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Field | Value |
---|---|
Gene ID | LotjaGi3g1v0194100 |
Transcript ID | LotjaGi3g1v0194100.3 |
Related isoforms 5 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Acyl-CoA dehydrogenase; TAIR: AT3G51840.1 acyl-CoA oxidase 4; Swiss-Prot: sp|Q96329|ACOX4_ARATH Acyl-coenzyme A oxidase 4, peroxisomal; TrEMBL-Plants: tr|I1JLD2|I1JLD2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0194100 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:28170668..28175317) extracted from Lotus japonicus Gifu genome v1.2.
CTTCTGATAAAAAATTATCACTAATTATGATAGTTATATTGAGCTATTTTGCATTTTAATGGATGCTTTGATTCACACAG AGGATGCTACCAAAAGGGCAATGCCTTCCTATTTTAATTTACCACCACTGGATGTTTCTGCTGCATTTCCACAAGCAACT CCAGCATCTACATTTCCTCCTTGTGGTAAGAAATTTCTATGATAATTTGGTCATTTTAAAAGGGAAAAAATGTTTTCGTA TCTTAAGATCAATCAGGGCTGCAAGCTAAGACTTAAGGATCTGTTTATGTTAGAACCCTAAAAACTAGAAGCCTAGGGAC ATGATATCCTCATTTGTATTCATCATTTATTATTCACCTGGAAGTAATATGGCTTATAGACCAGATCTAGTTGAGGCGCA GAGAGGCAGAGCTTCTCTGCCCCTAATAGGTGGCTTTATCAATTATTAATTTTTCTATTATAAGTCACTAGGCTTCTAAT ACCCTGTTCAACCTTCTGTTCTTCCTAGTATATACTCAGTACTCACAGAATTGGAGCTCTAATAGAGTTCTATAAGATAT CAAATTCATGCCAATTTTCATTCTTTCACACTTGTAAATGATTACTGTAGGCTTCGGAGTCCAGGTAGACTTTTTAATTT AAATATGCTCCTTTCCCCCTTGAAGCTAAAATAGCTCAAGTGGCAAGAGCTGGGGGACATATGGGTTGGGGAGGGGAAGG TCCAGGGATCAAATCCCTGGAGGGGAAATTTGGCCGATCAAAAAAAAAATATCATGTTGATTTTCTGTCATAGTGATAAG GTTGGACATAATACTCTGATGCTATAAGTTTTGATTCACATTCTACATGGTTCCCCCCCCCCCTTTTGTCCATATTGAAT GGCTTGGAAAGTTGGTATTTTTTGCGGATATTTTGATTGAAAGAAGACATGCTTCAGGAATTTATGTCCATTTTACCTCT CTTGATGTTTGAAAACTCCAGCTTCAGATTATTTTCAATTTGATGACTTGCTGACACCAGAGGAGCAGGCCATCAAGAAG AAAGTTAGAGAGTGTATGGAAAAAAATATTGCTCCAATAATGACCGAGGTATGTTTCTGCGATGCTATCATGCTATTACT GTTTGGACGCAAATTAGTGCAATATAAAATTGTTGATGTTATCTCTTTTCTTATTTCAATCACACCATCTCATTGCTTTT ATGTTTTTTCGTCAGTATTGGGAGAAGGCCAAGTTCCCATTTCATGTTATTCCAAAGCTTGGTGCATTGCGTATTGCTGG TGGCACAATCAAGGTTCGCTCTGCATATTTTCCTATATTATTTTAAGGTATTACATAAGGTCAAGGGAGTTATGAGCAAG CTCTGATTCTCAGGGTTACGGTTGTCCCGGTCTTTCTATAACTGGAAGTGCTATAGCTATTGCAGAAGTTGCAAGGGTTG ATGCAAGCTGTTCAACTTTTATTTTGGTCCATTCATCCTTGGCAATGCTCACTATTGGTAGTACCTTTGTTTCTCAATAA