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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0188300 |
| Transcript ID | LotjaGi3g1v0188300.1 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Hexosyltransferase; TAIR: AT1G05170.2 Galactosyltransferase family protein; Swiss-Prot: sp|A8MRC7|B3GT2_ARATH Probable beta-1,3-galactosyltransferase 2; TrEMBL-Plants: tr|A0A151RMU0|A0A151RMU0_CAJCA Hexosyltransferase; Found in the gene: LotjaGi3g1v0188300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:26856734..26861887) extracted from Lotus japonicus Gifu genome v1.2.
GCAAGTCTCACCTCACTTGTATTGTGTTCAACGTCCCTTACCTGCAAAGACATAGAGAGAGAGAGAGAGAATAAGAGAGA GAGCACAAAGCAAAGCATAGCGTAGCAGAGGAAAAAGAAGAGAACAAACAAGTCAAAAGGAAACAAAACAGAGCATCTCT CTGTTCTCATTCTTTCTCTATCTCCAAATTCTTCTTCTTTTCAAAGGTGCCCAGTTTCACAGTTGCTTCCTTTCCAGCAT CATCTCATGCTTCTAGCTCATCTGGTTATGAGTTTCCTTGGTTTGGTTCTGGAAACGTGTTTTTGAACATGGGTTTTGAC TTCTGAGTGTGAAGTTGAATGCTTGAAAAATATACAAGTTAGTACAAAGCAATGACTTGGAAAAGCAGAGGAGAGTTGCT TCACAGAAGCACCATGACAAAGAAATGTGTGATTTTCCTCTGTATTGGAAGCTTCTGTGCTGGGATGTTCTTCACCAATA GGTACATAACTTTTATGATTTGTCATGTTTCCTATTGTTTTCCTTATTCTTGATTGATAATTACTTCTTTAGAGCTTTCA TGATTCTGTTCAATAGTTTCTGTAAACAAGTTTGTTCTGATTTTTCAGATCTTCATAATGTTTTTGAGTAAAAATAACCA AGTAGTCAGAGCTGGTTGTGTGTGAATTCTTTGAATTCTGATTGTATCTGAAGAAATTCCATGAATTTGATTTTGTGAAG ATGTTTCAATTCTTATTAAATTCAGTTCTTGAAGTTTACAAATAGAAGCTTTTCTAGTGGATTATATTTGTCTCATCTAT CTTATGTTCATCAAAACTCATAGCAGAAGTGGAATGGATCTGAATCAGTTGCTCTGTTTGATTGACTTGACTCCTATTGA CAAGTCAATTCTAGTTTAACACTCTGTCAGCTCAATCAATATCTACCAATTTTGTGAACTATTAATTGAATTCCTGCTTC AAATTTCTTTATTGAGTTTATTTGAATAATGTTTTTTTGAGTTTATAAAATTCCTGCACATGCCTTATAATCAATTGTGA AGAAGACCTCTGACATCTAATAACTAATCGCCACTCTTATTCTATGTTAGTTGCAACTGAAGCACTTATTTATATTTACA AGTTGTTGAAAAGTCGAAATGTGATGTTATTTTGGGATCTACCTTGTTATTACTTATAAAATAGTGATAGTCTAACAAAT TTTGATTTTGTTTCAAATTTTATTTTTCTCATCATAATTAATAAACGCAGGATGTTTGATCCATGAAAGTGTTATAACTT AATAATTTTTTTTGCTCCATGAAAGTGTTATAAATAATTTTCTTTCTTTCTTTCTTACAACTTTAAATATTTAATTGCTC TCAGATTGACAGATTCTGATTTCAAGGATGTTTGTGAACTCACTGTGAAACTTGATTTCAATGGCAACTTGTGAGATAGT TACTGTGGTGCTTTTCTAATGAGAAATTTAAATGTGTAAACAGGATGTGGACTATTCCTGAACCTAAAGGGCTTGCAAGG