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LotjaGi3g1v0187000.2

Overview

Field Value
Gene ID LotjaGi3g1v0187000
Transcript ID LotjaGi3g1v0187000.2
Related isoforms 4
Lotus japonicus genome version Gifu v1.2
Description Caffeic O-methyltransferase; TAIR: AT5G54160.1 O-methyltransferase 1; Swiss-Prot: sp|Q00763|COMT1_POPTM Caffeic acid 3-O-methyltransferase 1; TrEMBL-Plants: tr|C6TMQ9|C6TMQ9_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0187000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:26306482..26313385) extracted from Lotus japonicus Gifu genome v1.2.

GTGGATAAGGACGTGTATATCTTATCCTAAGTTTTTGTTTTGGATAAGCAATTGATTAAATTGATAAAGGCACAAGCGGT GCCACCTACAGGGATCGTAGTGTTTAGTATAGTTTTCATTTCAAGTCCAGAAAATGGCGAACATTGGCAATTCACGAGAG GAATCAGAAGATGAAGAAGGCTTCTCGTATGCTATGCACCTTGTCAACTATACTGTGTTTCCCCTGTCATTACAAACCGC CACTGAACTTGGAGTATTTGACGTGTTGCAAAAAGCAGGTCCAAATGCTAAGCTCTCTGCTAAGCAGATTGCGTCCCAGC TTTCGTGCAACAAGAATCCAGCAGCGCCTTCAATGCTAGATCGCATCCTCGCCCTTCTTGCTTCGAACTCTGTTCTTAAA TGCTCTGTCTCTGTCCTTCAAGATGATGAACAAAACCTTGAAGCCTTTCAGAGACTCTACACCATCACTCCTGTAGCCTC ATTGTTTGCTCGCAATTCTGATGGTGTTTCCTTAGGGCCATTGATGGCCTTAAGTCATGACAAGGTCTTCCAAGCTAGCT GGTATGTTCCTCCCAAGAAAAAGAAAAAAAACTAATTCACAATTTAAGAATATAGTTAAAGTAGATAAGTGCATTAAATT TGTTCTCAATTAATATTGCCCTTTACTCACTTTTCTTGATTTTTATAGGATTAATGATCAAATTAGTCTCTGGGTTTGTA AACGAGTTTGATTTTAGTCCTTTTAGGAAAAAAACCATATTTAATGGCAGTCCTTTTTTCGAATATGTACATACTAGTAG TTTTTACCGTCACTAAACGTCATTTTTCTTCAGAGGAACTAAAATCATACTCGCTTACAAACTAAGGACTAATATGACCA TTAACTCGTTTTTATACATCATTAATGCTTAGAAAAGCATAAAGAGAGAAAAAGTTCAATTAGATAAAGGGTATTCTTGT CAAAAATTAATTAATGCACCATAAACTTCAAGTTGATTCTTCTAAGAAGAACCAAGATAAAACATCTTATTTGATTCATA TATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAAATA GGGCCAGAAGTAGTATTACTTTTCTTATTAATAGAAATACATGTGAGTCTCATTAAATTAAGAGTCCAACCCATATAATT CAATGAATCCACATAAATTTAACTAACAAAAGAAATATTGCTCGAAAAAGAATACAAAATGAGTGTTGATACTTGATAGT CTTTCTCATACCTTTAATTTTTAAAAGCATGACAAGAGCTAGTTTTTCAATACAGAAGTTTCTTTGTATATATATACACT ATGAATAGGAGAGCAAGATAACAGAAACTGCTGCATTTGTATTGTTCATGGTTAGGTCCCAACTGAAAGATGCAATTCGG