Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi3g1v0194100.2

Overview

Field Value
Gene ID LotjaGi3g1v0194100
Transcript ID LotjaGi3g1v0194100.2
Related isoforms 5
Lotus japonicus genome version Gifu v1.2
Description Acyl-CoA dehydrogenase; TAIR: AT3G51840.1 acyl-CoA oxidase 4; Swiss-Prot: sp|Q96329|ACOX4_ARATH Acyl-coenzyme A oxidase 4, peroxisomal; TrEMBL-Plants: tr|I1JLD2|I1JLD2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0194100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:28169191..28175885) extracted from Lotus japonicus Gifu genome v1.2.

GATAAATGTCAAAATTCGATTGGAAATGGGGCCTATTAAATTGTTTATCCGAAGATTATTAGATGTCGGAATCAGCATTC TGTGGGCGCTGATAAGCACGACAAAGATTTTCAAAAAAAAAAAAATGAGAAAATGAGAATTGAGAAGTGACTTCCCTTTC CCTCTTGCACATCAATATCAATCTTGATCTTACGTGGAAGCTCAACTTTGCAATACAACTTCGGTTTGCGTGCCTATCCT TTTCTCTCATTTAAATTCTATAATTTATTCATTCTTCATTACATTTTCTTCTTCCCTTCTCATCATTCATCAGTATCACC TTAGCGATTTCACCTTCACGTTGCTCCTCTGCTCCTCTTATACAATCATGACACTCCTCTCTTCTAAGAATCCAGGTCCG TTTTTTTTTTCATCATCTCTGTGATTTTATTTGCAATTCCCTTTTTGACTCGTCTCCGATCTCAATAGAAATTGAGTTTT TCTAATTTGATTTGTGGTTATCATTGTTAACAATCAATACACTGCTGTATATGTTGATTATGTTTGTTTATTTATGTGCC TGGGAGAAAGGATCATAATGCTTCTCTAAAAAAAGAGAGAAGAAAGAATTCAAATGAAAAAGAAGCAAAAAAAAAAAATT AGTAAATGAAGTCTTTGGCGATATCTTTCTCCGTACACACCGTCTGACGATCGAACTATTGACTAAATGCTTAAGAAACC CAGTTATCTACCAATTGTACTCAACCTTATTGGTATTAAATGGAGTCTTTGGTAAACCAAATGGACCCAAATTTGTTTCG CATTTCGTGCGTGTTTGGATACATGGTGGGATAAAAAATCATGGTGTAGACAAAATCACAGCCACAAAAGTTGAGGGAAG TTGCTTCAGTCCATGGTGATTTTGGCTCAGTGTGTGTGCCGCCGTTTTAATTTCCAAACAGTGTATCAACTGCCAACATG ATATTCGTATAGTAATGATAATCGCTAACAATAAGGAACGCGATTTTCACGAATAAATAAATAGATTGGGGGAAATGTTT CTATTTTAATTTTAATGCAAACATGTGTCTTTAGTTTGAAGCAATCACTTCTGTTTGGAAGATTTGGTACAAAGAGATTC TTGTTTAAGCCTGGTGTACTTGGCTTGATTGAACTGTGCAACTGGCAAATCACAATTTTCATTAGTGTAATGTAAGTGTA CTAGTGTGTTATAATGTATATGTTCTAGCATTTTATTGACTTAGTGCACTGCACCCCAATTGGGTGAGATGAGCTTTATG CAAGGAACTTTGCTTGATTCAATGTTTGATCACTGGCTGCACAGTTATTTTTGTACATTGAAACAGAAGACTCAGCTATA GGAAATATGTTTTCTTCTTATGCTGTGCTCCAGTAATTTTTTTACTTTCTGACTTCTAATACATAGTTGATTGATATTTT GAATTCAATTATTGTACATGACACTTAATTTGTGCTACTTCTGATAAAAAATTATCACTAATTATGATAGTTATATTGAG