TCATTCTCTAAATATTGTTTCATATATATTGAATGGATTTCTGTCAGTAGTTCCTGATATTTTTTTAACTTTTGATTAAC TGTCAAGTTTAGCATTGTGTGGATCAGAAGCTCAGAAGGAAAAATATCTGCCTTCGCTGGCACAGTTAGAAACTATAGCA TGTTGGGTAAATTGCCTATCTTAGAATTGATTTGTTTTGCATTTTTTCTGAAGTAGCACTTCTCAAAGTAGGTTATTTTC TTAACATTAGGCTTTGACTGAACCTGACTATGGAAGTGATGCCAGTGCTTTGAAGACCACTGCAACTAAGGTGCTTCGCT CTTTGTGTTTTATTTTCTATTTGCTTCTTCAGCTAGATGCATTTTGCTTTTTTTCGACTTATTTGTCTTTTTAATTAGTC ATATTGTCACTTTGCGCAATGGTTCCGAAGTTCAATAGTGCTGATGTTCTTGTCTTGCTTTGCTTTGAAATAATCAGGTA GAAGGAGGTTGGATCCTGGAGGGCCAAAAGCGGTGGATAGGAAACAGTACATTTGCTGATCTGTTGGTTGTCTTTGCTAG GAATGCGACAACAAATCAGATAAATGGGTTTGTGATATATGTTCTTATTTTCATTATTCAGTCTGTGTGCATATGCAAGC TTATTTATGAATTATTAGCTTATTTATAATAGACAAACTCATCTGATAGCCATGCAGATCCACTTATTTATATTATACTC TTGCTCTGCACACCCCATAACAAAAAAGAGGGAGTGAATGCAATGATTTGATCTGGTAAAAACTAAAATGTTAACCTGAT GGATGCCCATTATGGCCCGTGGAATTCTTTTTCTTTTTTATACATTGGAAGATGGCCCGTGGAATTCTTGCATGCACTAA AAGACCAGTGGGAGAGATTTCTCTGATTATGGGGACACATGAAAGTGAAGAATATCTACAGTCAAAACGAAAGTTTAAAT TACTTAGTACTGTTGAGATATATCCACATATGTTCTGTTATGATAGATTACTGTTATGATATATAACTTGTTAATGGACC TAATAGTCACTAATATAGCCTATAAAAACAACATAGTGAGATTGAAAGCATGTTCTCTGAGTTTATATATTCTGCGTTCC TATTGTATCCTCCTTCACCAGCAATCTTTTAATTACATATTTTTCTTGGATAATATTTCAGATATATTGTAAAAAAGGAT GCACCTGGTTTAACAGTCACAAAAATAGAGAATAAAATTGGACTTAGGATTGTACAAAATGGAGACATTGTTATGAGAAA AGTTTTTGTCTCTGACGAGGACAGAGTAGCAGGTCTTGACTCTTTTCAGGATATAAGTAAGGTAAGGTTATTTATAATGT TTCTCTGCTGTTCTTCCAAAAATGAGTGCGTTAAGTTGGTTTATGTTAATGAAACTTCTATTACCTGATGAAGTAGAAGT AGTAGAGCATATCTCAACATTGGTTCTTGCATCTTCTTTGGGGCAGTGTTTGCACCTTCGTACTGTTTTGCAATTTTCTT TAGGTTATGGAAAAGATCATTCTCTGTCAAATTGTCAAGTTCTGCAGCCTAACTATTTACTTTTTCCTTTCTCCATGTAG TAGTTGCTCCGACAAAAAAGCCTAGAAAATTGTATGCATGGTATAATTTGAGACGTATTGTGGAATGTTTAGACGATAGA CGTTGAAATTAAACCTGTTGCTGTAAATTGTAATATTGTATTTGTCTGATGAATAGAGTTTACTTGCAGTTGCTTGGATG AGAACCTATGTATGTTCCTGATGGATATTTTTTCTCTTTGTAGCATTAATAGCATTAGAGGTAGCAAAGTATAAGTGGAA TCCTGAGGAATGGATTGCTCCCCTTTTGTTTTAGCTTTAAATTCCACATATATATGTCCTAAATCCTCTCAGTACGGATT GTTGTGAAGATTGAACAAATTTGGTTAAGAGCTTAGATGCAATTATAACTCTTGCATTAATCTTTATAGCTTCAATTAAT