCACGGTACACATGCCTTTGAGTATCCAAGCTTGGACTCTAGGTTCAATCGAGT TTTCAATGATGCAATGATCGATCACACCACTCTAGTTATGAAGAAGATTCTTAAACACTACAAAGGTTTTGAGGGCATAA AAAGGCTTGTGGATGTAGCTGGTGGCCATGGGATTAACTCGAACTTAATCGCTTCCAAATACCCTCATATTGAGGCTATC AATTTTGACTTGCCTCATGTCATACAACATGCCCCTCCCTATCCTGGTATATATATGACCTTTACTTTTGTTTTAAATGA ACTTGACTTCTAATCCTGCAAAAAGATAAAGATAAATTCAAGCCTCTAAGTAGATACTATCAGCTGTGCATTATTCATGT GTATCTATCTATGTTGAATACCAAAAGTAAAAGCTACGTAACGTTGCAGGAGTGGAGCACGTTGGAGGAGATATGTTTGA AAGTGTGCCTAAGGGAAATGCCATCTTTATGAAGGTGAGTGGTGGACTGGATAGGGTATTAGCTCTCTATTTTGTCTAGC TAGGGAAAATTTATTACAATGAGAGCTCTTTCATGTAGAGATTAGGTTTGGGCTTAACGTTCTTCCAATATACACTTTTG GCAGCGGTTAAAAACCTAAAATATATGTGGGATGAATGTGGAGAAAAATCATATATTACCTAATATTTTCATATCACAAT ATTTAAGTGTCACTAAAAAGTATGTCGGATGGATGTCAAGAAAAATCATATGTTATCAAACATTTTTAGTTTTGTTAGTA TAAACCAACCAGACTAGAAATTCGGACCATATGATACCTAACATTTTAGGTAACATATGGTTATACCTAACTATTATAGC ACCCTTCGAATGCTGACTATTTCAATAAAAAATGTTGAGTAAAATATAAAATTTCGCTTAAATGTATTGGAATTTTTGTT TGAAAACTGAAAATAAGAAATATTTTTAAAAAATGAAGTTTTTCTTTTCTATAAAAACTAAAAACTATATTACAAAACAA TAATCAAACATGCAATTATCATTTTCTTCTAAATAATATCAATTTGCAGTGGATACTTCATAATTGGAGTGATGACACTA CAAAAAAAACGTTATTTAGTGGGGGTTATTTAGCGGGGGTTTGGATAACGCCCGCAAATGTGGATAATTTTTAATAGTTA AGGGGGGTTTTAATAACCCCCGCAAATGTTTTATTAATTAACCCTCTCACTCTCGCACTCTCACTTCTCAGTCTCGTTCT CGATCTCGTTCTCAGTCTCGTTCGCCATGGAAGCTCACGATTTCAAGCGATTTCCACCGATTTGATCTCGTTTTCCACCG ATTTCCACCGATTTCAACCTCCACAGATTTCAACCACCGCACGCCACCGTAGCAACAACCTCCTCCGCCGTCGGTATGAC CTCTTTTTCCACCGATTTGATCTCGTTTTTCACCTTTGCTTTTCTTTGCTTTAAAAGCTGACTAACTGTTTCTTCTTCTT CATTCGCAGTTCTCTCTGCGATTTTCTCATGGATCCATCGCTCAGAGACTCAACAACTTCTACTCCGTCGCATGCTGCAT TCTCTGGTACTGATTTTTTCTTAATTAACCTTTTCAGATTTCTAAATTAGGTTTTCATTAGTTGATTTGGGAAATTGGGT CTGGTTTGGTCTTCAAAATGCTGGTTTGCAAGTCAGATTAAGTGGGTAGTTGTTACTAGTTTGAGGAGTTTGTTCCTCTT GAGTTTGTTTCCCTAGTGTGTTTGCCAATTGTTATCTGGTTCTTTCTTTTTGCCAAAACAGTAAGATGAACAGATTTTTA CACTGTGAGAATGTAACATTCTGTTTGATTATCTCCTTTTTATGCTATCAACAGTGTATTTTGTAGCAGATGACCCTAAC