GAAGGGGGAATTCCATTCAACAGGGCTCACGGTACACATGCCTTTGAGTATCCAAGCTTGGACTCTAGGTTCAATCGAGT TTTCAATGATGCAATGATCGATCACACCACTCTAGTTATGAAGAAGATTCTTAAACACTACAAAGGTTTTGAGGGCATAA AAAGGCTTGTGGATGTAGCTGGTGGCCATGGGATTAACTCGAACTTAATCGCTTCCAAATACCCTCATATTGAGGCTATC AATTTTGACTTGCCTCATGTCATACAACATGCCCCTCCCTATCCTGGTATATATATGACCTTTACTTTTGTTTTAAATGA ACTTGACTTCTAATCCTGCAAAAAGATAAAGATAAATTCAAGCCTCTAAGTAGATACTATCAGCTGTGCATTATTCATGT GTATCTATCTATGTTGAATACCAAAAGTAAAAGCTACGTAACGTTGCAGGAGTGGAGCACGTTGGAGGAGATATGTTTGA AAGTGTGCCTAAGGGAAATGCCATCTTTATGAAGGTGAGTGGTGGACTGGATAGGGTATTAGCTCTCTATTTTGTCTAGC TAGGGAAAATTTATTACAATGAGAGCTCTTTCATGTAGAGATTAGGTTTGGGCTTAACGTTCTTCCAATATACACTTTTG GCAGCGGTTAAAAACCTAAAATATATGTGGGATGAATGTGGAGAAAAATCATATATTACCTAATATTTTCATATCACAAT ATTTAAGTGTCACTAAAAAGTATGTCGGATGGATGTCAAGAAAAATCATATGTTATCAAACATTTTTAGTTTTGTTAGTA TAAACCAACCAGACTAGAAATTCGGACCATATGATACCTAACATTTTAGGTAACATATGGTTATACCTAACTATTATAGC ACCCTTCGAATGCTGACTATTTCAATAAAAAATGTTGAGTAAAATATAAAATTTCGCTTAAATGTATTGGAATTTTTGTT TGAAAACTGAAAATAAGAAATATTTTTAAAAAATGAAGTTTTTCTTTTCTATAAAAACTAAAAACTATATTACAAAACAA TAATCAAACATGCAATTATCATTTTCTTCTAAATAATATCAATTTGCAGTGGATACTTCATAATTGGAGTGATGACACTA CAAAAAAAACGTTATTTAGTGGGGGTTATTTAGCGGGGGTTTGGATAACGCCCGCAAATGTGGATAATTTTTAATAGTTA AGGGGGGTTTTAATAACCCCCGCAAATGTTTTATTAATTAACCCTCTCACTCTCGCACTCTCACTTCTCAGTCTCGTTCT CGATCTCGTTCTCAGTCTCGTTCGCCATGGAAGCTCACGATTTCAAGCGATTTCCACCGATTTGATCTCGTTTTCCACCG ATTTCCACCGATTTCAACCTCCACAGATTTCAACCACCGCACGCCACCGTAGCAACAACCTCCTCCGCCGTCGGTATGAC CTCTTTTTCCACCGATTTGATCTCGTTTTTCACCTTTGCTTTTCTTTGCTTTAAAAGCTGACTAACTGTTTCTTCTTCTT CATTCGCAGTTCTCTCTGCGATTTTCTCATGGATCCATCGCTCAGAGACTCAACAACTTCTACTCCGTCGCATGCTGCAT TCTCTGGTACTGATTTTTTCTTAATTAACCTTTTCAGATTTCTAAATTAGGTTTTCATTAGTTGATTTGGGAAATTGGGT CTGGTTTGGTCTTCAAAATGCTGGTTTGCAAGTCAGATTAAGTGGGTAGTTGTTACTAGTTTGAGGAGTTTGTTCCTCTT GAGTTTGTTTCCCTAGTGTGTTTGCCAATTGTTATCTGGTTCTTTCTTTTTGCCAAAACAGTAAGATGAACAGATTTTTA CACTGTGAGAATGTAACATTCTGTTTGATTATCTCCTTTTTATGCTATCAACAGTGTATTTTGTAGCAGATGACCCTAAC