TTTTTTCCTTTTAAGGGTCATCTTTCAAGCATACTTGATTTATACATTATCAATTTATCATTACTTATAGTTTTAAGTCC TCATTAAACAGGTACTTGCTGTTTCACGAGTAATGGTTGCTTGGCAACCTATTGGTATATCAATGGGCATCTACGACATG TGTCATAGGTATTTTTAATTAGAATGTTATTATACTTGAGCTTTTTCTGCAAATCATTTCTGAATTTGGAGTGGCTAAAA GGTATCTAAAGGAGAGGAAACAGTTTGGAGCACCATTAGCAGCTTTCCAAATCAACCAACAGAAACTTGTCCAGATGCTC GGTAATATTCAAGCTATGATTCTTGTTGGCTGGCGCCTTTGCAAATTGTATGAGACTGGTAAAATGACTGTAGGTCAGGC TAGCTCGGGAAAGGTAGTTTCGTATATCACATTTGTAACCCCCTGTTAATTTATAAGAAATACTAGTAACCTACTCTCTT TGATCTTCTATTGGTTGAAATTCATGTGAGGTCTATAAAATTGTCTTGGTCTCACTCCTAATTTGATCAGTCTCGCTCAA ATTTTGGTGTCCCATATGAATTTTAATCAATAGGTGGGAATGTGTTGATAAAAAAATATGTTACTGGAACTTCTCCTTAT CAAGAAAAGCAGTTTCACTGTGGTAGATGCCTGCTAATGAAGTTTGCCATCACTTTTCAGTCATGGATCACCTTGAGAGC AAGAGAAACAGCTGCTCTAGGGAGAGAATTGCTCGGTGGCAATGGTATTTTGGCTGATTTTCTTGTGGCAAAGGTATGAG TAATTCCTGAATCAAGATTTCTTTTGTTGAACCACCAATCTGATCAAAGATAAAATTGGGTTATGGATATTCATGCTAAT GAGTGATCATCTAGCTTAACTATAATTTATAGATTCCTGAATAATACTTTCCATTGCTTTGCTGCTAATTGGCTATTAAT GTTCATTTGTTCTCTAACATTTGTTTTTCTTCCTTCTTTTGCAGGCATTCTGTGATTTAGAACCCATCTATACCTATGAA GGCACTTATGATATTAACACCTTAGTTACAGGCAGGGAAATTACTGGTTTTGCCAGCTTTAAGCCAGTTCCCCAAAGAAG TCGAATGTGA
CDS sequence (LotjaGi3g1v0194100.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATGCTTTGATTCACACAGAGGATGCTACCAAAAGGGCAATGCCTTCCTATTTTAATTTACCACCACTGGATGTTTC TGCTGCATTTCCACAAGCAACTCCAGCATCTACATTTCCTCCTTGTGCTTCAGATTATTTTCAATTTGATGACTTGCTGA CACCAGAGGAGCAGGCCATCAAGAAGAAAGTTAGAGAGTGTATGGAAAAAAATATTGCTCCAATAATGACCGAGTATTGG GAGAAGGCCAAGTTCCCATTTCATGTTATTCCAAAGCTTGGTGCATTGCGTATTGCTGGTGGCACAATCAAGGGTTACGG TTGTCCCGGTCTTTCTATAACTGGAAGTGCTATAGCTATTGCAGAAGTTGCAAGGGTTGATGCAAGCTGTTCAACTTTTA TTTTGGTCCATTCATCCTTGGCAATGCTCACTATTGCATTGTGTGGATCAGAAGCTCAGAAGGAAAAATATCTGCCTTCG CTGGCACAGTTAGAAACTATAGCATGTTGGGCTTTGACTGAACCTGACTATGGAAGTGATGCCAGTGCTTTGAAGACCAC TGCAACTAAGGTAGAAGGAGGTTGGATCCTGGAGGGCCAAAAGCGGTGGATAGGAAACAGTACATTTGCTGATCTGTTGG TTGTCTTTGCTAGGAATGCGACAACAAATCAGATAAATGGATATATTGTAAAAAAGGATGCACCTGGTTTAACAGTCACA AAAATAGAGAATAAAATTGGACTTAGGATTGTACAAAATGGAGACATTGTTATGAGAAAAGTTTTTGTCTCTGACGAGGA CAGAGTAGCAGGTCTTGACTCTTTTCAGGATATAAGTAAGGTACTTGCTGTTTCACGAGTAATGGTTGCTTGGCAACCTA