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LotjaGi3g1v0187000.4

Overview

Field Value
Gene ID LotjaGi3g1v0187000
Transcript ID LotjaGi3g1v0187000.4
Related isoforms 4
Lotus japonicus genome version Gifu v1.2
Description Caffeic O-methyltransferase; TAIR: AT5G54160.1 O-methyltransferase 1; Swiss-Prot: sp|Q00763|COMT1_POPTM Caffeic acid 3-O-methyltransferase 1; TrEMBL-Plants: tr|I1NCR8|I1NCR8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0187000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:26306595..26312889) extracted from Lotus japonicus Gifu genome v1.2.

TTTCATTTCAAGTCCAGAAAATGGCGAACATTGGCAATTCACGAGAGGAATCAGAAGATGAAGAAGGCTTCTCGTATGCT ATGCACCTTGTCAACTATACTGTGTTTCCCCTGTCATTACAAACCGCCACTGAACTTGGAGTATTTGACGTGTTGCAAAA AGCAGGTCCAAATGCTAAGCTCTCTGCTAAGCAGATTGCGTCCCAGCTTTCGTGCAACAAGAATCCAGCAGCGCCTTCAA TGCTAGATCGCATCCTCGCCCTTCTTGCTTCGAACTCTGTTCTTAAATGCTCTGTCTCTGTCCTTCAAGATGATGAACAA AACCTTGAAGCCTTTCAGAGACTCTACACCATCACTCCTGTAGCCTCATTGTTTGCTCGCAATTCTGATGGTGTTTCCTT AGGGCCATTGATGGCCTTAAGTCATGACAAGGTCTTCCAAGCTAGCTGGTATGTTCCTCCCAAGAAAAAGAAAAAAAACT AATTCACAATTTAAGAATATAGTTAAAGTAGATAAGTGCATTAAATTTGTTCTCAATTAATATTGCCCTTTACTCACTTT TCTTGATTTTTATAGGATTAATGATCAAATTAGTCTCTGGGTTTGTAAACGAGTTTGATTTTAGTCCTTTTAGGAAAAAA ACCATATTTAATGGCAGTCCTTTTTTCGAATATGTACATACTAGTAGTTTTTACCGTCACTAAACGTCATTTTTCTTCAG AGGAACTAAAATCATACTCGCTTACAAACTAAGGACTAATATGACCATTAACTCGTTTTTATACATCATTAATGCTTAGA AAAGCATAAAGAGAGAAAAAGTTCAATTAGATAAAGGGTATTCTTGTCAAAAATTAATTAATGCACCATAAACTTCAAGT TGATTCTTCTAAGAAGAACCAAGATAAAACATCTTATTTGATTCATATATATATATATATATATATATATATATATATAT ATATATATATATATATATATATATATATATATATATATATATAAATAGGGCCAGAAGTAGTATTACTTTTCTTATTAATA GAAATACATGTGAGTCTCATTAAATTAAGAGTCCAACCCATATAATTCAATGAATCCACATAAATTTAACTAACAAAAGA AATATTGCTCGAAAAAGAATACAAAATGAGTGTTGATACTTGATAGTCTTTCTCATACCTTTAATTTTTAAAAGCATGAC AAGAGCTAGTTTTTCAATACAGAAGTTTCTTTGTATATATATACACTATGAATAGGAGAGCAAGATAACAGAAACTGCTG CATTTGTATTGTTCATGGTTAGGTCCCAACTGAAAGATGCAATTCGGGAAGGGGGAATTCCATTCAACAGGGCTCACGGT ACACATGCCTTTGAGTATCCAAGCTTGGACTCTAGGTTCAATCGAGTTTTCAATGATGCAATGATCGATCACACCACTCT AGTTATGAAGAAGATTCTTAAACACTACAAAGGTTTTGAGGGCATAAAAAGGCTTGTGGATGTAGCTGGTGGCCATGGGA TTAACTCGAACTTAATCGCTTCCAAATACCCTCATATTGAGGCTATCAATTTTGACTTGCCTCATGTCATACAACATGCC CCTCCCTATCCTGGTATATATATGACCTTTACTTTTGTTTTAAATGAACTTGACTTCTAATCCTGCAAAAAGATAAAGAT AAATTCAAGCCTCTAAGTAGATACTATCAGCTGTGCATTATTCATGTGTATCTATCTATGTTGAATACCAAAAGTAAAAG