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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0195200 |
| Transcript ID | LotjaGi3g1v0195200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cytochrome P450 family protein; TAIR: AT2G45550.1 cytochrome P450, family 76, subfamily C, polypeptide 4; Swiss-Prot: sp|Q8VWZ7|C76B6_CATRO Geraniol 8-hydroxylase; TrEMBL-Plants: tr|A0A0S3SWF4|A0A0S3SWF4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0195200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:28396275..28398997) extracted from Lotus japonicus Gifu genome v1.2.
GAAAATAATATGTAAGAGAAAAAAAATGTGAATAAAAGTTCATTATTCGGGCCTCGAAGTTTTTAAGGATGATATAAAAT CATTTTACTTATTAAATGAAAGTTCATTATTTCAAGCACCAATTTTTTTTAGAAGAAGTTCCAATACAGATGAGCTTTGT CTTGTTCAATAAATGTAACGGCCATTCCACAAGATTTGACAAATCTGCAGATCCAGAGGCCTCTATATATTATTGTAACC CTCTCAAATCTCAATTTCCCTGTGGAAGCCTCAGCATCAATATTCAATAGCCATGGACTACTTGAAATTCATCCCACTAA TTTCCTTTGTATATGCATGCATCCACATCCTGTTCTCTAGCCTTAGCAGCAAAAACACAAAATGTCCCAAACTCCCACCA GGGCCTCCCTGTTATCCTATAATTGGAAACATATTGCAACTTGGCACATTCAAGCTGCACCAAGCACTCACCAAACTCTC CAAAAAATATGGACCTATTATGACTGTTAGAATAGGCACCATCACCACTGTGGTAATTTCCTCCCCAACCATAGCCAAAG CAGCACTTCACAAACATGACCAAGACTTAGCTAACAGATTAATACCAGATTCTGTCCAAGCACTTTCCCATGACAAAGCC TCTCTAATCTTCATGCCTGTATCAGCAAAGTGGAAAATCTATAGAAAAATCTGTGCCACCACAATCTTCTCTTCTCAGAA GCTTGATTCTACTCAATCCCTTCGCCGCGAAAAGCTAAGAGAACTGCTTGCTTACTTGCAAGAATGTTGCAAGAAGGGTG AAGCTATTGATATTGGTGAGACTGCATTCACCACAGTGCTTAACTCAATATCAAACACCCTTTTTTCCACTGACATGGCT AGCTACACCTCTGGTTCTTCCCAAAAATTTAGGAATGTAATTTCCTTGATGCTTGCGGAAGCTACAAAGCCGAACATTGC AGATTATTATACAGTCTTGCGTTGCTTTGATCCGCAGGGTGCGCGCCGGAGGATGGAAAACTATTACCAGACCTTGTTTA CACTTTTTGAGTCCATCATTGAAGAAAGAATTCAACAGAAAGATTCTACTGAAGGGGACGTGTTGGACTCATTTCTCAAT ATCACCAGAGAGGAAAACTCTGAAATAACACGCCATGATGTGTTGCATCTATTTCTGGTGAGTCTTTTAACTCTTAAGCT AACCAAATTCAAACTGTAGTTACTTTTCTAAGTCCATTATTATGAAGAAAATGAGAACATTAGCATCTATTTGGCTTATT TCTATTCTCTGCTTTCATGACTTGTTTTTAATTTTAAACAAATCTTTTGTCTACACTTTAATTTTCTCACCGACTTGATT CTTTTGTAAGACTGAGCATGGGCGAAACCATAAAATATGGGTAAAGGGAGCGAAAATTTAACATATAGTTGAAAGGGGTT ATATAAAAATTTTACAGGGTCAAAAATAACATTTGAATATTATTCTACTAAGGAAACTCATTTTCTTAGGGTGACCACCT CATTTTGCAACTACTTAGTAATGCCCATGAGACTATTGAGATTTGAGTGTGTTTGGTTTTCGTGGGAACTCCATAATCAA TTTTGGTTGAGCAAAATCAAATCTTGATGAAAATATTTGAGTCATTTTGAAGAATTTATTTGAGACTCAATAAAATTTGA