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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0217500 |
| Transcript ID | LotjaGi3g1v0217500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | O-fucosyltransferase family protein; TAIR: AT3G54100.1 O-fucosyltransferase family protein; Swiss-Prot: sp|Q8W486|Y1491_ARATH Uncharacterized protein At1g04910; TrEMBL-Plants: tr|K7K347|K7K347_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0217500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:32800133..32805167) extracted from Lotus japonicus Gifu genome v1.2.
AAAATAAATAAATTTCATTACATCTAAATAAGAAAATAACGGAGGGTGATTGAGTCATTTCATAATCATGTTGGAAACCC GATTGTGACATGAAGCAAACCCAGTATATAAAAGGGGAAAAAACACAAGAAAATGAAAATCAGAGATCACAGATTGGCAC ATTTAACGTTGCCACTCCCCTCGCTTAGATTTCGGTCCCATTCTCTCTCTCTCTGTTTCTTTCTCTGTAACGAACGCACC TTCTGAATCCAAACGCGACTCTCAAACCTTTAACTTCAACTGCAAAACCAACATCAAATCAAACATTCCATAAATCACTT TTGTTGAAATTGTTAATCCTCGTTTTGATTTGATTTCCTCATTCCGCCTCATCCATGTCGTCCGGGGGCCCCTCCACCAC CTCCGCCAACACCTCGCCGCGAGTCGCCGCTGGCCCCACCACCACCCGCCGCCGCGTCCCCGACAACACAACCACCACCT CCCCCGCCGTCGACGCCGAGAAGCAGCAACAACAACCGTCATCCAGCTTCTCCGATTTCTCAGAAACAGAGCAAGACGAC ACCGTTTCGCACAGTTACCATTTCCACCTCCACCCCGTCACGCGCTACCTCCTCCTCCGCGCCCGCATTCTCCTCTGCGT GCCGGAGTGGTTCTTCCTCCGCGCCGAGCATGTTTTCGTCTGGCTCGCCGGTTCGGTCCAGTCCTTCCGGTCCGGGAAAA ACGTGGGCCGGAAGATCCTCGCGCTGCTTATTTCCATGGTGGTGATGTCAGTTTTTTTGAAGGTTTCGCTCATCGGTGGC GGCGTTGATGTTAACCGGAGGAGAATCGAGAATGGGCAACTCATCTTGCAGCGGTTCAAGGAGGATTGGGCTTCCGCTCA GAGGGTGATCTCCGAGGCTGCCTCTTCAGAAACCTCCATGCCCAAAAGGGTCCTCGAGAGATTGGCTGTAAGTGATTCCT TTTCTCAAATCATTATTCTGCAGAATCACTTTTTTCTTCCTTCTCTGTGTTGCTCTTTAAAATTCCCTTTCTGGGAATCA GATTTTTACACCATTTTTTTCCCTTTTTACCCCTCTTTAGGCAACATTTTGGAGAAAAGGGTAGAGCTTGAAAAGAACTA ATTTGGTCTTTTTCTTTGATGATTGGGTGATTTGTTTTTTAGGCTTTTTTGGTTGTAAAGACTATTGATGATTGACCACA CTAGTTGATTCCAAGACTTTATAAAATACCAATTTATCAAATAATATTTTATTTTTTTATTCTTGAATCAGAATTAAGAA TTAGGAGTGCTCCTTAACTGGGTATTTTCCAATTATTTGATTCATATCATTGGTTTCCTTTACTGGGAAAAGGAGCTCAC GTATTGGACTAAAACAAAATTATTTGTGGCAAATCATTTGAAGTTCTAAATTTATTGTATTCTGGCTGGTTAGACGCATA CATAGAAGCACCCGCAGTCAAGAGATTAGTTATTGTTGTCGGTGGTGAATACCTTGAGATGATGACTAAAGGATTGATGA AAATGTTTGAACTAAATAACTTAGTGAATATTTTGATTAATTAAATAATATAACTATTGTGTAGATTAATTAACTACAAA TGAATTTTGAGTACCAAAGAGAAAACAGGGTTGGTGAAACCTGAAAGTGTGAATTCTATTGTAAAGGTCACGACATGAGT