CTACGTAACGTTGCAGGAGTGGAGCACGTTGGAGGAGATATGTTTGAAAGTGTGCCTAAGGGAAATGCCATCTTTATGAA GGTGAGTGGTGGACTGGATAGGGTATTAGCTCTCTATTTTGTCTAGCTAGGGAAAATTTATTACAATGAGAGCTCTTTCA TGTAGAGATTAGGTTTGGGCTTAACGTTCTTCCAATATACACTTTTGGCAGCGGTTAAAAACCTAAAATATATGTGGGAT GAATGTGGAGAAAAATCATATATTACCTAATATTTTCATATCACAATATTTAAGTGTCACTAAAAAGTATGTCGGATGGA TGTCAAGAAAAATCATATGTTATCAAACATTTTTAGTTTTGTTAGTATAAACCAACCAGACTAGAAATTCGGACCATATG ATACCTAACATTTTAGGTAACATATGGTTATACCTAACTATTATAGCACCCTTCGAATGCTGACTATTTCAATAAAAAAT GTTGAGTAAAATATAAAATTTCGCTTAAATGTATTGGAATTTTTGTTTGAAAACTGAAAATAAGAAATATTTTTAAAAAA TGAAGTTTTTCTTTTCTATAAAAACTAAAAACTATATTACAAAACAATAATCAAACATGCAATTATCATTTTCTTCTAAA TAATATCAATTTGCAGTGGATACTTCATAATTGGAGTGATGACACTACAAAAAAAACGTTATTTAGTGGGGGTTATTTAG CGGGGGTTTGGATAACGCCCGCAAATGTGGATAATTTTTAATAGTTAAGGGGGGTTTTAATAACCCCCGCAAATGTTTTA TTAATTAACCCTCTCACTCTCGCACTCTCACTTCTCAGTCTCGTTCTCGATCTCGTTCTCAGTCTCGTTCGCCATGGAAG CTCACGATTTCAAGCGATTTCCACCGATTTGATCTCGTTTTCCACCGATTTCCACCGATTTCAACCTCCACAGATTTCAA CCACCGCACGCCACCGTAGCAACAACCTCCTCCGCCGTCGGTATGACCTCTTTTTCCACCGATTTGATCTCGTTTTTCAC CTTTGCTTTTCTTTGCTTTAAAAGCTGACTAACTGTTTCTTCTTCTTCATTCGCAGTTCTCTCTGCGATTTTCTCATGGA TCCATCGCTCAGAGACTCAACAACTTCTACTCCGTCGCATGCTGCATTCTCTGGTACTGATTTTTTCTTAATTAACCTTT TCAGATTTCTAAATTAGGTTTTCATTAGTTGATTTGGGAAATTGGGTCTGGTTTGGTCTTCAAAATGCTGGTTTGCAAGT CAGATTAAGTGGGTAGTTGTTACTAGTTTGAGGAGTTTGTTCCTCTTGAGTTTGTTTCCCTAGTGTGTTTGCCAATTGTT ATCTGGTTCTTTCTTTTTGCCAAAACAGTAAGATGAACAGATTTTTACACTGTGAGAATGTAACATTCTGTTTGATTATC TCCTTTTTATGCTATCAACAGTGTATTTTGTAGCAGATGACCCTAACATTCAAACCTGGATGATTTCTATCAATCTTTCA ACCAATTAAACATGAACATCATATATATCTGAATAATTAAAATGAGATATGGTATATATCAGCAAACCTACATTAACCAA AGTGTATTGAGCCATTATAGGAAGACAATTCTCTTTACCCATCCCATTCTAATGTAGATGATACTTTGAACTTTCAAGGT AACAATGTGTCATTGAACAACAATGTATATCTTGGATGAATCAAAATGACAGAAAAGAGCAAATCAATATATATCACTAA ACTATAAGCTGATAGTTAATTATTCACCTTGATTACCAAAGTAAAGCTCTGTGTTGCTGTTCTGTGCTCAGTTTTCTTTG ATTCGTTACTGCATTGCAATGTGTCTTTAATCATTTTCGTAATTTCTTGCTTGCTGCGATTTAGATGAAATTGGAATATC AATGTGAATGTATTGATTAAGATTTTGTGTGTGATTTACCGTAATCTGCTTTGTTCTGTTTGGTTTTGGCCAAGTAGCGA TGCAAGCAATTGAGGTGAAGAATCATTCAACGCTGAATGGAAAAGTAATAAGGGTCTTGTGGTCGCGTCGTGATCCTGAT ATTAGGAAGAATTGCATTGGGAATGTTTTTGTTAAGGTATATAGTGCTAACTAGCTACATTGCTTTGATTTGAGATATTG GTGAACCAATAGTGTAGTGTGGTTCATTGTTGTTACTGGAAGGGGATTCTTATTGTGTTGAGTTTCTGGTGTGTGTATTG TGGCAGAACTTGGCAGAATCAGTGGATAGTGCTGGACTGGAAGAAATCTTTAAGAAATATGGGAATATTTTAGTTGTCAT