TATAAGCTCGAGAGAGTAATTTATGCGTTAAATATAATCAATTGTGAGATTTACAATAAAATTTCGCCATATTACCTAAC AATTTTTGTTTTGTTTATAAATGCATATAAATATAAATCACTTTACTTTCAACTCACTATTATTAGTTTGTTTTTGGATC ATGGTTTCGCAAAATCGAGTTTACCAAAATCAAACTTTGTGGTGCAGGACTTATTTGTTGCCGGGATAGACACAACATCA GCCACAATAGAATGGACTATGGCAGAGTTGCTACACAACCCAGACAAATTGATGAAAACTAGGAAGGAACTTCAACAAGT CCTTGGGAAAAATGGAGAACCTAAAGATTCAGATATCACTAAGCTCCCTTACCTACAGGCAGTTGTGAAAGAAACCCTTA GATTGCACCCATCAGCCCCTATACTAGTCCACAAATCAGTGGCTGAGGTAGACATGTGTGGCTTCAGGGTACCCAATGAT GCACAAGTTCTGATTAATGTGTGGAGCATGGGACATGACTCAAGAATTTGGACTGACCCAAATTTGTTTCTACCTGAAAG GTTTTTAGAAAATGAAGAGGATTTCAGAGGAGAAGATTTGGGATTCATCCCTTTTGGAGCTGGTAGAAGAATGTGTCCTG GTATTCCACTTGCCTACAGAGTTGTTCATACCATGCTCGCAACACTCCTGTACCATTTTGATTGGAAGTTAGCAGATGGG CAAAAACCAGAAGCCATGGACATGGAAGAAAAATTTGGCATTACATTACACAAGGTCAAGCCTCTCATGGCTATTCCAGT CAAAGAATAGCAAATATGTATATTGATATGTGTGGTTAAAAAGATGGAGTTTTATTAAGTAGAAGCACCAGAATTATCAG GTCTTAATGATATTGGGATCTAGGACTAAATGTATGTAAGAAATAAACCAGAAAAATATGGAAGAGTTACTTTAATTACT TTCTTTTCCCTCTTCCATGATATATCTGTTTTTTCCCCTCTGTTCTCAATATTATGCTTGTTACACATTATAATAGATTT GCT
CDS sequence (LotjaGi3g1v0195200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACTACTTGAAATTCATCCCACTAATTTCCTTTGTATATGCATGCATCCACATCCTGTTCTCTAGCCTTAGCAGCAA AAACACAAAATGTCCCAAACTCCCACCAGGGCCTCCCTGTTATCCTATAATTGGAAACATATTGCAACTTGGCACATTCA AGCTGCACCAAGCACTCACCAAACTCTCCAAAAAATATGGACCTATTATGACTGTTAGAATAGGCACCATCACCACTGTG GTAATTTCCTCCCCAACCATAGCCAAAGCAGCACTTCACAAACATGACCAAGACTTAGCTAACAGATTAATACCAGATTC TGTCCAAGCACTTTCCCATGACAAAGCCTCTCTAATCTTCATGCCTGTATCAGCAAAGTGGAAAATCTATAGAAAAATCT GTGCCACCACAATCTTCTCTTCTCAGAAGCTTGATTCTACTCAATCCCTTCGCCGCGAAAAGCTAAGAGAACTGCTTGCT TACTTGCAAGAATGTTGCAAGAAGGGTGAAGCTATTGATATTGGTGAGACTGCATTCACCACAGTGCTTAACTCAATATC AAACACCCTTTTTTCCACTGACATGGCTAGCTACACCTCTGGTTCTTCCCAAAAATTTAGGAATGTAATTTCCTTGATGC TTGCGGAAGCTACAAAGCCGAACATTGCAGATTATTATACAGTCTTGCGTTGCTTTGATCCGCAGGGTGCGCGCCGGAGG ATGGAAAACTATTACCAGACCTTGTTTACACTTTTTGAGTCCATCATTGAAGAAAGAATTCAACAGAAAGATTCTACTGA AGGGGACGTGTTGGACTCATTTCTCAATATCACCAGAGAGGAAAACTCTGAAATAACACGCCATGATGTGTTGCATCTAT TTCTGGACTTATTTGTTGCCGGGATAGACACAACATCAGCCACAATAGAATGGACTATGGCAGAGTTGCTACACAACCCA GACAAATTGATGAAAACTAGGAAGGAACTTCAACAAGTCCTTGGGAAAAATGGAGAACCTAAAGATTCAGATATCACTAA GCTCCCTTACCTACAGGCAGTTGTGAAAGAAACCCTTAGATTGCACCCATCAGCCCCTATACTAGTCCACAAATCAGTGG