ATTCAAACCTGGATGATTTCTATCAATCTTTCAACCAATTAAACATGAACATCATATATATCTGAATAATTAAAATGAGA TATGGTATATATCAGCAAACCTACATTAACCAAAGTGTATTGAGCCATTATAGGAAGACAATTCTCTTTACCCATCCCAT TCTAATGTAGATGATACTTTGAACTTTCAAGGTAACAATGTGTCATTGAACAACAATGTATATCTTGGATGAATCAAAAT GACAGAAAAGAGCAAATCAATATATATCACTAAACTATAAGCTGATAGTTAATTATTCACCTTGATTACCAAAGTAAAGC TCTGTGTTGCTGTTCTGTGCTCAGTTTTCTTTGATTCGTTACTGCATTGCAATGTGTCTTTAATCATTTTCGTAATTTCT TGCTTGCTGCGATTTAGATGAAATTGGAATATCAATGTGAATGTATTGATTAAGATTTTGTGTGTGATTTACCGTAATCT GCTTTGTTCTGTTTGGTTTTGGCCAAGTAGCGATGCAAGCAATTGAGGTGAAGAATCATTCAACGCTGAATGGAAAAGTA ATAAGGGTCTTGTGGTCGCGTCGTGATCCTGATATTAGGAAGAATTGCATTGGGAATGTTTTTGTTAAGGTATATAGTGC TAACTAGCTACATTGCTTTGATTTGAGATATTGGTGAACCAATAGTGTAGTGTGGTTCATTGTTGTTACTGGAAGGGGAT TCTTATTGTGTTGAGTTTCTGGTGTGTGTATTGTGGCAGAACTTGGCAGAATCAGTGGATAGTGCTGGACTGGAAGAAAT CTTTAAGAAATATGGGAATATTTTAGTTGTCATGGCTGATGATGGGAAGAGCAAAGGATATGGGTTTGCTCAATTTGAAT CAGAGGAGTCTGCAAATGCTGCCATTGAGAAGCTCAATGGCTCTACTATCAATGATAAGCATATGCATGTGAGAATATTC TGCATTGGTTCTTAGTAATATGTTGAACATTTTCATTGTTTCTTTGATTTTCAAGCCTATAGTTGGTTGTTGTCTTCAAT TTCTGTATGCCTGTTATTTTCTGAGATCAATTTTGATATATATGATTGATTGATTCTTGTCACAGATATGTTGGGAGGTT TGTGAAAAAAAGTGAGCGCATTTTGCCTGGCCCTGATGCCAGATATACTAATTTGTACATGAAGAGTTTAGACCTAGATA TTACAGAAGCACTTCTGAAGGAAAAGTTTTCCTCTTTTGGGAAAATCGTTAGCTTGACTATTTCAAAGGATGAAAATGGG ATGTCAAAGGGCTTTGGCTTTGTGAACTATGAAAACTCAGATGATGCTAAAAGGGCCTTGGAAGCGATGAACGGAACACA ACTAGGTAGTTTTTTTTTTGCATCCTTTTACTGTGCTGGTTTTCTGCAGGCATAGTTGACATTTCTTGATGGTACATGAC ATGGTTTTGATTTGTCTTAAACAGGTTCGAAGATAACTTGTTTGCCATTCTCTCCTATTTTTAACTAGCCATTATGTTTT CAGTTGTCTTGAATGCTATGTTTTAACTTCCAGGGATCAAACATTTATGTGAAGAACATTGATGACAATGTAAGTGATGA AGAACTGCGGGGCCATTTTAGTGCATGTGGCTCTATAACTTATGCAAAAGTTATGAAGGACGAGAAAGGGATAAGCAAAG GGTTTGGTTTTGTCTGTTTCTCTACTCCTGAGGAGGCCAACAAAGCTGTGAACACTTTTCAATGTAAGTAAGTTCAGTTG TGTTTGGGACATGATATATGCTTCAGTGTAGTACTTTAGCAGTAATACAAAAACAGGAATATAATTGCTTGCTATAAGTT CATAAGAAAAAGAATGTAAGACTTCAGTGATATATTTATTGTGTTACTGCAATTTTACAAATTCATTGCATTGATCCTTC CCTGTGAATGTTCAACTTGCAGCATGAATCCTGGTTTTTCTCAGATCACTTTTTTGGACGCTTAGAAATTCATTTCAATA