ACAACAGCTACTGAAGCTGAAAAACTAAATCTAGTTTCTGAGGGTTGTAATTCCAGAATTGTAAGCACTGTTACCTTTCT AATTTTAGTCTTTGATCATGTGCTAGTTATCAATGAAAGTTTGTTTTGAATTCAATGTTTCATTCTATAATGTATAGCAT GTTTGGAAAACCTTCTTTCTAAATTCAAAATCAATTTTAAGGAGAAGCTTCTGTGTATAACTTCTGGGTGACAAAATTCA TTCTGAGGAAAAAGAAGCAGATCCAAATTAACATGCTTCACATCATATGATTTTTTCTAAGTTAGTGTATTGTTTCTCTT AGTTGCAAGAGAAGGAGGTGAAGCGCGAAACCAAAGGCATCTTCAAGACAAGTAATGCCATACAGTAAGTTACTTATACC ATGATCCTATAGTGTATCTGCTTGTAAGTTATTGTTCATCGCAAAGACGCTTAACTGCATTGAATATAGAACCCTGGACA AGACTATTTCGAACTTGGAGATGGAGTTGGCGGCTGCAAAGGCAGCTCAGGAGTCTATAAGAAGTGGTGCTCCTGTATCA GAAGATATCAAGATGCCTGAATCATCTGGTAAACGAAGATACCTTATGGTCGTAGGAATAAACACTGCTTTCAGCAGCCG GAAAAGAAGAGACTCGGTTCGTCAAACATGGATGCCATCAGGTTCATAATTTTTTCCTTGCTTACTAATTGTGTTCTATC ATGCTTTGTTACATTTTTTTTCTGTTTACTATTGGCGATGGTTTCTGATGTTGAGTTTTGTGATAACATTGAAAACAGGT GAGAAAAGAAAGAAGCTAGAGGAAGAGAAGGGCATTGTCATCCGCTTTGTAATTGGTCATAGGTAAGTCTCGTCTTTCTT TCAGTGGTTTTATTATTACATAGTTGTCATGCAACTATATCTTGTTTTTATTTTAAATTTATGAATGAATTGTAAAATGA ACTTTTTTTTCACTCTTTTCTGCAGTGCAACATCAGGGGGTATCCTAGACAGAGCTATTGAAGCAGAAGATCAGAAGCAT GGAGATTTCCTAAGGCTGGTAATGGTCCTCTTTGTCTTATTGACGCTTCCGGCTCCCATGTCCCTTCTCTCATTTAGTCA TTTTGTTAAGACTTGCTACTTTTACTTGACAAGATAACATAACCAAATTTATTTGAAATGAAAAAAAATAAGGTTTTCAA ATCATTTTGTTTTGATTCTGCAGGATCACGTTGAAGGGTACCTTGAATTGTCAGCAAAGACAAAGATCTACTTTGCCACT GCTGTTAACTTGTGGGATGCTGAATTCTATATCAAAGTTGATGATGATGTTCATGTAAATATAGGTATGTAATTTTTTCA ATCTCATGATAATCTGACCTTGCATGAGGAGTTGGTGATTCAAACTTAAATTTTTCTGCTCTACATGGTCACTACATAAA TTCTCTTTCATATGCATCTTAGAACTCTACATATACTAGACATGGTTTATGTTTCTATATTCTGTATGAATCTTGAATTT TTTTTTTTATGGTAATATGTCTTATTATCCTATTCAATCTGTTTCCAGCTACACTTGGACAAACTTTAGTTAGACACAGA AGAAAACGGCGGGTTTACATTGGATGTATGAAATCTGGGCCTGTTCTTTCTCAAAAGTGAGAATTATTTTCTTTTATCCA TGTTCAATTTAATATAAGAGTTGTTAATTTGTAATACTTTTTCTGGCTTCTTACCTGCCATTCCCAATTTTCTTGCAGAG GGGTAAGGTACCATGAACCAGAATATTGGAAATTTGGCGAGAATGGAAACAGGTACTTCCGTCACGCCACGGGACAGTTG TATGCCATTTCAAAAGATCTTGCTAAATATATTTCACTTAACCAGTAAGTCCTTCATTGTCTCGCTTATGGGTGGAAATA GTAAACTGAAGTCAAATTTATGGACTTAATGCTGATGCATGATTTTCTGTCTCAGGAAGGTTCTTCACAAGTATGCCAAT GAGGATGTCTCACTAGGATCTTGGTTTATTGGACTTGATGTGGAGCACATAGATGATCGTAGACTCTGCTGTGGTACACC