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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0194200 |
| Transcript ID | LotjaGi3g1v0194200.1 |
| Related isoforms 8 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Beta-glucosidase, putative; TAIR: AT1G02850.2 beta glucosidase 11; Swiss-Prot: sp|B3H5Q1|BGL11_ARATH Beta-glucosidase 11; TrEMBL-Plants: tr|G7JP63|G7JP63_MEDTR Glycoside hydrolase family 1 protein; Found in the gene: LotjaGi3g1v0194200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:28177694..28183073) extracted from Lotus japonicus Gifu genome v1.2.
AGAACAACCATCAAAGAGAAAGATACTGCCATGATGCACCCACCTGACACCACTACCTTTAAATTCTTTGACTAATTCCT CTAAAACACAAAAAGCACTTGTCCAGCTACTCCTAAATGGCCTCCCACTAGCAAGTTTACTAAAATAATCGGACTCAGTG CAGCAACCTCTTCCCCAAACCAGAAAACAAATGTTAATTTATAAGTAAAACAATTGATTTTGAATGGTGGGATTTAGAAC TGCATACTCTGCAGGTATTTTTACAAATGCAGGGGTTTAAGACATATTTAAGTGTGCGTCAGCTTGCTGAGTTGGTCTAT TTCACGTCACGTTCTGTCTTAATAAAAATAAGATGCTTCACGCTGTCCTAAAATCTATATGGTGTTCACATAAACAATAT ATATACTTTACTTTTATTTTGTCCTTAACGAAGAAATTACATGCTTGATGTTCCAAAAACACAGTTCAAAGGAGAAAAAG ATGAGGATGTTAAAGGTGGTCTTTGTTCTGATACATTTGTTAGCTGCAGCTGTATTGGCTAATCCCTTGAGCAAGAATGA CTTCCCACCTCACTTCTTGTTTGGTGCATCATCATCAGCATATCAGGTTCTCTTCATATTTTTTATTATATGTGTGGATA TAACCAATTGTGTATTAAACTATGTATTTGGGAATTGGGATGATGTGAATGAAAGGTTGAAGATGCTGCAAATGAAGATG GCAGGAAGCCTAGCATATGGGATACCTTCGTACATGCTGCTGGCAATGGTGCTGTTTCATTATGCATATATAACTTAATT TCTGCAATTTGTGAGTGTGTGTTTTTTGGATTTTAATTGGGTTATTTAAGTTAGTAATGTTTGATGATAATAAATTTACT AACCCAAAATGGTTAGTTTGTTACCTAAGCTATTTGAGCACAGTAAAATTATGATTCTTCAGATTCAGAATTCGAAGTGG AGGTGTTGCAGAATTCATTTCTTTCATGTTTATCAAGAAGATAACCAGGTTCCAGATTATCTAGCTAATGAGGCTCATGA GTTTCCTATTGGTCTGCACCTGTTGTAAGGACCTACTGTTAGGAGTAGCAGTATCTGGTTTAGTGATTTTTCAGGAGTGT CTTTCCCACGTAGCGTAGTGGTGTAGTGTATCTATTACTCCTGTCTGATTTTTAGTCCCACAAGTTATGTGAATGCATTC AAAAATAGTAGAACCTTTAAGATATAGCATCAGATTGGGATTCTTGTAGTATAAGAAAAATTCTTATACCCAGAAAAAGT AATTATCACTCATTATAGGTATAGAGTACTGTCCAAAGAAAAAACAAATGTTCTAAGAGATCCCTTTAGACCATGGGTTT CTATAGAGGACATGTATTCATGATCACATATTCATAGTTACAATAATGAAATTCTTCATTTCCCTTCAATTTTCAGCAAA GATACACAGGGGAGATAAGGACATTGGATGCGATCAATATCACAAGTATAAGGTCAGTAGATGTGGCATGTATATTGTAT ACCCATGGATTAGCAGCAGTCTCATCTTTCGCAGCTCAGAGACTGGTTTTAAATTAACCTTCCAACCTAATAATTTGTAC CATAAAGCATCCTCCATACACACATAAATATCTTATTAGTAGTATACATGCCCATCTTTTCTTGCAGGAAGATGTCAAAC