AATTGGAATTTTCCACTTTTGCAAAATTTTGACTTAATTGCTTATAGTCGTTGCCGACTGGAAAGTGCCAACCCGCGTGA CAAGGTGGCTCTGACCATAACGTTAGAGTTTGTGTTCTGTATGGCTTTTTGTGATTTTCTCACACGTGTTTCATTTTTGC CTTTTCATATTGCTTGTTGTTTTCCATGTTGTAATATAGTAGCCTATGTTACATGGATATTGAATTGTTCAAATTTGATG TGTTTAAATGGCTGCTTAGCTAAAGCAAAATCCAGGACTATTCCAATGAGTCCATACGCTGTGAAAAATCACGGTGATGT CAAAATCACGGCAGACAGAAATAATTTCCCTTAGCTTTTGCGATTGTCCACCATGACTTTGACCTTCCCGTGATTTTTTA CCGTGTATTAAAAAATGCACTAAATTGAGCTTTTGTACTGTGCTTGAGGATCTCACATTTTCTGTTTAGCACTCTAACTC GTATTTTTACTTATTTTGTTCTTATTCGGTTATTCCTATAGACTCCAGAAATATGGAAGAAACCAAACAGTGACAACTAC TACCAATGCATTTCTCGACACAGGAATCGAATAAGTAAGTATAATTTGCATTTGATTCATGTCAAACTTTACTGTGTGTA ATCAATTTTTGTCTCACTTGCTGTTATGCATTTCTTTCTTGCAGGGACAAAGTCAAAGACAAATGGCTATCTTCTTGTTC ATGCGAATGGTGGATTGAATCAAATGAGAACTGGGGTAAGATCAATGAAACATAATACTATACTCATGGATTTCTTTTCT GTAATTCTATAATTTGCTAACTCTCAGAACCTTCATTTGCTTGCAGATATGTGATATGGTTGCAGTAGCCAAAATAATGA ATGCCACACTTGTCCTTCCTTCTCTTGACCATGATTCATTTTGGACTGATCCAAGGTAAATTTCACTAAGTGTGAGTGTG ACATTAGTTTATCTCCTCATGTTACCACTTTTCCAAAATATAATGTCCCTAATATATTTTCAGTGACTTTAAAGATATTT TTGACTGGAGGCACTTCATGAAAGTTTTGAAAGAAGACATTGAGATTGTTGAGTATTTGCCGATCCAGCACGCATCTGCG AAACCTCTGGTGAAGGCCCCTGTTTCATGGTCAAAGGTGTGGAGAATCAAATAGTTCTATGTGCATTACATTGCAACCAT GTTCTCTCTTTTAGTGCAATAGTGGCTTAGATGTGCTTCATTTTGCAGGCTAGTTACTATAGAGGCGAGATTCTTCCGCT GTTGAAGCGGCACAAGGTTGTACAATTCACCCACACGGATTCCCGTCTCGCCAACAATGGCCTCGCTTCCTCTATTCAGA AGCTTAGGTGCCGCGCCAATTACCAAGCTCTCAGGTATACACCAGAGATAGAAGAGCTTGGGAGGACATTGGTGGATAGG CTGAGAAACAATAATGAACCATATATTGCCCTTCATTTAAGGTATATCACCTTGTGGACCTCGATTTCTTTCTCCTATTT TAGTCTTGTGAAAAGGGGTAGATGTAGGCCAGAAATAACTTTAGAAAATTTTATTAAAAATAACCTCATTGTCAATAATA TTCCACAAAATATTGTTTTTGATCGAGCTCAATATGATTTATATACCCAACCTAATTTACTGGGATAAGGCTTTTATTGT TGTTGCTGTTGTTGTTGTTGTTGTGCTTTTTGGGACCATCAAACTATTGCAGTTTGCTTACTTTCTTCCTTTCTTTCTTG CTTTACAATTAGATATGAGAAAGACATGCTTGCATTTACCGGCTGCAGCCATAATCTCACTGCAGAGGAGTCTGATGAAC TAAGGGTTATGAGGTATGAGGTCAAGCATTGGAAGGAAAAAGAGATTGATAGTGTAGATAGGAGATTGCAAGGTGGATGC CCCATGTCACCAAGAGAAGCTGCTGTTTTTCTGAAAGCCATGGGGTACCCTTCCACTACAACAATCTACATAGTTGCAGG ACCTATCTATGGCAGCAATAGCATGGCAGCATTCCGGTCGGAGTACCCTAATGTCTTCACTCATTCCACCCTTGCAACCG AGGAGGAGCTAGAGCCCTTCAAGCCGTATCAAAATCGTCTCGCGGCTTTGGATTACATAGTAGCCCTGGAAAGTGATGTC