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LotjaGi3g1v0218900.6

Overview

Field Value
Gene ID LotjaGi3g1v0218900
Transcript ID LotjaGi3g1v0218900.6
Related isoforms 5
Lotus japonicus genome version Gifu v1.2
Description Kinase family protein; TAIR: AT3G54030.1 kinase with tetratricopeptide repeat domain-containing protein; Swiss-Prot: sp|Q9FHD7|Y5126_ARATH Probable serine/threonine-protein kinase At5g41260; TrEMBL-Plants: tr|V7AQ93|V7AQ93_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0218900
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:32963282..32966740) extracted from Lotus japonicus Gifu genome v1.2.

ATGGGGGCTCGTTGCTCTAAATTCTCCTTCTGCTGGTTCCATTCCCACCTTAAACCTTCTGTCCTTGAATCCTCTGACCA AGGTTTATGTTGTTATCTTTTTGTTTTCAGCACACACACACACCCTTTTGGCTAGAACCTCTTGTTCCACTTAAAAATGC TATCTATATTGCAGAAAATGGTGGCAAGGGTGAAAAAATCTTGTGGCCTAGTTTTGCTGAGTTCAGCTTGGAGCAACTGA AGGCCGCCACAAATGGTTTCTCCTCAGAAAACATAGTCTCTGAGCATGGTGAGAAAGCTCCAAACGTGGTTTACAAAGGG AAACTTGAGAATGGACAGTGGATTGCCATCAAACGTTTCAACAAGTTTGCTTGGCCTGATTCTCGCCAATTCATCGTTTG TCACTTGCACTTTCAGTGCTTCATTTACTCTTACCATTCATGTATTTGGTTTCTTGTATTGAGCTTGATGTTGTGTTGTG TGTGGTTGTAGGAAGAAGCCACACAAGTGGGGAGCCTCAGAAGTGAACGTTTGGCCAATTTGGTTGGTTACTGCTATGAA GGGGATGAGAGGCTGCTAGTAGCAGAGTTTATGCCACATGAAACTCTGGCTAAACATCTCTTTCATTGTGGGTTTTTTGT GATCACTATAACTTTTTGCAACTATGTTAGATTAAATAGCATGTTTGGAAAACAGAATCAATTCTACTTGGTTGAAATTA ATTTAAACCCATTGAAGTTATGTTTGAATGTACCGGTAAAATTGATTTCATGGGTCAAGAATTGGATTCACTTACCACAA CATATAGTTTCTTATGCGCTGAACATATCAATTCTGAGATTTTTTTAATTGAATTTCATAATACTACCCTACAAAGCCCC CTTTTTCAAAAAGGTACCCCAACATAAATCATAACATTTAAACTCACGTTTGTCAGACGCAATTTAAGTAGAATCAGTTC TTTCCATAATCAATTCTGCTAACGCCTTATCCAAACACACACCGAGTCTTTCATTAAGTTTGTCTTTGGTCTTTGAATTC TGAACATGGGAAAAAATATATTATGGTTAACTTGGTGCAGGGGAGGCACAGCCTATGAAATGGGCAATGAGGTTGAGGGT AGCTTTCTACTTAGCTCAAGCTCTAGAATATTGCACCAGTAAAGGAAGGGGTTTGTATCATGATCTCAATGCCTATAGGA TCTTGTTTGATCAGGTATGAGGGCTTTGTATCATGATCCCAGTTGGATACGAAATAAAGAGCACTTATTGAAGCTTATAC ACCTAGAAAAATCACTGGATAAGCTCCAATATGTGCTCTTTGTTCCACATCCAAACGGGCTCTATATGCTTCAAGTTCCC TTTGTAATCGATCCTTGTTTCTTGCTTTTTATGTTGTATCAACAGGATGGCAATCCTAGGTTGTCTTGCTTCGGGCTCAT GAAGAACAGCAGAGATGGCAAGAGTTACAGTACTAACTTGGCTTTCACTCCTCCTGAGTACTTAAGAACTGGTATAGCTC TTAGGATGTTAGTGTGTGATGCATGGGAGCATGTCCTTGATCTTTGGCATAACTTTAATAAGAGAAATCTAGGAAACTGC TACAAATTCTCGAATTTGCATCAATTGCAGCCAACTACTCTCTACACCCCTCTGCAGTAGCAATACTACATGCTTTAAAT TATCTGTCAAAATGCATTTAGTCTTACATCCTCTTGTGCAAACATATTGCTTTGTTTAATTGTTCTGTTTTCAGTTTTAG GAATATTAAATTTTGGCTAAATTATTTGGATATTTATGTTGAAAATCATCTTGTAAAAGACATCTTTCTCTCTTTTTTTT TTCTTGTTTCATTACCCTAAGGTTAATACTCCTTTTGTATGGTCTCTCTCAAATAGAAAGCATGTTGAGAGAAACGTATG TGGAATCAGTCTGCATATGCTTGCATGGATTGGTATGTGACAATTTTATTTTTTTGTACATTTGACCTTATATGCAGGTA GAGTGACGCAAGAGAGTGTGGTTTACAGTTTCGGAACCCTGTTGCTAGACCTCTTGAGTGGTAAACATATTCCCCCAAGC