GGCTGATGATGGGAAGAGCAAAGGATATGGGTTTGCTCAATTTGAATCAGAGGAGTCTGCAAATGCTGCCATTGAGAAGC TCAATGGCTCTACTATCAATGATAAGCATATGCATGTGAGAATATTCTGCATTGGTTCTTAGTAATATGTTGAACATTTT CATTGTTTCTTTGATTTTCAAGCCTATAGTTGGTTGTTGTCTTCAATTTCTGTATGCCTGTTATTTTCTGAGATCAATTT TGATATATATGATTGATTGATTCTTGTCACAGATATGTTGGGAGGTTTGTGAAAAAAAGTGAGCGCATTTTGCCTGGCCC TGATGCCAGATATACTAATTTGTACATGAAGAGTTTAGACCTAGATATTACAGAAGCACTTCTGAAGGAAAAGTTTTCCT CTTTTGGGAAAATCGTTAGCTTGACTATTTCAAAGGATGAAAATGGGATGTCAAAGGGCTTTGGCTTTGTGAACTATGAA AACTCAGATGATGCTAAAAGGGCCTTGGAAGCGATGAACGGAACACAACTAGGTAGTTTTTTTTTTGCATCCTTTTACTG TGCTGGTTTTCTGCAGGCATAGTTGACATTTCTTGATGGTACATGACATGGTTTTGATTTGTCTTAAACAGGTTCGAAGA TAACTTGTTTGCCATTCTCTCCTATTTTTAACTAGCCATTATGTTTTCAGTTGTCTTGAATGCTATGTTTTAACTTCCAG GGATCAAACATTTATGTGAAGAACATTGATGACAATGTAAGTGATGAAGAACTGCGGGGCCATTTTAGTGCATGTGGCTC TATAACTTATGCAAAAGTTATGAAGGACGAGAAAGGGATAAGCAAAGGGTTTGGTTTTGTCTGTTTCTCTACTCCTGAGG AGGCCAACAAAGCTGTGAACACTTTTCAATGTAAGTAAGTTCAGTTGTGTTTGGGACATGATATATGCTTCAGTGTAGTA CTTTAGCAGTAATACAAAAACAGGAATATAATTGCTTGCTATAAGTTCATAAGAAAAAGAATGTAAGACTTCAGTGATAT ATTTATTGTGTTACTGCAATTTTACAAATTCATTGCATTGATCCTTCCCTGTGAATGTTCAACTTGCAGCATGAATCCTG GTTTTTCTCAGATCACTTTTTTGGACGCTTAGAAATTCATTTCAATATCACTTATTTGGCACAAAGAAGTGTGGCGTATT TGTTAATTTATCACATAAGTTCATTTCAATATCACTTTCTTGTACCCTTAAAAATTCATTTCAATATCATTTATTTGCCA CAAAGATCATAGCAAGTAAGGTAAAATTGTTTATAATCATCACCAGAAGCACATTTGGCCATTTTTGTGCTTCCTTGGTT CACTAGCTTCTTGTCATCAGAATGATTTGCTAATGATTATCATTGTTCGTTCTCCTTTTGTGTGTGTGTGTTTGGTATTA TTTAGAGGTCATACGGTCATACCTCTAACTTTGAGTGAACATTGTCCTTGACTGAGATGATTTTACTGGTTGAGTTCATA CTTTATATATTTAACTGAGCCTTAAGTGTATATATTTAACTGCCAGGAGATGCTACTATATAATCTCTTGCTAGCTGATA TTATCCTCTTTGAGCCTTTGTTGAAGTTTCTCAACTGTTTTGCTTCTTTGTCAGGGATTTGTTGAGTTGAAGGGAATGGC TGATCGTATTATCAGTATGCGCCAACAACTTTTTGATGCTTTACGTTCCAGAAGTCTGCCTCTACTGAATTTCCTTTGCA ATTTATTCTGCTTGTATTTGTCTGTATGGTCCTGTATCACTATTGTTTCACCAAATACCAGACTTTTTTGTTTACTCATT CTTTACTTCTGAAAAAATGAAGACTAGTTATGATAGTTAGGATGTTTAGGAAGCCTCTTTAAATGATTAATAAGTAAATG CAACAATTAAATGAGGTTAAAAATGTCCCTAGAATAAACTCTAGTAGCCAAGGGAGGTTTAAGGATGTTTAAAGCTGTAA ATAATCTCTTGCATTTAAGGGAGGTTGAAAACTCCTGTTAAAAAAGCTTGCGGATAAGGGAGGTTTGAAACCCCCGCTAA AAACCGCCGCTAAATCCATATGCAAGTACCAGGGTTTGCTGAAAAACGCCGCTAATGATTTGTGGGGAGTCTAACTTCGG GATTTTTCAAAACCCCCGCTAAGTAACTCGCGGGGGTTGAAAACCCCCGCTAAAT