ATTCAAACCTGGATGATTTCTATCAATCTTTCAACCAATTAAACATGAACATCATATATATCTGAATAATTAAAATGAGA TATGGTATATATCAGCAAACCTACATTAACCAAAGTGTATTGAGCCATTATAGGAAGACAATTCTCTTTACCCATCCCAT TCTAATGTAGATGATACTTTGAACTTTCAAGGTAACAATGTGTCATTGAACAACAATGTATATCTTGGATGAATCAAAAT GACAGAAAAGAGCAAATCAATATATATCACTAAACTATAAGCTGATAGTTAATTATTCACCTTGATTACCAAAGTAAAGC TCTGTGTTGCTGTTCTGTGCTCAGTTTTCTTTGATTCGTTACTGCATTGCAATGTGTCTTTAATCATTTTCGTAATTTCT TGCTTGCTGCGATTTAGATGAAATTGGAATATCAATGTGAATGTATTGATTAAGATTTTGTGTGTGATTTACCGTAATCT GCTTTGTTCTGTTTGGTTTTGGCCAAGTAGCGATGCAAGCAATTGAGGTGAAGAATCATTCAACGCTGAATGGAAAAGTA ATAAGGGTCTTGTGGTCGCGTCGTGATCCTGATATTAGGAAGAATTGCATTGGGAATGTTTTTGTTAAGGTATATAGTGC TAACTAGCTACATTGCTTTGATTTGAGATATTGGTGAACCAATAGTGTAGTGTGGTTCATTGTTGTTACTGGAAGGGGAT TCTTATTGTGTTGAGTTTCTGGTGTGTGTATTGTGGCAGAACTTGGCAGAATCAGTGGATAGTGCTGGACTGGAAGAAAT CTTTAAGAAATATGGGAATATTTTAGTTGTCATGGCTGATGATGGGAAGAGCAAAGGATATGGGTTTGCTCAATTTGAAT CAGAGGAGTCTGCAAATGCTGCCATTGAGAAGCTCAATGGCTCTACTATCAATGATAAGCATATGCATGTGAGAATATTC TGCATTGGTTCTTAGTAATATGTTGAACATTTTCATTGTTTCTTTGATTTTCAAGCCTATAGTTGGTTGTTGTCTTCAAT TTCTGTATGCCTGTTATTTTCTGAGATCAATTTTGATATATATGATTGATTGATTCTTGTCACAGATATGTTGGGAGGTT TGTGAAAAAAAGTGAGCGCATTTTGCCTGGCCCTGATGCCAGATATACTAATTTGTACATGAAGAGTTTAGACCTAGATA TTACAGAAGCACTTCTGAAGGAAAAGTTTTCCTCTTTTGGGAAAATCGTTAGCTTGACTATTTCAAAGGATGAAAATGGG ATGTCAAAGGGCTTTGGCTTTGTGAACTATGAAAACTCAGATGATGCTAAAAGGGCCTTGGAAGCGATGAACGGAACACA ACTAGGTAGTTTTTTTTTTGCATCCTTTTACTGTGCTGGTTTTCTGCAGGCATAGTTGACATTTCTTGATGGTACATGAC ATGGTTTTGATTTGTCTTAAACAGGTTCGAAGATAACTTGTTTGCCATTCTCTCCTATTTTTAACTAGCCATTATGTTTT CAGTTGTCTTGAATGCTATGTTTTAACTTCCAGGGATCAAACATTTATGTGAAGAACATTGATGACAATGTAAGTGATGA AGAACTGCGGGGCCATTTTAGTGCATGTGGCTCTATAACTTATGCAAAAGTTATGAAGGACGAGAAAGGGATAAGCAAAG GGTTTGGTTTTGTCTGTTTCTCTACTCCTGAGGAGGCCAACAAAGCTGTGAACACTTTTCAATGTAAGTAAGTTCAGTTG TGTTTGGGACATGATATATGCTTCAGTGTAGTACTTTAGCAGTAATACAAAAACAGGAATATAATTGCTTGCTATAAGTT CATAAGAAAAAGAATGTAAGACTTCAGTGATATATTTATTGTGTTACTGCAATTTTACAAATTCATTGCATTGATCCTTC