CTATTTTGCATTTTAATGGATGCTTTGATTCACACAGAGGATGCTACCAAAAGGGCAATGCCTTCCTATTTTAATTTACC ACCACTGGATGTTTCTGCTGCATTTCCACAAGCAACTCCAGCATCTACATTTCCTCCTTGTGGTAAGAAATTTCTATGAT AATTTGGTCATTTTAAAAGGGAAAAAATGTTTTCGTATCTTAAGATCAATCAGGGCTGCAAGCTAAGACTTAAGGATCTG TTTATGTTAGAACCCTAAAAACTAGAAGCCTAGGGACATGATATCCTCATTTGTATTCATCATTTATTATTCACCTGGAA GTAATATGGCTTATAGACCAGATCTAGTTGAGGCGCAGAGAGGCAGAGCTTCTCTGCCCCTAATAGGTGGCTTTATCAAT TATTAATTTTTCTATTATAAGTCACTAGGCTTCTAATACCCTGTTCAACCTTCTGTTCTTCCTAGTATATACTCAGTACT CACAGAATTGGAGCTCTAATAGAGTTCTATAAGATATCAAATTCATGCCAATTTTCATTCTTTCACACTTGTAAATGATT ACTGTAGGCTTCGGAGTCCAGGTAGACTTTTTAATTTAAATATGCTCCTTTCCCCCTTGAAGCTAAAATAGCTCAAGTGG CAAGAGCTGGGGGACATATGGGTTGGGGAGGGGAAGGTCCAGGGATCAAATCCCTGGAGGGGAAATTTGGCCGATCAAAA AAAAAATATCATGTTGATTTTCTGTCATAGTGATAAGGTTGGACATAATACTCTGATGCTATAAGTTTTGATTCACATTC TACATGGTTCCCCCCCCCCCTTTTGTCCATATTGAATGGCTTGGAAAGTTGGTATTTTTTGCGGATATTTTGATTGAAAG AAGACATGCTTCAGGAATTTATGTCCATTTTACCTCTCTTGATGTTTGAAAACTCCAGCTTCAGATTATTTTCAATTTGA TGACTTGCTGACACCAGAGGAGCAGGCCATCAAGAAGAAAGTTAGAGAGTGTATGGAAAAAAATATTGCTCCAATAATGA CCGAGGTATGTTTCTGCGATGCTATCATGCTATTACTGTTTGGACGCAAATTAGTGCAATATAAAATTGTTGATGTTATC TCTTTTCTTATTTCAATCACACCATCTCATTGCTTTTATGTTTTTTCGTCAGTATTGGGAGAAGGCCAAGTTCCCATTTC ATGTTATTCCAAAGCTTGGTGCATTGCGTATTGCTGGTGGCACAATCAAGGTTCGCTCTGCATATTTTCCTATATTATTT TAAGGTATTACATAAGGTCAAGGGAGTTATGAGCAAGCTCTGATTCTCAGGGTTACGGTTGTCCCGGTCTTTCTATAACT GGAAGTGCTATAGCTATTGCAGAAGTTGCAAGGGTTGATGCAAGCTGTTCAACTTTTATTTTGGTCCATTCATCCTTGGC AATGCTCACTATTGGTAGTACCTTTGTTTCTCAATAATCATTCTCTAAATATTGTTTCATATATATTGAATGGATTTCTG TCAGTAGTTCCTGATATTTTTTTAACTTTTGATTAACTGTCAAGTTTAGCATTGTGTGGATCAGAAGCTCAGAAGGAAAA ATATCTGCCTTCGCTGGCACAGTTAGAAACTATAGCATGTTGGGTAAATTGCCTATCTTAGAATTGATTTGTTTTGCATT TTTTCTGAAGTAGCACTTCTCAAAGTAGGTTATTTTCTTAACATTAGGCTTTGACTGAACCTGACTATGGAAGTGATGCC AGTGCTTTGAAGACCACTGCAACTAAGGTGCTTCGCTCTTTGTGTTTTATTTTCTATTTGCTTCTTCAGCTAGATGCATT TTGCTTTTTTTCGACTTATTTGTCTTTTTAATTAGTCATATTGTCACTTTGCGCAATGGTTCCGAAGTTCAATAGTGCTG ATGTTCTTGTCTTGCTTTGCTTTGAAATAATCAGGTAGAAGGAGGTTGGATCCTGGAGGGCCAAAAGCGGTGGATAGGAA ACAGTACATTTGCTGATCTGTTGGTTGTCTTTGCTAGGAATGCGACAACAAATCAGATAAATGGGTTTGTGATATATGTT