TCATGGTGAAAATGGGTTTAGATGCCTACAGATTTTCCATATCTTGGTCAAGGCTTGTTCCAGGTATTATCACACAAATG TAGCAAATGATAGATTCTTATATGTGATCATGGAGTAAAAGAAGTAATTGTTCTAGCATTTTGACCAAAACTAGCATCTA AAATAATTCTCGCACCTTCATGAGCATCTATGAAATTATTTGTTGTTCTGACCTTGATCTCTTGTATTACCAGATGGGAA AGGACCAATCAATCCCAAGGGATTACAGTATTACAACAACCTTATCAATGAACTAATCAGCCAAGGTTCTTTTGCATCCT AGAAATACTTCTTAAAGTTTAATTTAACCAGATTCACTTGAATCCTTATCTTTCCAAGTAAGACATATGTTATTCTTTGT TTTTCTTCCTTTGTAGGAATCCAACCACATATTACATTGCATCACTTGGACCTGCCACAAGCACTTGAAGATGAATATGG AGGATGGCTTCGCCGAAGAGTAGTGTATGGTTCCCAAACTTCAAATGTCTAATACCCTGACCGTCATCTACTAGATGAGA TTTCAAACAAACTACATCTAGCTCAATAAAAAAAATCACATATGTTGTCTTGCAGAAAAGACTTCACAGCATATGCAGAT GTGTGCTTCAGAGAGTTTGGCGATAGAGTTAAATATTGGACCACAGTGAATGAGGGAAATCTGTTCGCATTTGGGGGCTA TGAATCAGGACTTCTTCCCCCTCAACGGTGTTCCCCCTCCTCTATACCTAACTGCTCTAGGGGAAATTCCTCAACTGAGC CATATTTGGTAGCCCATCATATTTTGTTAGCACATGCATCAGCTGCTAGACTATATCGGAAGAAGTACCAGGTAAACCAA TTTCTGTTACAAGCATGATGCACTTGGTAGCATAATTATATATGAAGGATGTGTTATAAGGTGAATAGGTGATAGTTAAG ATATCCTTTTCAAAATGATAATCAAACTATAATTTGTCTTCAAAACTACCTCTGGTGTATGCAGGACAAGCAACATGGAT TTATTGGGTTAAATCTCCTTACGTTTGGTTTTGTTCCTCTAACCAAAACTAGTGACGATATAAATGCCACTCAAAGGGCC CAAGACTTCTATACGGGGTGGTAAGTAACACTAACAATTGGAAAGGCTTAGTTTTTTCTTTGGTTGGGAGAGTTTATCCA CCCATAGTGGTCTTACTGGCTTGAAAAGGATTGCCTCAGTGGAGGATACCTGTGGTTTAAACAAAAATACCCTCTAGAGT TGATTTTGTCTATGCTTTTGTTTTTTTTCAGGTTTTTGAATCCCTTGATTTTTGGAGAATATCCTGGCATCATGAAAAAG AATGCTGGCTCAAGACTTCCTGTCTTCACCAAAAGGGAATCAAATCTGGTCAAGGGCTCAATGGACTTCCTAGGAATAAA TTTCTACTACACATTTCTAGTTAAGAACAACCCAGACAGCCTGCGCTCAGAGGATAGAAGTTTCACAGCAGATATGGCCG CGGAGCTTGAATGTATGTTTCTATTTATGTAAATGTAGGTTTTGAGGTTAAACAACTAATTTTCACATAAATATCTCTTT ATTCAACCAACTTTGAAGAACTTTCATTCAATCATGTTTTTTTCCCTTGTAGACCTTACCGGAAATGGTTCGTCTACATA TGAGGTAAGAGTAGTGTTTGAATGTTCCTCTTATTCTTTAAGCATTGAAGCTTCCATGTTTTCTACTAACTATCTGTTTG GTTTAGCATCCAATTACACCCTGGATTTTGAAAGAGATTCTTGCGTCATTGAAGAAAGATTATGGCAATTTTCCAGTTTA CATTCACGAAAACGGTATGCTTGGCTGAGATCAATGTTTTGTAAGCCTCCAAATCCTTTTATCAACAAAATCAACTTTTT TGGTGTACTGCTATGATAAATCTCCTCACTTCTCAGGTCAACAAACACAACGCAATTCATCATTGGATGACAGGCCAAGG GTGAAGTACCTGTGTAAATACATAGGGAGCCTGCTTGATATACTGAGGTACTTATATTTTCATTTTCAAGTAGGGACTTC AATGTATGTATGTGTATCATATCCTAATACGATCTTCGGTATCAGTGCCCCTTTGATTCTACTCTACTCTATAGCATATT TGGATTAACTTCTCTTTCCTCATAAACATTCTGACACTCAGAAGCTACTCACATAAGCTTCTCCCCATAATTCATTTTGA CTTTAAATCAATTGTAGAACTAGAAGGATTTCCAAACGTTCTATATATTACAAATAAATGCGTCGATTTTAAGAATTCAA