CCTGTGAATGTTCAACTTGCAGCATGAATCCTGGTTTTTCTCAGATCACTTTTTTGGACGCTTAGAAATTCATTTCAATA TCACTTATTTGGCACAAAGAAGTGTGGCGTATTTGTTAATTTATCACATAAGTTCATTTCAATATCACTTTCTTGTACCC TTAAAAATTCATTTCAATATCATTTATTTGCCACAAAGATCATAGCAAGTAAGGTAAAATTGTTTATAATCATCACCAGA AGCACATTTGGCCATTTTTGTGCTTCCTTGGTTCACTAGCTTCTTGTCATCAGAATGATTTGCTAATGATTATCATTGTT CGTTCTCCTTTTGTGTGTGTGTGTTTGGTATTATTTAGAGGTCATACGGTCATACCTCTAACTTTGAGTGAACATTGTCC TTGACTGAGATGATTTTACTGGTTGAGTTCATACTTTATATATTTAACTGAGCCTTAAGTGTATATATTTAACTGCCAGG AGATGCTACTATATAATCTCTTGCTAGCTGATATTATCCTCTTTGAGCCTTTGTTGAAGTTTCTCAACTGTTTTGCTTCT TTGTCAGGGATTTGTTGAGTTGAAGGGAATGGCTGATCGTATTATCAGTATGCGCCAACAACTTTTTGATGCTTTACGTT CCAGAAGTCTGCCTCTACTGAATTTCCTTTGCAATTTATTCTGCTTGTATTTGTCTGTATGGTCCTGTATCACTATTGTT TCACCAAATACCAGACTTTTTTGTTTACTCATTCTTTACTTCTGAAAAAATGAAGACTAGTTATGATAGTTAGGATGTTT AGGAAGCCTCTTTAAATGATTAATAAGTAAATGCAACAATTAAATGAGGTTAAAAATGTCCCTAGAATAAACTCTAGTAG CCAAGGGAGGTTTAAGGATGTTTAAAGCTGTAAATAATCTCTTGCATTTAAGGGAGGTTGAAAACTCCTGTTAAAAAAGC TTGCGGATAAGGGAGGTTTGAAACCCCCGCTAAAAACCGCCGCTAAATCCATATGCAAGTACCAGGGTTTGCTGAAAAAC GCCGCTAATGATTTGTGGGGAGTCTAACTTCGGGATTTTTCAAAACCCCCGCTAAGTAACTCGCGGGGGTTGAAAACCCC CGCTAAATGCAAAAAAAAACCCCACTAAATAACGTTTTTTTTGTAGTGTGAGCTATGCTTGAAGCTCTTGAAGAATTGCT ATAGTGCCATTCCTGATGATGGGAAGGTGATTGTTGTGGAGTCATTTCTTCCATTTGTACCTGAGAATAATCATGTTTGG AAGTCTGTATCTACATTAGATGTTCTGATGATGACTCAATTCTCCGAAGGGAAAGAGCGAACTGAGCAACAGTTCTTGGA ATTGGCAACTGCTACTGGATTTAGTGGCGTTAGATATGAATGTCATGTTTATACCTACTGGGTTATGGAGTTCTTCAAGT AGATATACGTAGAATTATTTATCTGTTTCAGAATTATTGTCCTAAATTAAGAGTATCATGTTTTGAATTATTTATGTTTT TATAATGAAAGATGAATTATATATCTTCGAGCAAATCTTCCCCAAAGGTCCATTTGGCGTGATTGTGAGTTTTTTTTTTT TTTTGTTTTTTTCAAATGTACATT
CDS sequence (LotjaGi3g1v0187000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGAACATTGGCAATTCACGAGAGGAATCAGAAGATGAAGAAGGCTTCTCGTATGCTATGCACCTTGTCAACTATAC TGTGTTTCCCCTGTCATTACAAACCGCCACTGAACTTGGAGTATTTGACGTGTTGCAAAAAGCAGGTCCAAATGCTAAGC TCTCTGCTAAGCAGATTGCGTCCCAGCTTTCGTGCAACAAGAATCCAGCAGCGCCTTCAATGCTAGATCGCATCCTCGCC