CTTATTTTCATTATTCAGTCTGTGTGCATATGCAAGCTTATTTATGAATTATTAGCTTATTTATAATAGACAAACTCATC TGATAGCCATGCAGATCCACTTATTTATATTATACTCTTGCTCTGCACACCCCATAACAAAAAAGAGGGAGTGAATGCAA TGATTTGATCTGGTAAAAACTAAAATGTTAACCTGATGGATGCCCATTATGGCCCGTGGAATTCTTTTTCTTTTTTATAC ATTGGAAGATGGCCCGTGGAATTCTTGCATGCACTAAAAGACCAGTGGGAGAGATTTCTCTGATTATGGGGACACATGAA AGTGAAGAATATCTACAGTCAAAACGAAAGTTTAAATTACTTAGTACTGTTGAGATATATCCACATATGTTCTGTTATGA TAGATTACTGTTATGATATATAACTTGTTAATGGACCTAATAGTCACTAATATAGCCTATAAAAACAACATAGTGAGATT GAAAGCATGTTCTCTGAGTTTATATATTCTGCGTTCCTATTGTATCCTCCTTCACCAGCAATCTTTTAATTACATATTTT TCTTGGATAATATTTCAGATATATTGTAAAAAAGGATGCACCTGGTTTAACAGTCACAAAAATAGAGAATAAAATTGGAC TTAGGATTGTACAAAATGGAGACATTGTTATGAGAAAAGTTTTTGTCTCTGACGAGGACAGAGTAGCAGGTCTTGACTCT TTTCAGGATATAAGTAAGGTAAGGTTATTTATAATGTTTCTCTGCTGTTCTTCCAAAAATGAGTGCGTTAAGTTGGTTTA TGTTAATGAAACTTCTATTACCTGATGAAGTAGAAGTAGTAGAGCATATCTCAACATTGGTTCTTGCATCTTCTTTGGGG CAGTGTTTGCACCTTCGTACTGTTTTGCAATTTTCTTTAGGTTATGGAAAAGATCATTCTCTGTCAAATTGTCAAGTTCT GCAGCCTAACTATTTACTTTTTCCTTTCTCCATGTAGTAGTTGCTCCGACAAAAAAGCCTAGAAAATTGTATGCATGGTA TAATTTGAGACGTATTGTGGAATGTTTAGACGATAGACGTTGAAATTAAACCTGTTGCTGTAAATTGTAATATTGTATTT GTCTGATGAATAGAGTTTACTTGCAGTTGCTTGGATGAGAACCTATGTATGTTCCTGATGGATATTTTTTCTCTTTGTAG CATTAATAGCATTAGAGGTAGCAAAGTATAAGTGGAATCCTGAGGAATGGATTGCTCCCCTTTTGTTTTAGCTTTAAATT CCACATATATATGTCCTAAATCCTCTCAGTACGGATTGTTGTGAAGATTGAACAAATTTGGTTAAGAGCTTAGATGCAAT TATAACTCTTGCATTAATCTTTATAGCTTCAATTAATTTTTTTCCTTTTAAGGGTCATCTTTCAAGCATACTTGATTTAT ACATTATCAATTTATCATTACTTATAGTTTTAAGTCCTCATTAAACAGGTACTTGCTGTTTCACGAGTAATGGTTGCTTG GCAACCTATTGGTATATCAATGGGCATCTACGACATGTGTCATAGGTATTTTTAATTAGAATGTTATTATACTTGAGCTT TTTCTGCAAATCATTTCTGAATTTGGAGTGGCTAAAAGGTATCTAAAGGAGAGGAAACAGTTTGGAGCACCATTAGCAGC TTTCCAAATCAACCAACAGAAACTTGTCCAGATGCTCGGTAATATTCAAGCTATGATTCTTGTTGGCTGGCGCCTTTGCA AATTGTATGAGACTGGTAAAATGACTGTAGGTCAGGCTAGCTCGGGAAAGGTAGTTTCGTATATCACATTTGTAACCCCC TGTTAATTTATAAGAAATACTAGTAACCTACTCTCTTTGATCTTCTATTGGTTGAAATTCATGTGAGGTCTATAAAATTG TCTTGGTCTCACTCCTAATTTGATCAGTCTCGCTCAAATTTTGGTGTCCCATATGAATTTTAATCAATAGGTGGGAATGT GTTGATAAAAAAATATGTTACTGGAACTTCTCCTTATCAAGAAAAGCAGTTTCACTGTGGTAGATGCCTGCTAATGAAGT