GGTTGTTCTCAGTTTTTCCCTGAATGCTAATGTTGTTTTTATTTTGCTTTGTTGTTTTCTCTCTTCTTTCCTTTTCCATT GCTCTTGTCACATTGAAAGGGATGGAGTGAATTTAAGAGGTTATTTTGTATGGTCCTTCTTGGATATGTTCGAGGTACTG AATGGATATGAATCAAGCTATGGCCTATACTTTATAGATTTGAAAGATCCAGCTTTGAGGAGGCAATCTAAGCTTTCTTC AGTGTGGTACTCAAATTTTCTGAACAATGGGAATATACCAAAGGTCACCATCATGGACATTGAGAAGAATGCATCTGTGC TTTCCAACACTGTTACTGCATAATGCCATTAAAGTAATCAAGACTAGTTAAATTTGAAGGTTGTTCTGTACTCGCATCTT TTTTTTACCAGGTCCTAATTTTCTTCTTTGTATGACCGTGTGAGCGAATAAAGTGACATGATTTATGGTGTAAAGTTTTG AAAATCATTAGCATTTTACTCAACAGTACATGATTTGCTACTATATTATGAGTTATGACCATGAATGTAAATATTCATGA TTTCTATTTTCATGACGTCCATTCATTCTTCTAGTTCTGATAATGAAAAACAACTCCTCATGGTTCTCCTTGGATTGATC CATCGACGATTTCAACAAGTCCTTATTATCTTCATCCAGGTTTCACCTCCATTAGACATGAACTATATCATACCTAGTCA AGATTGATGAAGCATGTGTTGATCTCGAAAAATAATTTTAAGGTCATCAATGGTTTTATCAAAGGCACAACCTGAATTTG GTCGTCTCTATGAAGTTTGAGATCGTTGTAAACCCACAATGATTATCCTGGATAAAATGTTCCTTATAAGAGCAAATTGC AAAGTGTTGTCTAGATTGAAGATCCTGCTGAACTATGGAACAATTTACAAGAAATGTTTTCCTAGGGAGATCATTTTTCG TTTATCAAATCTTCTCCAAGAAATTCACTCTATTCATCAGAGAGGTCGCACAGTTTCTTCCTATTTTAATGATTTGAAAA CTTTGTGAAGAATTGGATTCACTTCGACCAATTCCTTCATGTGATTTGCATCCTCATTACTTATTCTTGTCAATTGGTTC ATTTTCTGAAAGGTTATACGGAAACTGAATTTGTTATTTGCTTCCTCAAAATTCCTTGTGGTGAGGTTCTGTTTGTGTTA GTCTTTTCCTTAGGTTATGTAGGTTAAGTCTATTATGAAGATTTTTGGTGCAGTGTAATGAATAATGATGATATGCAGAA TATCATTAGATAGATTGCTTGTTTAAGTTGTTTTACTTTTCTGGTTTTCATGAAACAATGTGCTATCAAGTTGTATTAGA AATCTTATATTCACTCTATG
CDS sequence (LotjaGi3g1v0194200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTCCAAAAACACAGTTCAAAGGAGAAAAAGATGAGGATGTTAAAGGTGGTCTTTGTTCTGATACATTTGTTAGCTGC AGCTGTATTGGCTAATCCCTTGAGCAAGAATGACTTCCCACCTCACTTCTTGTTTGGTGCATCATCATCAGCATATCAGG TTGAAGATGCTGCAAATGAAGATGGCAGGAAGCCTAGCATATGGGATACCTTCGTACATGCTGCTGGCAATGCAAAGATA CACAGGGGAGATAAGGACATTGGATGCGATCAATATCACAAGTATAAGGAAGATGTCAAACTCATGGTGAAAATGGGTTT AGATGCCTACAGATTTTCCATATCTTGGTCAAGGCTTGTTCCAGATGGGAAAGGACCAATCAATCCCAAGGGATTACAGT ATTACAACAACCTTATCAATGAACTAATCAGCCAAGGAATCCAACCACATATTACATTGCATCACTTGGACCTGCCACAA GCACTTGAAGATGAATATGGAGGATGGCTTCGCCGAAGAGTAGTAAAAGACTTCACAGCATATGCAGATGTGTGCTTCAG AGAGTTTGGCGATAGAGTTAAATATTGGACCACAGTGAATGAGGGAAATCTGTTCGCATTTGGGGGCTATGAATCAGGAC TTCTTCCCCCTCAACGGTGTTCCCCCTCCTCTATACCTAACTGCTCTAGGGGAAATTCCTCAACTGAGCCATATTTGGTA GCCCATCATATTTTGTTAGCACATGCATCAGCTGCTAGACTATATCGGAAGAAGTACCAGGACAAGCAACATGGATTTAT TGGGTTAAATCTCCTTACGTTTGGTTTTGTTCCTCTAACCAAAACTAGTGACGATATAAATGCCACTCAAAGGGCCCAAG