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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0188800 |
| Transcript ID | LotjaGi3g1v0188800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | S-acyltransferase; TAIR: AT3G26935.1 DHHC-type zinc finger family protein; Swiss-Prot: sp|Q0WQK2|ZDHC9_ARATH Probable protein S-acyltransferase 7; TrEMBL-Plants: tr|B9IAF7|B9IAF7_POPTR S-acyltransferase; Found in the gene: LotjaGi3g1v0188800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:27089105..27091612) extracted from Lotus japonicus Gifu genome v1.2.
TTGCTACATTGGGTACAGTTTAAGTTTCGAAGATAACTTCATTGCTGTCTGTCATGGAAATGGAAAGGCAAATGGAAGCA ACCGAATTGGAAATAGAAGTGATGGAACCCATTGATTTATGTGGGGAAGTAGAAGAAGGTGGTGAAATATTTGAAAGAAA TGAAAGAGACAAAGCAACTGAAAAAAAGTTTGACTGTGGAAATCAGAGTCTGATGAGTGCTCTAAAGACAAAGTTGCTTA AAGTGAAGAGAAATTGTCATGATCAACTTCTTCAATGTGGTGTCATTGAGAAATTGGACACAACTAGAGTGTACCAAATT TGGCCAGGAAGAAATGTAAAGTTGCAATTTGCAAACTTTGTATGCTCTATGATGTTCGTCACATGAGTTATTTAGTTCCT AAAATTTGTGCACTTTGATGACGCAGGTCTTTTTCTTTCATGGAAGACTCATGTGTGGTCCTGATCCAAGAGGGTTTATT TTGACCACGGTTTCTATAATTCTTTCAAGTTGGATTTTTTCCAGATATGTTGGGAAAGATGTGCCACATCACTCAGCCAT CGTTGTTATGTTCGGTGTATTGTTGACATTAATTGTTGGTCCCTAAACCCATGTCATTATAAACCAATGTTTTACTAACT TTTTTGTGTTTGTGAAGAAGTATTTGGATTTCAAGTTGCAACAATGTTTGTCTTAGAATAAATTTTGATACCCCAGAAAT TACTCATATATACTTCTTTCTCAACATTGATTTTGGCTTTAGAATAATTGTAGAAGAATTTCCAATAGAGACCCTTGTGA TATGTTTTAAGTTTGATTGAAGCATTGATTATTGGTTAAAGTTATGCTTGTCATCACCACTTTTGCCAAATTGATGTAGG TGCTGGTCAACTTGATCCTCGTTAGCACAACCGATCCAGGAATTATTCCTAGGAGCGATCAAGAATGTCCTGAAGAGGCT GGTACTAGCAATGGAACCAAAAGCAAAAAGGTAGTCAATGGGGTGGAGATGAAATTGAAATACTGTCGAATTTGCAAGAT TTTTCGGCCACCCAGAAGTTGCCACTGTGCGATCTGTGACAATTGCATTGAGAGATACGATCATCACTGCCCTTGGATTG GTCAATGCATTGGATTGGTATGGCTAATCACACGAGAGTAAATGCTCAATTTGTAAGCCTCGAGCAAGTTAACTGTTAAC CTATAGAAGGCCCCGGGATCTCTCATTGTGTTAAATGTTGATTACGTTAACCCAAGTTTTATCTGACTATAGAGATTAAC TTTTGACCCTTATTTGACAAAATCAGAGACTGCGAGCGATGTTTCATCCTTCTAGTAACTAACTTGCTTGACGCTTACAC TTCTAGACAAAATTCAACATTCACTCTATCCATAAGTTACTACTACAACCATAACATGTCTAAGATAATTAATGCATTTT CCTTCTTGATTTGATACTTTTTTTATGATTGTTTATGCAGAGGAACCATCGATATTACACGGCACTTGTGATGTCCACCT TAATTTTCTATGTGTACATATTTGCATTCTCTTGCTGGAGGTTAAATCGAAGAATGTGGAAAGATGGGGATACATTTCTT GGATTGGTGAAGACATGCCCGGAAACATTAGCATTGGCTGCATTGAGCTTGACTGCAATCGGGCTTTTAGGCCCCCTTGC TATCTATCATGTGTATTTGATAGCGGTCAATGAGGTCAGTTTGATTAGAAGTTCTTGCCAACTTTAAGAATATTAAACTA CTTTAGCAAAAAATGCAAGAACTTAACAAAATATTACCAAATTAAAATCTAGACAAAATTCCATAGAGTTTTACTTTTAC TCTTGGGCCATGTTAGTAGTTTTAGAAATCTTAACTTGGTCACAATTGAATATACAAGTAATAACATGTTTGGATTAATT TCCTTTTTCTCGTATTAATTTGGAAAACTGGAATAGAAGCTTCTCTTCAGAATTGATTCTAAATTTAGAGTCAATTGTAG CAGAATTTCCTAATAGGCACTAAATAATGGTAGAAAGGAAATAGTTGCTTAACTAGTTGCTGTTTTATGTTATTTTCTCA TGTATTGCAGACTGCATATGAGAATTTTCGACACCGTTATGTGGGTTCAAGGAGCCCTTATGATAGAGGAATTTTAAGCA ATTTCAAAGAGGCATTTTTCGTGGCACTACCTCCTCCTAGAGTTGATTTTCGAGCTGAAGTTACATTGACATAAGGACAA TAGCAAGGACAATAGCATGGGGTGAAATCTGAGTCACTCTTACCAAACAGGGAAATGATGATCATGAAGGTGTGTCACTG GACACTGATGGATTAAAAAATGTCACTCTGATTATTATGTGTTTGCACGTTGTTGCCGACAAGGAAAGAAAAAGTTGGAT GGTGATCGATTTCTTCTTCAACGAATGAAGCTTCTTCAAGTTGGAAACTTTATATATTAGTCAAGGAAAAGCTATTTATT GTTGTTTGTCTGCATATATATGTCGATC