CTGAGGTAGACATGTGTGGCTTCAGGGTACCCAATGATGCACAAGTTCTGATTAATGTGTGGAGCATGGGACATGACTCA AGAATTTGGACTGACCCAAATTTGTTTCTACCTGAAAGGTTTTTAGAAAATGAAGAGGATTTCAGAGGAGAAGATTTGGG ATTCATCCCTTTTGGAGCTGGTAGAAGAATGTGTCCTGGTATTCCACTTGCCTACAGAGTTGTTCATACCATGCTCGCAA CACTCCTGTACCATTTTGATTGGAAGTTAGCAGATGGGCAAAAACCAGAAGCCATGGACATGGAAGAAAAATTTGGCATT ACATTACACAAGGTCAAGCCTCTCATGGCTATTCCAGTCAAAGAATAG
Protein sequence (LotjaGi3g1v0195200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDYLKFIPLISFVYACIHILFSSLSSKNTKCPKLPPGPPCYPIIGNILQLGTFKLHQALTKLSKKYGPIMTVRIGTITTV VISSPTIAKAALHKHDQDLANRLIPDSVQALSHDKASLIFMPVSAKWKIYRKICATTIFSSQKLDSTQSLRREKLRELLA YLQECCKKGEAIDIGETAFTTVLNSISNTLFSTDMASYTSGSSQKFRNVISLMLAEATKPNIADYYTVLRCFDPQGARRR MENYYQTLFTLFESIIEERIQQKDSTEGDVLDSFLNITREENSEITRHDVLHLFLDLFVAGIDTTSATIEWTMAELLHNP DKLMKTRKELQQVLGKNGEPKDSDITKLPYLQAVVKETLRLHPSAPILVHKSVAEVDMCGFRVPNDAQVLINVWSMGHDS RIWTDPNLFLPERFLENEEDFRGEDLGFIPFGAGRRMCPGIPLAYRVVHTMLATLLYHFDWKLADGQKPEAMDMEEKFGI TLHKVKPLMAIPVKE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 16 | 16 | 5.0 | – | |
| Phobius | 1 | 5 | 5 | - | – | |
| Phobius | 6 | 24 | 19 | - | – | |
| PANTHER | 8 | 483 | 476 | 2.1E-96 | – | |
| Gene3D | 19 | 492 | 474 | 1.7E-127 | ||
| Phobius | 25 | 495 | 471 | - | – | |
| SUPERFAMILY | 35 | 492 | 458 | 4.71E-121 | ||
| Pfam | 35 | 484 | 450 | 4.0E-106 | ||
| PRINTS | 63 | 82 | 20 | 1.3E-44 | ||
| PRINTS | 289 | 306 | 18 | 1.3E-44 | ||
| PRINTS | 300 | 317 | 18 | 1.8E-12 | ||
| PRINTS | 309 | 335 | 27 | 1.3E-44 | ||
| PRINTS | 352 | 370 | 19 | 1.3E-44 | ||
| PRINTS | 353 | 364 | 12 | 1.8E-12 | ||
| PRINTS | 392 | 416 | 25 | 1.3E-44 | ||
| PRINTS | 428 | 438 | 11 | 1.3E-44 | ||
| PRINTS | 429 | 438 | 10 | 1.8E-12 | ||
| ProSitePatterns | 431 | 440 | 10 | - | ||
| PRINTS | 438 | 461 | 24 | 1.3E-44 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Iron ion binding | Interacting selectively and non-covalently with iron (Fe) ions. | ||
| Molecular function | Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced or incorporated into a donor. | ||
| Molecular function | Heme binding | Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi3g1v0195200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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