ACCAGGTGAAGATTTTTTCATTCATTTATAGATAATATTGTTAAGTTCCTACATTGACTCGAGAAATTGCCAAAATACTA AAGGATAGAGCAATCTTCACTCTTGAGCTAGCTTTTAGGTAGAGTTACGCCTAATCCAAATTCTAAAATGGTATCAGAGC CTATCAAATGTTCAATTCTGCGAACTTTGCGGCTCCAGATGTCTAGCTCTCGTCATGAAGGATGTGTTATGCCAAAGTAG TCCTTATAAAGGGTAGAAAGATCCTCACCCTGAGCTTGCTTTCGGTCTACAGTTAGATCTTAAACCCAAATTCTAAGAGA TATTGACCTCTGTGAATATACATGTTATCAAATCATTGTATATTTGGTTTGATTAAGGAATAATAAGTGGTCGACAGTTT CAGATTCTTGAACTTCTTGTTACTCTTGCAGATTGTGAATGGAAGGCCCAGGCAGGCAACGTTTGCGTTGCTTCGTTTGA TTGGACCTGCAGTGGAATTTGCAGGTCTGCTGAAAGGATCAAAGAGGTGCACAGGCGATGCGGCGAAGGTGAGAAAGCTT TGTGGAGTGCCACATTCTAGAAGGCACCTTGGAGAGCTCTTCCCCGCTCAGGAAGATTATAACTATAGCAATGAAACTAG GCTGCAGCATTTTCTTTTCTTTATATAGTTTTGATAAGTATAGAAAAATTTTCATTTTACACGAGAGCAGGAGTCAGAGA GAGTGCGAGAGGAAAGAAAGAGAAAGGACTTGCCCCATGGAACTTCTGCATTTTAATAAAGGAGATTAGCCATGGTAGCT ACCAGAATAGAAAGCATGGGATAGTCCCCACCAACCCATTCTTTGATGCTTGAAAGGCAACTCTATATGTTAATAGGTTC ATGCCTAACAAGCTCCTAATATATACAGATGTATACTTTGGTTGCTATTGCCACCTTTCCTGACATTTAAATCTGAATTT TCTGTTTGGCCAAGTTGAAATTATTCTGTCAGTGTTTGGATATCAATTGAGTGCAATATGAACAAACTTTCATCTCAATC GATAAGAAAAGTTCCTTCACTTTTTGTCTTGAAGTGAATGCTAAAATCTATATATATAATGCCAATAGGTATATCCAAAG ATAGCCTTCTACATTACATTATTATATAGTGCAGGTAATTCCCTAGGAAAAAATAAATCATATGAGTTCAGTTCAGCCTA CAAAGCAAGGTGAGTTATGACTTTTTTATTCAATATCCAATAAACTCCAAAGGCAATATACATCATCAAAAAGCAAGTGT TAATTTTTCGCCAAATGGCAAGTCTATACTTTGGACCTTATATCTGTTAGAGAAAGTAGGCATTTTCAATTAAGCCTGCT CCATGCAACAATGATATATACACACCTCATGTTTTAAACACTTCATTTCCACCTATTTTTATTTCTATCTCTCTGCTCTT AACATTTATCACATCTCATATTTTCTCTCTCTTATTTTTTCTTTTTTTCCTATCTCTCTCCTCCTCCACCTCTGTCCACC TCATTTTAGAGGTGTGAACATAACATTATTCCTG
CDS sequence (LotjaGi3g1v0188300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACTTGGAAAAGCAGAGGAGAGTTGCTTCACAGAAGCACCATGACAAAGAAATGTGTGATTTTCCTCTGTATTGGAAG CTTCTGTGCTGGGATGTTCTTCACCAATAGGATGTGGACTATTCCTGAACCTAAAGGGCTTGCAAGGACAACAGCTACTG AAGCTGAAAAACTAAATCTAGTTTCTGAGGGTTGTAATTCCAGAATTTTGCAAGAGAAGGAGGTGAAGCGCGAAACCAAA GGCATCTTCAAGACAAGTAATGCCATACAAACCCTGGACAAGACTATTTCGAACTTGGAGATGGAGTTGGCGGCTGCAAA GGCAGCTCAGGAGTCTATAAGAAGTGGTGCTCCTGTATCAGAAGATATCAAGATGCCTGAATCATCTGGTAAACGAAGAT ACCTTATGGTCGTAGGAATAAACACTGCTTTCAGCAGCCGGAAAAGAAGAGACTCGGTTCGTCAAACATGGATGCCATCA