CDS sequence (LotjaGi3g1v0188800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAATGGAAAGGCAAATGGAAGCAACCGAATTGGAAATAGAAGTGATGGAACCCATTGATTTATGTGGGGAAGTAGA AGAAGGTGGTGAAATATTTGAAAGAAATGAAAGAGACAAAGCAACTGAAAAAAAGTTTGACTGTGGAAATCAGAGTCTGA TGAGTGCTCTAAAGACAAAGTTGCTTAAAGTGAAGAGAAATTGTCATGATCAACTTCTTCAATGTGGTGTCATTGAGAAA TTGGACACAACTAGAGTGTACCAAATTTGGCCAGGAAGAAATGTCTTTTTCTTTCATGGAAGACTCATGTGTGGTCCTGA TCCAAGAGGGTTTATTTTGACCACGGTTTCTATAATTCTTTCAAGTTGGATTTTTTCCAGATATGTTGGGAAAGATGTGC CACATCACTCAGCCATCGTTGTTATGTTCGGTGTATTGTTGACATTAATTGTGCTGGTCAACTTGATCCTCGTTAGCACA ACCGATCCAGGAATTATTCCTAGGAGCGATCAAGAATGTCCTGAAGAGGCTGGTACTAGCAATGGAACCAAAAGCAAAAA GGTAGTCAATGGGGTGGAGATGAAATTGAAATACTGTCGAATTTGCAAGATTTTTCGGCCACCCAGAAGTTGCCACTGTG CGATCTGTGACAATTGCATTGAGAGATACGATCATCACTGCCCTTGGATTGGTCAATGCATTGGATTGAGGAACCATCGA TATTACACGGCACTTGTGATGTCCACCTTAATTTTCTATGTGTACATATTTGCATTCTCTTGCTGGAGGTTAAATCGAAG AATGTGGAAAGATGGGGATACATTTCTTGGATTGGTGAAGACATGCCCGGAAACATTAGCATTGGCTGCATTGAGCTTGA CTGCAATCGGGCTTTTAGGCCCCCTTGCTATCTATCATGTGTATTTGATAGCGGTCAATGAGACTGCATATGAGAATTTT CGACACCGTTATGTGGGTTCAAGGAGCCCTTATGATAGAGGAATTTTAAGCAATTTCAAAGAGGCATTTTTCGTGGCACT ACCTCCTCCTAGAGTTGATTTTCGAGCTGAAGTTACATTGACATAA
Protein sequence (LotjaGi3g1v0188800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEMERQMEATELEIEVMEPIDLCGEVEEGGEIFERNERDKATEKKFDCGNQSLMSALKTKLLKVKRNCHDQLLQCGVIEK LDTTRVYQIWPGRNVFFFHGRLMCGPDPRGFILTTVSIILSSWIFSRYVGKDVPHHSAIVVMFGVLLTLIVLVNLILVST TDPGIIPRSDQECPEEAGTSNGTKSKKVVNGVEMKLKYCRICKIFRPPRSCHCAICDNCIERYDHHCPWIGQCIGLRNHR YYTALVMSTLIFYVYIFAFSCWRLNRRMWKDGDTFLGLVKTCPETLALAALSLTAIGLLGPLAIYHVYLIAVNETAYENF RHRYVGSRSPYDRGILSNFKEAFFVALPPPRVDFRAEVTLT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 110 | 110 | - | – | |
| PANTHER | 65 | 358 | 294 | 7.4E-148 | – | |
| PANTHER | 65 | 358 | 294 | 7.4E-148 | – | |
| TMHMM | 110 | 129 | 20 | - | – | |
| Phobius | 111 | 130 | 20 | - | – | |
| CDD | 111 | 167 | 57 | 0.00669735 | – | |
| Phobius | 131 | 135 | 5 | - | – | |
| Phobius | 136 | 158 | 23 | - | – | |
| TMHMM | 139 | 158 | 20 | - | – | |
| Phobius | 159 | 240 | 82 | - | – | |
| Pfam | 194 | 321 | 128 | 9.4E-33 | ||
| ProSiteProfiles | 197 | 247 | 51 | 25.614 | – | |
| Phobius | 241 | 265 | 25 | - | – | |
| TMHMM | 244 | 266 | 23 | - | – | |
| Phobius | 266 | 284 | 19 | - | – | |
| Phobius | 285 | 311 | 27 | - | – | |
| TMHMM | 286 | 308 | 23 | - | – | |
| Phobius | 312 | 361 | 50 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Palmitoyltransferase activity | Catalysis of the transfer of a palmitoyl (CH3-[CH2]14-CO-) group to an acceptor molecule. |
Expression pattern of LotjaGi3g1v0188800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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