TCACTTATTTGGCACAAAGAAGTGTGGCGTATTTGTTAATTTATCACATAAGTTCATTTCAATATCACTTTCTTGTACCC TTAAAAATTCATTTCAATATCATTTATTTGCCACAAAGATCATAGCAAGTAAGGTAAAATTGTTTATAATCATCACCAGA AGCACATTTGGCCATTTTTGTGCTTCCTTGGTTCACTAGCTTCTTGTCATCAGAATGATTTGCTAATGATTATCATTGTT CGTTCTCCTTTTGTGTGTGTGTGTTTGGTATTATTTAGAGGTCATACGGTCATACCTCTAACTTTGAGTGAACATTGTCC TTGACTGAGATGATTTTACTGGTTGAGTTCATACTTTATATATTTAACTGAGCCTTAAGTGTATATATTTAACTGCCAGG AGATGCTACTATATAATCTCTTGCTAGCTGATATTATCCTCTTTGAGCCTTTGTTGAAGTTTCTCAACTGTTTTGCTTCT TTGTCAGGGATTTGTTGAGTTGAAGGGAATGGCTGATCGTATTATCAGTATGCGCCAACAACTTTTTGATGCTTTACGTT CCAGAAGTCTGCCTCTACTGAATTTCCTTTGCAATTTATTCTGCTTGTATTTGTCTGTATGGTCCTGTATCACTATTGTT TCACCAAATACCAGACTTTTTTGTTTACTCATTCTTTACTTCTGAAAAAATGAAGACTAGTTATGATAGTTAGGATGTTT AGGAAGCCTCTTTAAATGATTAATAAGTAAATGCAACAATTAAATGAGGTTAAAAATGTCCCTAGAATAAACTCTAGTAG CCAAGGGAGGTTTAAGGATGTTTAAAGCTGTAAATAATCTCTTGCATTTAAGGGAGGTTGAAAACTCCTGTTAAAAAAGC TTGCGGATAAGGGAGGTTTGAAACCCCCGCTAAAAACCGCCGCTAAATCCATATGCAAGTACCAGGGTTTGCTGAAAAAC GCCGCTAATGATTTGTGGGGAGTCTAACTTCGGGATTTTTCAAAACCCCCGCTAAGTAACTCGCGGGGGTTGAAAACCCC CGCTAAATGCAAAAAAAAACCCCACTAAATAACGTTTTTTTTGTAGTGTGAGCTATGCTTGAAGCTCTTGAAGAATTGCT ATAGTGCCATTCCTGATGATGGGAAGGTGATTGTTGTGGAGTCATTTCTTCCATTTGTACCTGAGAATAATCATGTTTGG AAGTCTGTATCTACATTAGATGTTCTGATGATGACTCAATTCTCCGAAGGGAAAGAGCGAACTGAGCAACAGTTCTTGGA ATTGGCAACTGCTACTGGATTTAGTGGCGTTAGATATGAATGTCATGTTTATACCTACTGGGTTATGGAGTTCTTCAAGT AGATATACGTAGAATTATTTATCTGTTTCAGAATTATTGTCCTAAATTAAGAGTATCATGTTTTGAATTATTTATGTTTT TATAATGAAAGATGAATTATATATCTTCGAGCAAATCTTCCCCAAAGGTCCATTTGGCGTGATTGTGAGTTTTTTTTTTT TTTTGTTTTTTTCAAATGTACATT
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0187000.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCGAACATTGGCAATTCACGAGAGGAATCAGAAGATGAAGAAGGCTTCTCGTATGCTATGCACCTTGTCAACTATAC TGTGTTTCCCCTGTCATTACAAACCGCCACTGAACTTGGAGTATTTGACGTGTTGCAAAAAGCAGGTCCAAATGCTAAGC TCTCTGCTAAGCAGATTGCGTCCCAGCTTTCGTGCAACAAGAATCCAGCAGCGCCTTCAATGCTAGATCGCATCCTCGCC CTTCTTGCTTCGAACTCTGTTCTTAAATGCTCTGTCTCTGTCCTTCAAGATGATGAACAAAACCTTGAAGCCTTTCAGAG