ACTTCTATACGGGGTGGTTTTTGAATCCCTTGATTTTTGGAGAATATCCTGGCATCATGAAAAAGAATGCTGGCTCAAGA CTTCCTGTCTTCACCAAAAGGGAATCAAATCTGGTCAAGGGCTCAATGGACTTCCTAGGAATAAATTTCTACTACACATT TCTAGTTAAGAACAACCCAGACAGCCTGCGCTCAGAGGATAGAAGTTTCACAGCAGATATGGCCGCGGAGCTTGAATACC TTACCGGAAATGGTTCGTCTACATATGAGCATCCAATTACACCCTGGATTTTGAAAGAGATTCTTGCGTCATTGAAGAAA GATTATGGCAATTTTCCAGTTTACATTCACGAAAACGGTCAACAAACACAACGCAATTCATCATTGGATGACAGGCCAAG GGTGAAGTACCTGTGTAAATACATAGGGAGCCTGCTTGATATACTGAGGGATGGAGTGAATTTAAGAGGTTATTTTGTAT GGTCCTTCTTGGATATGTTCGAGGTACTGAATGGATATGAATCAAGCTATGGCCTATACTTTATAGATTTGAAAGATCCA GCTTTGAGGAGGCAATCTAAGCTTTCTTCAGTGTGGTACTCAAATTTTCTGAACAATGGGAATATACCAAAGGTCACCAT CATGGACATTGAGAAGAATGCATCTGTGCTTTCCAACACTGTTACTGCATAA
Protein sequence (LotjaGi3g1v0194200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFQKHSSKEKKMRMLKVVFVLIHLLAAAVLANPLSKNDFPPHFLFGASSSAYQVEDAANEDGRKPSIWDTFVHAAGNAKI HRGDKDIGCDQYHKYKEDVKLMVKMGLDAYRFSISWSRLVPDGKGPINPKGLQYYNNLINELISQGIQPHITLHHLDLPQ ALEDEYGGWLRRRVVKDFTAYADVCFREFGDRVKYWTTVNEGNLFAFGGYESGLLPPQRCSPSSIPNCSRGNSSTEPYLV AHHILLAHASAARLYRKKYQDKQHGFIGLNLLTFGFVPLTKTSDDINATQRAQDFYTGWFLNPLIFGEYPGIMKKNAGSR LPVFTKRESNLVKGSMDFLGINFYYTFLVKNNPDSLRSEDRSFTADMAAELEYLTGNGSSTYEHPITPWILKEILASLKK DYGNFPVYIHENGQQTQRNSSLDDRPRVKYLCKYIGSLLDILRDGVNLRGYFVWSFLDMFEVLNGYESSYGLYFIDLKDP ALRRQSKLSSVWYSNFLNNGNIPKVTIMDIEKNASVLSNTVTA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 31 | 31 | - | – | |
| Phobius | 1 | 31 | 31 | - | – | |
| Phobius | 1 | 16 | 16 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 30 | 30 | - | – | |
| TMHMM | 13 | 35 | 23 | - | – | |
| Phobius | 17 | 27 | 11 | - | – | |
| PANTHER | 19 | 521 | 503 | 1.2E-267 | – | |
| PANTHER | 19 | 521 | 503 | 1.2E-267 | ||
| Gene3D | 25 | 508 | 484 | 1.9E-190 | – | |
| Phobius | 28 | 31 | 4 | - | – | |
| Phobius | 32 | 523 | 492 | - | – | |
| SUPERFAMILY | 32 | 497 | 466 | 2.3E-164 | ||
| Pfam | 36 | 499 | 464 | 2.5E-146 | ||
| ProSitePatterns | 43 | 57 | 15 | - | ||
| PRINTS | 335 | 349 | 15 | 1.1E-14 | ||
| PRINTS | 407 | 415 | 9 | 1.1E-14 | ||
| PRINTS | 424 | 435 | 12 | 1.1E-14 | ||
| PRINTS | 445 | 462 | 18 | 1.1E-14 | ||
| PRINTS | 469 | 481 | 13 | 1.1E-14 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi3g1v0194200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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