CATGTAAGTTTTAATTTCTATCCATTATTAAGTCCTGAACAAACTCTAATTTATGTTCAGACCATTGATTTTAGACAAGA ATGTTAATGGCTGATATAATTGCTTAAGAATACACATTCAGCATGTAGCAGTAGGACATATTGTCATTTACATGTAAATC ATCATTAAGAAATTTTGTATTGCACTTGCTCACAAAATGATCATTGGTACTAAACAGTTTATAAGTGTGTGTCCACCAGT TGAGATAATGTGAAATCACAATCATCCTAATTCAAAAGAAGAGTTTCGCTCACTTTTTACCTCAAAGTAGTGCTAAAGCA TTAGCTCTGGTGCCAACGGGTAGTCACTTGAGATTCTTCTTAGAGATGTGGTAAATTTGATGAAGTGAAAATATTTTATA TTTGCTGCAGAATTCACTTCTCTTCATTTGCAGGCACTGGACCTGATACGTGGCAAAAACTTTTTGATGCTGATGGATTC TGCCTTAGAGGGTCACTTTTCAAAAGATGATGGAACTGAGTTGGTTCGTTTGGCTTCGCGCTGCTTACAGTATGAAGGTC GTGAGAGGCCAAATGCAAAGTCCCTTGTTGCATCTCTTATGCCACTTCAGAAAGAAACAGAGGTATCAAAGCATTGATAT ACAATAACAGATCAATTAGACCTATTATCTATACACAAGCAATTACCAAAGCTTATCATGCATGGTAATGCTAAACATGT AATTTGGAATGAGTGCATGATCAACTTGATCCTTGAAAGATTCTGCCACTGGAAAGTTAGTCCCCGGAAGAAAGAAATAC ATTTGAAAGTCTCTGAATGTGTAAAACGTCAGTCAAGCTAGTCCATACGGTTTTGTCAACTAAAAGGTCAGTCAAGTTAG TCCCTACACATTCAGGGACTTTCGAATGCATTTCCTTCTTTCAGAGACTAACTTTCCAACGGAAAAATCGTTAAGTACCA AATTGACCATTCACTCAATTTGGAATAGGAAATGTTTACATATATTTAACTACTATAGTACTATACTTGTGTTGAAGAAA TGTGAGAAGTGTGATACCTATCTTAGGAAGACTAAAACTTCTCCTTTGAACAAGCAGGTCCCTTCATATGTTCTGATGGG TCTCCGGAATGAAACTGCATCCTCAACAAAGCCAGTATCATTGACACCTTTTGGTGAAGCATGTTTGAGACTGGATCTAA CTGCCATACATGAAATATTAGAGAAGACTGGTTACAAGGATGATGAAGGAATTGCCAATGAGGTTTGCCCATCTTCAACT TATACAAGAGGGTTTCATCTCACTTAAATACGATATAAAATAAAGGCAGTGACTATTTGCGCCTCCCCGTTTTACTAAGT CCGCCATCTCCTTTTTTAA
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0218900.6) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGGGGCTCGTTGCTCTAAATTCTCCTTCTGCTGGTTCCATTCCCACCTTAAACCTTCTGTCCTTGAATCCTCTGACCA AGAAAATGGTGGCAAGGGTGAAAAAATCTTGTGGCCTAGTTTTGCTGAGTTCAGCTTGGAGCAACTGAAGGCCGCCACAA ATGGTTTCTCCTCAGAAAACATAGTCTCTGAGCATGGTGAGAAAGCTCCAAACGTGGTTTACAAAGGGAAACTTGAGAAT GGACAGTGGATTGCCATCAAACGTTTCAACAAGTTTGCTTGGCCTGATTCTCGCCAATTCATCGAAGAAGCCACACAAGT GGGGAGCCTCAGAAGTGAACGTTTGGCCAATTTGGTTGGTTACTGCTATGAAGGGGATGAGAGGCTGCTAGTAGCAGAGT TTATGCCACATGAAACTCTGGCTAAACATCTCTTTCATTGGGAGGCACAGCCTATGAAATGGGCAATGAGGTTGAGGGTA GCTTTCTACTTAGCTCAAGCTCTAGAATATTGCACCAGTAAAGGAAGGGGTTTGTATCATGATCTCAATGCCTATAGGAT CTTGTTTGATCAGGATGGCAATCCTAGGTTGTCTTGCTTCGGGCTCATGAAGAACAGCAGAGATGGCAAGAGTTACAGTA CTAACTTGGCTTTCACTCCTCCTGAGTACTTAAGAACTGGTAGAGTGACGCAAGAGAGTGTGGTTTACAGTTTCGGAACC CTGTTGCTAGACCTCTTGAGTGGTAAACATATTCCCCCAAGCCATGCACTGGACCTGATACGTGGCAAAAACTTTTTGAT GCTGATGGATTCTGCCTTAGAGGGTCACTTTTCAAAAGATGATGGAACTGAGTTGGTTCGTTTGGCTTCGCGCTGCTTAC AGTATGAAGGTCGTGAGAGGCCAAATGCAAAGTCCCTTGTTGCATCTCTTATGCCACTTCAGAAAGAAACAGAGGTCCCT TCATATGTTCTGATGGGTCTCCGGAATGAAACTGCATCCTCAACAAAGCCAGTATCATTGACACCTTTTGGTGAAGCATG TTTGAGACTGGATCTAACTGCCATACATGAAATATTAGAGAAGACTGGTTACAAGGATGATGAAGGAATTGCCAATGAGG TTTGCCCATCTTCAACTTATACAAGAGGGTTTCATCTCACTTAA
Download CDS Sequence