GGTGAGAAAAGAAAGAAGCTAGAGGAAGAGAAGGGCATTGTCATCCGCTTTGTAATTGGTCATAGTGCAACATCAGGGGG TATCCTAGACAGAGCTATTGAAGCAGAAGATCAGAAGCATGGAGATTTCCTAAGGCTGGATCACGTTGAAGGGTACCTTG AATTGTCAGCAAAGACAAAGATCTACTTTGCCACTGCTGTTAACTTGTGGGATGCTGAATTCTATATCAAAGTTGATGAT GATGTTCATGTAAATATAGCTACACTTGGACAAACTTTAGTTAGACACAGAAGAAAACGGCGGGTTTACATTGGATGTAT GAAATCTGGGCCTGTTCTTTCTCAAAAAGGGGTAAGGTACCATGAACCAGAATATTGGAAATTTGGCGAGAATGGAAACA GGTACTTCCGTCACGCCACGGGACAGTTGTATGCCATTTCAAAAGATCTTGCTAAATATATTTCACTTAACCAGAAGGTT CTTCACAAGTATGCCAATGAGGATGTCTCACTAGGATCTTGGTTTATTGGACTTGATGTGGAGCACATAGATGATCGTAG ACTCTGCTGTGGTACACCACCAGATTGTGAATGGAAGGCCCAGGCAGGCAACGTTTGCGTTGCTTCGTTTGATTGGACCT GCAGTGGAATTTGCAGGTCTGCTGAAAGGATCAAAGAGGTGCACAGGCGATGCGGCGAAGGTGAGAAAGCTTTGTGGAGT GCCACATTCTAG
Protein sequence (LotjaGi3g1v0188300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTWKSRGELLHRSTMTKKCVIFLCIGSFCAGMFFTNRMWTIPEPKGLARTTATEAEKLNLVSEGCNSRILQEKEVKRETK GIFKTSNAIQTLDKTISNLEMELAAAKAAQESIRSGAPVSEDIKMPESSGKRRYLMVVGINTAFSSRKRRDSVRQTWMPS GEKRKKLEEEKGIVIRFVIGHSATSGGILDRAIEAEDQKHGDFLRLDHVEGYLELSAKTKIYFATAVNLWDAEFYIKVDD DVHVNIATLGQTLVRHRRKRRVYIGCMKSGPVLSQKGVRYHEPEYWKFGENGNRYFRHATGQLYAISKDLAKYISLNQKV LHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPDCEWKAQAGNVCVASFDWTCSGICRSAERIKEVHRRCGEGEKALWS ATF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | - | – | |
| PANTHER | 7 | 394 | 388 | 3.7E-218 | – | |
| PANTHER | 7 | 394 | 388 | 3.7E-218 | ||
| Pfam | 17 | 108 | 92 | 1.8E-30 | ||
| TMHMM | 19 | 41 | 23 | - | – | |
| Phobius | 20 | 39 | 20 | - | – | |
| Phobius | 40 | 403 | 364 | - | – | |
| Coils | 89 | 109 | 21 | - | – | |
| Gene3D | 142 | 338 | 197 | 1.1E-6 | – | |
| Pfam | 148 | 345 | 198 | 5.1E-51 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Protein glycosylation | A protein modification process that results in the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid, e.g. the addition of glycan chains to proteins. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of LotjaGi3g1v0188300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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