TTGCCATCACTTTTCAGTCATGGATCACCTTGAGAGCAAGAGAAACAGCTGCTCTAGGGAGAGAATTGCTCGGTGGCAAT GGTATTTTGGCTGATTTTCTTGTGGCAAAGGTATGAGTAATTCCTGAATCAAGATTTCTTTTGTTGAACCACCAATCTGA TCAAAGATAAAATTGGGTTATGGATATTCATGCTAATGAGTGATCATCTAGCTTAACTATAATTTATAGATTCCTGAATA ATACTTTCCATTGCTTTGCTGCTAATTGGCTATTAATGTTCATTTGTTCTCTAACATTTGTTTTTCTTCCTTCTTTTGCA GGCATTCTGTGATTTAGAACCCATCTATACCTATGAAGGCACTTATGATATTAACACCTTAGTTACAGGCAGGGAAATTA CTGGTTTTGCCAGCTTTAAGCCAGTTCCCCAAAGAAGTCGAATGTGAATGCGTAAAACGTGTTCTTTCAATAGATTCCAA TAAACCAGCGTCCAATAAACCAGCTTCTGTGTATCGCGAGTGTGTTATTATGACTGGGAATTTGTTGAAACAAGAAGTAT TCAATAGTTATACAAACTAGACATGACTATTTTACGCTTGGGTAATTTGATTCTATAACAGCATCTCCAATGCTAGTTCT TATTTCTTAGTTCTTAGCACTATTCATGTGGGCCCGTACTGCCACATGTGCTTAAGCAACTCTATGCACATTTTGCTCCA ACCATGAGTTCTTAGTTCTTATCACTATTCATTTGGTCTCACAATATCATTATAGTAGTAATATTTTTTACTTTCATATA ATTTTGATTTAAATTTAAATGTTAATTCAATATCTAAATTAAATGAATTGATGAATGAGAGAAAAAAAATTAACTTTTCA TGCTAAGAACTCAAAAAGTAAAACATCTTATATAAGAACCTAGTTCTTATTTTTAAGAACTAAGAAGTAAGAACTCCACG TCATCTCCTCCAATGGTTAAGAACTCAGTTCTTAGTTCTTAACTCAAAAATAAGA
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0194100.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGACACTCCTCTCTTCTAAGAATCCAGAGGATGCTACCAAAAGGGCAATGCCTTCCTATTTTAATTTACCACCACTGGA TGTTTCTGCTGCATTTCCACAAGCAACTCCAGCATCTACATTTCCTCCTTGTGCTTCAGATTATTTTCAATTTGATGACT TGCTGACACCAGAGGAGCAGGCCATCAAGAAGAAAGTTAGAGAGTGTATGGAAAAAAATATTGCTCCAATAATGACCGAG TATTGGGAGAAGGCCAAGTTCCCATTTCATGTTATTCCAAAGCTTGGTGCATTGCGTATTGCTGGTGGCACAATCAAGGG TTACGGTTGTCCCGGTCTTTCTATAACTGGAAGTGCTATAGCTATTGCAGAAGTTGCAAGGGTTGATGCAAGCTGTTCAA CTTTTATTTTGGTCCATTCATCCTTGGCAATGCTCACTATTGCATTGTGTGGATCAGAAGCTCAGAAGGAAAAATATCTG CCTTCGCTGGCACAGTTAGAAACTATAGCATGTTGGGCTTTGACTGAACCTGACTATGGAAGTGATGCCAGTGCTTTGAA GACCACTGCAACTAAGGTAGAAGGAGGTTGGATCCTGGAGGGCCAAAAGCGGTGGATAGGAAACAGTACATTTGCTGATC TGTTGGTTGTCTTTGCTAGGAATGCGACAACAAATCAGATAAATGGATATATTGTAAAAAAGGATGCACCTGGTTTAACA GTCACAAAAATAGAGAATAAAATTGGACTTAGGATTGTACAAAATGGAGACATTGTTATGAGAAAAGTTTTTGTCTCTGA CGAGGACAGAGTAGCAGGTCTTGACTCTTTTCAGGATATAAGTAAGGTACTTGCTGTTTCACGAGTAATGGTTGCTTGGC AACCTATTGGTATATCAATGGGCATCTACGACATGTGTCATAGGTATCTAAAGGAGAGGAAACAGTTTGGAGCACCATTA