TTTGTCTACACATATGATGGAAACATGGCCAAGGCAGTGCAGGGCCATAGGAGGTTTGAAGGATTTCGGAAGTCTATCAA TCCAGACAGGTTTGTTGTTCATAAAACAAATTTACCACCCGAATTTTTCACTCTTCTAATGTTACTCACATATTTGACAT GTTTTGCTTGTTTTCAGATTGAATTTTGTTAGGCTGATTGATCAATTGGATGTGGGTTCCATATCTTGGGATGCATTTTC TTCTAAGGTGAAAAATTTGCACGCCGATAGGCTAGGGGCGCCCTATCCTAGACAGGTAGGAGAGTCACCGAGAACAGAAG AGAACTTTTTTGCAAATCCGTATCCCGGTTGTGTCTGCAACAAGTCTCAGGAGCTAATTACAAGCCTGAAACTAGACCAA CGATTCGGCATTGGAGCACAAAGATGATAGTATCTTGGTTTTGTTATATATGACTAGTGGGGTTTCATCTTGCACTATGC AACTGTCCTTGAAGTTTAAGGCAGATAGCTCATTCGGGTTGTGGAAGGAATGTGCTGATGAAAAATCAAAGATTTTTTGT ACAAGTTTCAGTTTAGGGCATACAAAAGGGGTAAGAGGAGAAGGTTTTTGTGTATAATCGAAAGGAAAATCACAGGTTAG ATATATTTAAACTGGGGATGTTGATATTGGGATTAACAATACCCCTATGGATGTGGTGGGAGAACAATGTCAAAACCATT CAGATTCATTGATTCTTTTTTTGAGGGACAAATGGAGCACAATTCAAATTTTGAATTCAACACATGGTACATAGGAATCT AGCTTCATACTTTGCAAGTTTGCATTACATATCTTGTTTATTCTTCATATTTATGTTGTTCCCTGAATTGCAGCCTACGT GTGTATAAATATTAATGATTTAGTTGATTTATTATTTTTCAATATTGTTGATTATCATGCTTGGTAAGCCAAGCCAAGGC AAGATGTTATTCTTCGTTCCTTCAAATGTTATGAAGTCGTCAATATTGAATCAGAAGTTGTTAATATTATCTGGAAAAAA ATTCATCTTCTATTCTATTACGTAATTTTATTTTAATTATCTTGATTGCTTAAAATGATATGTCCATCGTTGCTGCAGAA GTTGTATGAGTAAAGATGAATTAATCAACCAATTAATAAAATGGAATTGACTTTTTTGTTTCTGGCAAAGATTGA
CDS sequence (LotjaGi3g1v0217500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCGTCCGGGGGCCCCTCCACCACCTCCGCCAACACCTCGCCGCGAGTCGCCGCTGGCCCCACCACCACCCGCCGCCG CGTCCCCGACAACACAACCACCACCTCCCCCGCCGTCGACGCCGAGAAGCAGCAACAACAACCGTCATCCAGCTTCTCCG ATTTCTCAGAAACAGAGCAAGACGACACCGTTTCGCACAGTTACCATTTCCACCTCCACCCCGTCACGCGCTACCTCCTC CTCCGCGCCCGCATTCTCCTCTGCGTGCCGGAGTGGTTCTTCCTCCGCGCCGAGCATGTTTTCGTCTGGCTCGCCGGTTC GGTCCAGTCCTTCCGGTCCGGGAAAAACGTGGGCCGGAAGATCCTCGCGCTGCTTATTTCCATGGTGGTGATGTCAGTTT TTTTGAAGGTTTCGCTCATCGGTGGCGGCGTTGATGTTAACCGGAGGAGAATCGAGAATGGGCAACTCATCTTGCAGCGG TTCAAGGAGGATTGGGCTTCCGCTCAGAGGGTGATCTCCGAGGCTGCCTCTTCAGAAACCTCCATGCCCAAAAGGGTCCT CGAGAGATTGGCTACTCCAGAAATATGGAAGAAACCAAACAGTGACAACTACTACCAATGCATTTCTCGACACAGGAATC GAATAAGGACAAAGTCAAAGACAAATGGCTATCTTCTTGTTCATGCGAATGGTGGATTGAATCAAATGAGAACTGGGATA TGTGATATGGTTGCAGTAGCCAAAATAATGAATGCCACACTTGTCCTTCCTTCTCTTGACCATGATTCATTTTGGACTGA TCCAAGTGACTTTAAAGATATTTTTGACTGGAGGCACTTCATGAAAGTTTTGAAAGAAGACATTGAGATTGTTGAGTATT TGCCGATCCAGCACGCATCTGCGAAACCTCTGGTGAAGGCCCCTGTTTCATGGTCAAAGGCTAGTTACTATAGAGGCGAG