Protein sequence (LotjaGi3g1v0218900.6) extracted from Lotus japonicus Gifu v1.2 Proteins.

MGARCSKFSFCWFHSHLKPSVLESSDQENGGKGEKILWPSFAEFSLEQLKAATNGFSSENIVSEHGEKAPNVVYKGKLEN GQWIAIKRFNKFAWPDSRQFIEEATQVGSLRSERLANLVGYCYEGDERLLVAEFMPHETLAKHLFHWEAQPMKWAMRLRV AFYLAQALEYCTSKGRGLYHDLNAYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTQESVVYSFGT LLLDLLSGKHIPPSHALDLIRGKNFLMLMDSALEGHFSKDDGTELVRLASRCLQYEGRERPNAKSLVASLMPLQKETEVP SYVLMGLRNETASSTKPVSLTPFGEACLRLDLTAIHEILEKTGYKDDEGIANEVCPSSTYTRGFHLT
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR45863
1 374 374 2.3E-243 –
PANTHER
PTHR45863:SF6
1 374 374 2.3E-243 –
Gene3D
G3DSA:3.30.200.20
33 134 102 6.7E-29 –
SUPERFAMILY
SSF56112
35 319 285 8.97E-45
IPR011009
ProSiteProfiles
PS50011
59 314 256 20.838
IPR000719
Pfam
PF07714
72 310 239 3.9E-25
IPR001245
Gene3D
G3DSA:1.10.510.10
136 328 193 3.8E-43 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0218900.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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