GCAGCTTTCCAAATCAACCAACAGAAACTTGTCCAGATGCTCGGTAATATTCAAGCTATGATTCTTGTTGGCTGGCGCCT TTGCAAATTGTATGAGACTGGTAAAATGACTGTAGGTCAGGCTAGCTCGGGAAAGTCATGGATCACCTTGAGAGCAAGAG AAACAGCTGCTCTAGGGAGAGAATTGCTCGGTGGCAATGGTATTTTGGCTGATTTTCTTGTGGCAAAGGCATTCTGTGAT TTAGAACCCATCTATACCTATGAAGGCACTTATGATATTAACACCTTAGTTACAGGCAGGGAAATTACTGGTTTTGCCAG CTTTAAGCCAGTTCCCCAAAGAAGTCGAATGTGA
Download CDS Sequence

Protein sequence (LotjaGi3g1v0194100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MTLLSSKNPEDATKRAMPSYFNLPPLDVSAAFPQATPASTFPPCASDYFQFDDLLTPEEQAIKKKVRECMEKNIAPIMTE YWEKAKFPFHVIPKLGALRIAGGTIKGYGCPGLSITGSAIAIAEVARVDASCSTFILVHSSLAMLTIALCGSEAQKEKYL PSLAQLETIACWALTEPDYGSDASALKTTATKVEGGWILEGQKRWIGNSTFADLLVVFARNATTNQINGYIVKKDAPGLT VTKIENKIGLRIVQNGDIVMRKVFVSDEDRVAGLDSFQDISKVLAVSRVMVAWQPIGISMGIYDMCHRYLKERKQFGAPL AAFQINQQKLVQMLGNIQAMILVGWRLCKLYETGKMTVGQASSGKSWITLRARETAALGRELLGGNGILADFLVAKAFCD LEPIYTYEGTYDINTLVTGREITGFASFKPVPQRSRM
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR43188
3 435 433 8.5E-264 –
PANTHER
PTHR43188:SF5
3 435 433 8.5E-264 –
Gene3D
G3DSA:1.10.540.10
36 169 134 1.0E-38
IPR037069
SUPERFAMILY
SSF56645
46 274 229 1.7E-61
IPR009100
Pfam
PF02771
56 165 110 1.7E-23
IPR013786
Gene3D
G3DSA:2.40.110.10
170 275 106 3.7E-32 –
Pfam
PF02770
171 263 93 9.0E-23
IPR006091
SUPERFAMILY
SSF47203
277 425 149 6.77E-33
IPR036250
Gene3D
G3DSA:1.20.140.10
277 437 161 1.4E-37 –
Pfam
PF00441
280 421 142 1.4E-22
IPR009075
ProSitePatterns
PS00073
381 400 20 -
IPR006089

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003995
Molecular function Acyl-CoA dehydrogenase activity Catalysis of the reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor.
Subterm of
GO:0016627
Molecular function Oxidoreductase activity, acting on the CH-CH group of donors Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.
Subterm of
GO:0050660
Molecular function Flavin adenine dinucleotide binding Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2.
Subterm of
GO:0055114
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0194100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…