CTTCTTGCTTCGAACTCTGTTCTTAAATGCTCTGTCTCTGTCCTTCAAGATGATGAACAAAACCTTGAAGCCTTTCAGAG ACTCTACACCATCACTCCTGTAGCCTCATTGTTTGCTCGCAATTCTGATGGTGTTTCCTTAGGGCCATTGATGGCCTTAA GTCATGACAAGGTCTTCCAAGCTAGCTGGTCCCAACTGAAAGATGCAATTCGGGAAGGGGGAATTCCATTCAACAGGGCT CACGGTACACATGCCTTTGAGTATCCAAGCTTGGACTCTAGGTTCAATCGAGTTTTCAATGATGCAATGATCGATCACAC CACTCTAGTTATGAAGAAGATTCTTAAACACTACAAAGGTTTTGAGGGCATAAAAAGGCTTGTGGATGTAGCTGGTGGCC ATGGGATTAACTCGAACTTAATCGCTTCCAAATACCCTCATATTGAGGCTATCAATTTTGACTTGCCTCATGTCATACAA CATGCCCCTCCCTATCCTGGAGTGGAGCACGTTGGAGGAGATATGTTTGAAAGTGTGCCTAAGGGAAATGCCATCTTTAT GAAGTCTCGTTCTCGATCTCGTTCTCAGTCTCGTTCGCCATGGAAGCTCACGATTTCAAGCGATTTCCACCGATTTGATC TCGTTTTCCACCGATTTCCACCGATTTCAACCTCCACAGATTTCAACCACCGCACGCCACCGTAG
Protein sequence (LotjaGi3g1v0187000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MANIGNSREESEDEEGFSYAMHLVNYTVFPLSLQTATELGVFDVLQKAGPNAKLSAKQIASQLSCNKNPAAPSMLDRILA LLASNSVLKCSVSVLQDDEQNLEAFQRLYTITPVASLFARNSDGVSLGPLMALSHDKVFQASWSQLKDAIREGGIPFNRA HGTHAFEYPSLDSRFNRVFNDAMIDHTTLVMKKILKHYKGFEGIKRLVDVAGGHGINSNLIASKYPHIEAINFDLPHVIQ HAPPYPGVEHVGGDMFESVPKGNAIFMKSRSRSRSQSRSPWKLTISSDFHRFDLVFHRFPPISTSTDFNHRTPP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PIRSF | 1 | 279 | 279 | 4.5E-90 | ||
Gene3D | 2 | 117 | 116 | 1.5E-34 | ||
PANTHER | 9 | 275 | 267 | 4.4E-115 | – | |
PANTHER | 9 | 275 | 267 | 4.4E-115 | – | |
SUPERFAMILY | 11 | 121 | 111 | 7.07E-24 | ||
ProSiteProfiles | 21 | 314 | 294 | 41.705 | ||
Pfam | 32 | 83 | 52 | 1.9E-16 | ||
Gene3D | 119 | 301 | 183 | 1.6E-47 | – | |
SUPERFAMILY | 123 | 268 | 146 | 7.25E-37 | ||
Pfam | 143 | 269 | 127 | 1.9E-41 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | O-methyltransferase activity | Catalysis of the transfer of a methyl group to the oxygen atom of an acceptor molecule. | ||
Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
Expression pattern of LotjaGi3g1v0187000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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