ATTCTTCCGCTGTTGAAGCGGCACAAGGTTGTACAATTCACCCACACGGATTCCCGTCTCGCCAACAATGGCCTCGCTTC CTCTATTCAGAAGCTTAGGTGCCGCGCCAATTACCAAGCTCTCAGGTATACACCAGAGATAGAAGAGCTTGGGAGGACAT TGGTGGATAGGCTGAGAAACAATAATGAACCATATATTGCCCTTCATTTAAGATATGAGAAAGACATGCTTGCATTTACC GGCTGCAGCCATAATCTCACTGCAGAGGAGTCTGATGAACTAAGGGTTATGAGGTATGAGGTCAAGCATTGGAAGGAAAA AGAGATTGATAGTGTAGATAGGAGATTGCAAGGTGGATGCCCCATGTCACCAAGAGAAGCTGCTGTTTTTCTGAAAGCCA TGGGGTACCCTTCCACTACAACAATCTACATAGTTGCAGGACCTATCTATGGCAGCAATAGCATGGCAGCATTCCGGTCG GAGTACCCTAATGTCTTCACTCATTCCACCCTTGCAACCGAGGAGGAGCTAGAGCCCTTCAAGCCGTATCAAAATCGTCT CGCGGCTTTGGATTACATAGTAGCCCTGGAAAGTGATGTCTTTGTCTACACATATGATGGAAACATGGCCAAGGCAGTGC AGGGCCATAGGAGGTTTGAAGGATTTCGGAAGTCTATCAATCCAGACAGATTGAATTTTGTTAGGCTGATTGATCAATTG GATGTGGGTTCCATATCTTGGGATGCATTTTCTTCTAAGGTGAAAAATTTGCACGCCGATAGGCTAGGGGCGCCCTATCC TAGACAGGTAGGAGAGTCACCGAGAACAGAAGAGAACTTTTTTGCAAATCCGTATCCCGGTTGTGTCTGCAACAAGTCTC AGGAGCTAATTACAAGCCTGAAACTAGACCAACGATTCGGCATTGGAGCACAAAGATGA
Protein sequence (LotjaGi3g1v0217500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSGGPSTTSANTSPRVAAGPTTTRRRVPDNTTTTSPAVDAEKQQQQPSSSFSDFSETEQDDTVSHSYHFHLHPVTRYLL LRARILLCVPEWFFLRAEHVFVWLAGSVQSFRSGKNVGRKILALLISMVVMSVFLKVSLIGGGVDVNRRRIENGQLILQR FKEDWASAQRVISEAASSETSMPKRVLERLATPEIWKKPNSDNYYQCISRHRNRIRTKSKTNGYLLVHANGGLNQMRTGI CDMVAVAKIMNATLVLPSLDHDSFWTDPSDFKDIFDWRHFMKVLKEDIEIVEYLPIQHASAKPLVKAPVSWSKASYYRGE ILPLLKRHKVVQFTHTDSRLANNGLASSIQKLRCRANYQALRYTPEIEELGRTLVDRLRNNNEPYIALHLRYEKDMLAFT GCSHNLTAEESDELRVMRYEVKHWKEKEIDSVDRRLQGGCPMSPREAAVFLKAMGYPSTTTIYIVAGPIYGSNSMAAFRS EYPNVFTHSTLATEEELEPFKPYQNRLAALDYIVALESDVFVYTYDGNMAKAVQGHRRFEGFRKSINPDRLNFVRLIDQL DVGSISWDAFSSKVKNLHADRLGAPYPRQVGESPRTEENFFANPYPGCVCNKSQELITSLKLDQRFGIGAQR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 120 | 120 | - | – | |
| MobiDBLite | 1 | 57 | 57 | - | – | |
| PANTHER | 50 | 615 | 566 | 2.7E-289 | – | |
| PANTHER | 50 | 615 | 566 | 2.7E-289 | – | |
| Phobius | 121 | 144 | 24 | - | – | |
| TMHMM | 121 | 143 | 23 | - | – | |
| Phobius | 145 | 632 | 488 | - | – | |
| Pfam | 224 | 539 | 316 | 3.2E-76 | ||
| CDD | 224 | 545 | 322 | 6.44509E-165 | ||
| Gene3D | 350 | 551 | 202 | 1.6E-7 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0217500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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