ACTCTACACCATCACTCCTGTAGCCTCATTGTTTGCTCGCAATTCTGATGGTGTTTCCTTAGGGCCATTGATGGCCTTAA GTCATGACAAGGTCTTCCAAGCTAGCTGGTCCCAACTGAAAGATGCAATTCGGGAAGGGGGAATTCCATTCAACAGGGCT CACGGTACACATGCCTTTGAGTATCCAAGCTTGGACTCTAGGTTCAATCGAGTTTTCAATGATGCAATGATCGATCACAC CACTCTAGTTATGAAGAAGATTCTTAAACACTACAAAGGTTTTGAGGGCATAAAAAGGCTTGTGGATGTAGCTGGTGGCC ATGGGATTAACTCGAACTTAATCGCTTCCAAATACCCTCATATTGAGGCTATCAATTTTGACTTGCCTCATGTCATACAA CATGCCCCTCCCTATCCTGGAGTGGAGCACGTTGGAGGAGATATGTTTGAAAGTGTGCCTAAGGGAAATGCCATCTTTAT GAAGTCTCGTTCGCCATGGAAGCTCACGATTTCAAGCGATTTCCACCGATTTGATCTCGTTTTCCACCGATTTCCACCGA TTTCAACCTCCACAGATTTCAACCACCGCACGCCACCGTAG
Download CDS Sequence

Protein sequence (LotjaGi3g1v0187000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MANIGNSREESEDEEGFSYAMHLVNYTVFPLSLQTATELGVFDVLQKAGPNAKLSAKQIASQLSCNKNPAAPSMLDRILA LLASNSVLKCSVSVLQDDEQNLEAFQRLYTITPVASLFARNSDGVSLGPLMALSHDKVFQASWSQLKDAIREGGIPFNRA HGTHAFEYPSLDSRFNRVFNDAMIDHTTLVMKKILKHYKGFEGIKRLVDVAGGHGINSNLIASKYPHIEAINFDLPHVIQ HAPPYPGVEHVGGDMFESVPKGNAIFMKSRSPWKLTISSDFHRFDLVFHRFPPISTSTDFNHRTPP
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PIRSF
PIRSF005739
1 274 274 5.3E-90
IPR016461
Gene3D
G3DSA:1.10.10.10
2 117 116 1.4E-34
IPR036388
PANTHER
PTHR11746:SF215
9 269 261 9.2E-115 –
PANTHER
PTHR11746
9 269 261 9.2E-115 –
SUPERFAMILY
SSF46785
11 121 111 6.53E-24
IPR036390
ProSiteProfiles
PS51683
21 306 286 41.183
IPR016461
Pfam
PF08100
32 83 52 1.9E-16
IPR012967
Gene3D
G3DSA:3.40.50.150
119 293 175 1.4E-47 –
SUPERFAMILY
SSF53335
123 268 146 5.4E-37
IPR029063
Pfam
PF00891
143 269 127 1.9E-41
IPR001077

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0008171
Molecular function O-methyltransferase activity Catalysis of the transfer of a methyl group to the oxygen atom of an acceptor molecule.
Subterm of
GO:0046983
Molecular function Protein dimerization activity The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0187000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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