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0187000.4) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCGAACATTGGCAATTCACGAGAGGAATCAGAAGATGAAGAAGGCTTCTCGTATGCTATGCACCTTGTCAACTATAC TGTGTTTCCCCTGTCATTACAAACCGCCACTGAACTTGGAGTATTTGACGTGTTGCAAAAAGCAGGTCCAAATGCTAAGC TCTCTGCTAAGCAGATTGCGTCCCAGCTTTCGTGCAACAAGAATCCAGCAGCGCCTTCAATGCTAGATCGCATCCTCGCC CTTCTTGCTTCGAACTCTGTTCTTAAATGCTCTGTCTCTGTCCTTCAAGATGATGAACAAAACCTTGAAGCCTTTCAGAG ACTCTACACCATCACTCCTGTAGCCTCATTGTTTGCTCGCAATTCTGATGGTGTTTCCTTAGGGCCATTGATGGCCTTAA GTCATGACAAGGTCTTCCAAGCTAGCTGGTCCCAACTGAAAGATGCAATTCGGGAAGGGGGAATTCCATTCAACAGGGCT CACGGTACACATGCCTTTGAGTATCCAAGCTTGGACTCTAGGTTCAATCGAGTTTTCAATGATGCAATGATCGATCACAC CACTCTAGTTATGAAGAAGATTCTTAAACACTACAAAGGTTTTGAGGGCATAAAAAGGCTTGTGGATGTAGCTGGTGGCC ATGGGATTAACTCGAACTTAATCGCTTCCAAATACCCTCATATTGAGGCTATCAATTTTGACTTGCCTCATGTCATACAA CATGCCCCTCCCTATCCTGGAGTGGAGCACGTTGGAGGAGATATGTTTGAAAGTGTGCCTAAGGGAAATGCCATCTTTAT GAAGTCTCGTTCTCGATCTCGTTCTCAGTCTCGTTCGCCATGGAAGCTCACGATTTCAAGCGATTTCCACCGATTTGATC TCGTTTTCCACCGATTTCCACCGATTTCAACCTCCACAGATTTCAACCACCGCACGCCACCGTAG
Download CDS Sequence

Protein sequence (LotjaGi3g1v0187000.4) extracted from Lotus japonicus Gifu v1.2 Proteins.

MANIGNSREESEDEEGFSYAMHLVNYTVFPLSLQTATELGVFDVLQKAGPNAKLSAKQIASQLSCNKNPAAPSMLDRILA LLASNSVLKCSVSVLQDDEQNLEAFQRLYTITPVASLFARNSDGVSLGPLMALSHDKVFQASWSQLKDAIREGGIPFNRA HGTHAFEYPSLDSRFNRVFNDAMIDHTTLVMKKILKHYKGFEGIKRLVDVAGGHGINSNLIASKYPHIEAINFDLPHVIQ HAPPYPGVEHVGGDMFESVPKGNAIFMKSRSRSRSQSRSPWKLTISSDFHRFDLVFHRFPPISTSTDFNHRTPP
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PIRSF
PIRSF005739
1 279 279 4.5E-90
IPR016461
Gene3D
G3DSA:1.10.10.10
2 117 116 1.5E-34
IPR036388
PANTHER
PTHR11746
9 275 267 4.4E-115 –
PANTHER
PTHR11746:SF215
9 275 267 4.4E-115 –
SUPERFAMILY
SSF46785
11 121 111 7.07E-24
IPR036390
ProSiteProfiles
PS51683
21 314 294 41.705
IPR016461
Pfam
PF08100
32 83 52 1.9E-16
IPR012967
Gene3D
G3DSA:3.40.50.150
119 301 183 1.6E-47 –
SUPERFAMILY
SSF53335
123 268 146 7.25E-37
IPR029063
Pfam
PF00891
143 269 127 1.9E-41
IPR001077

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0008171
Molecular function O-methyltransferase activity Catalysis of the transfer of a methyl group to the oxygen atom of an acceptor molecule.
Subterm of
GO:0046983
Molecular function Protein dimerization activity The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0187000.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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