TTGGTATATCAATGGGCATCTACGACATGTGTCATAGGTATCTAAAGGAGAGGAAACAGTTTGGAGCACCATTAGCAGCT TTCCAAATCAACCAACAGAAACTTGTCCAGATGCTCGGTAATATTCAAGCTATGATTCTTGTTGGCTGGCGCCTTTGCAA ATTGTATGAGACTGGTAAAATGACTGTAGGTCAGGCTAGCTCGGGAAAGTCATGGATCACCTTGAGAGCAAGAGAAACAG CTGCTCTAGGGAGAGAATTGCTCGGTGGCAATGGTATTTTGGCTGATTTTCTTGTGGCAAAGGCATTCTGTGATTTAGAA CCCATCTATACCTATGAAGGCACTTATGATATTAACACCTTAGTTACAGGCAGGGAAATTACTGGTTTTGCCAGCTTTAA GCCAGTTCCCCAAAGAAGTCGAATGTGA
Protein sequence (LotjaGi3g1v0194100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDALIHTEDATKRAMPSYFNLPPLDVSAAFPQATPASTFPPCASDYFQFDDLLTPEEQAIKKKVRECMEKNIAPIMTEYW EKAKFPFHVIPKLGALRIAGGTIKGYGCPGLSITGSAIAIAEVARVDASCSTFILVHSSLAMLTIALCGSEAQKEKYLPS LAQLETIACWALTEPDYGSDASALKTTATKVEGGWILEGQKRWIGNSTFADLLVVFARNATTNQINGYIVKKDAPGLTVT KIENKIGLRIVQNGDIVMRKVFVSDEDRVAGLDSFQDISKVLAVSRVMVAWQPIGISMGIYDMCHRYLKERKQFGAPLAA FQINQQKLVQMLGNIQAMILVGWRLCKLYETGKMTVGQASSGKSWITLRARETAALGRELLGGNGILADFLVAKAFCDLE PIYTYEGTYDINTLVTGREITGFASFKPVPQRSRM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 8 | 433 | 426 | 3.8E-263 | – | |
PANTHER | 8 | 433 | 426 | 3.8E-263 | – | |
Gene3D | 34 | 167 | 134 | 9.9E-39 | ||
SUPERFAMILY | 44 | 272 | 229 | 1.7E-61 | ||
Pfam | 54 | 163 | 110 | 1.6E-23 | ||
Gene3D | 168 | 273 | 106 | 3.6E-32 | – | |
Pfam | 169 | 261 | 93 | 8.9E-23 | ||
Gene3D | 275 | 435 | 161 | 1.4E-37 | – | |
SUPERFAMILY | 275 | 423 | 149 | 6.77E-33 | ||
Pfam | 278 | 419 | 142 | 1.4E-22 | ||
ProSitePatterns | 379 | 398 | 20 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Acyl-CoA dehydrogenase activity | Catalysis of the reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor. | ||
Molecular function | Oxidoreductase activity, acting on the CH-CH group of donors | Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor. | ||
Molecular function | Flavin adenine dinucleotide binding | Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2. | ||
Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi3g1v0194100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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