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LotjaGi3g1v0230500.2

Overview

Field Value
Gene ID LotjaGi3g1v0230500
Transcript ID LotjaGi3g1v0230500.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Uracil phosphoribosyltransferase; TAIR: AT3G53900.2 uracil phosphoribosyltransferase; Swiss-Prot: sp|P93394|UPP_TOBAC Uracil phosphoribosyltransferase; TrEMBL-Plants: tr|I3S7F3|I3S7F3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0230500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:36086264..36092728) extracted from Lotus japonicus Gifu genome v1.2.

CAAAAATGAATGAACTAATTTTTAGCTTTGAGTAAACTGGTTTAGACCCGTGTTCTACTTATCTATGATAGATCCATTTA TCCATTTAAGCCAAGGCCTCAAATCTTGCAGCATATCCTCTTCTTTTCTCTCCTCAAGGACCTTCCTTGAACTCTAAATT CCTGGGATTGCATTCATGGCTTGGTGCCGCATTCATTGCAACCTTAATCCCCTGTTCCCGTCCGATGCGGCGCCTTTTCC GTCCACATGTCACTCTCACTCTCACTCTCACTCTCACCTCTCACTCACTCCTCGAACTTTTCCTCCTATTAATTCTCTCT TCACATCAAGAAAGGCAATTTAATATTTCCCATTAATTATTTTAATTACATCTATTTTGTTTTTTCCTTTTTGGTTTGTT ATGATTTGATTCTTGTTGTGTATATATACCCTTTTGTAACGCTTATTCATTTGTCTTTCCGCACTTAGATCACTTTTTCC AGTGCTCAGCGCCGCACTTTTGGGGCTGTGAGCTCACACATGACCATGGAGGAGAAGCCCATCTCTGCTGATCGAATGCT CGTTTGTTTTCTTATCTTCTTCTTGTTTTGCATTCTGGGTTTCATGGGGTTTTGCTCTATTTGATCCTGAGGGAAAAAAA GTTTTCTTTTTTGGTGATTAATCTGTGGTGGTTTAATTGGTTGATTAATCTGTTTATTGGGTTTTGGGGTTATGAGTTTT TGCTCTGTTTGATCCTGAGAAACAAAATGGAGGGAGATAAAAAATAATCTTTTTGGTGATTCATCTGTTGTGACTTAATT GGTTGAGTAATCTGTTTATTGGGTTTTTGGCTTCTGGGTTTATGGGTACATTTTTTGTTATCCTTTTTGTTTTGGTTTCT GGGTTTAGAGGCTTTTGGCCTGTGTGGTTCAATGGAACAGAAAATAGGAGAATGGAGCTAAAAGATTTTATTTTTAGGGT GATTTATCTGTGATGGCTTGTTCGGTTGATAATGTTGTTTGTTGGGTTTTTGAAGGTGTATGTGCCTCCACATCCGTTGA TCAAGCACTGGGTTTCAGTTTTGAGGAATGAACAAACTCCTTGTCCCATCTTCAGTGAGTGAATAAGTTTATTTTTACAG TCAATGCTGAACATTGACTTTGTTCTACTGCAATCAACTTAGAAACAGCTTCATCACTTTAATTAACTTAAATAGCTACT TTCCTTTTTAATGGTTAATGGTATTGTTGCTTCTTGACAAGCACACCCAACTGGGAGGTTTGATTGAATTTGATAAGGTT TAAGTATTGTTGAACTGTTGATTGAGGGATGTTAGTCATGTTACTAAGTGTGGGAAGAGTGCATGCTTTATTACTACCAA CATTTAATCTTATTTGAATGGCTTAGTGGGGAGTCTGCTTGGTTGTTTTTCAAATTTCATTGTTCACACTCAAACTTATC TTCTACTCTGTTATTACTAGTAATTTTCATAAAAGAAAATCATGCCATTAAGTATGTTGATGGGAACTTTGAACTGGAAC AACTTAATTTGAGCATCTTGATTATTTTCAAGGGATAGACTTCTGACTTCTGAGCATGTAGTATCAATATGTCTTCATAG AGAATCTGGTTTTCCTTTAACCTGAGATTCTTTTGTTTAAAAAACAAAACTAACTAAACTTTAGGTGGACTTGGCTTGAA TTGTGGTATATGACGGTTGATTTGAAAGTTGACACGTGGTTTTTGATACTGTAGAAAATGCAATGGCTGAGCTGGGAAGG TTACTTATGTATGAAGCTTCAAGGGATTGGTTGGTTAGTTCACGTCTCTTCGATAATTCTCATATGTTTCACCTTTTCTT TTTCCTGCAATATAATTTAACTTTGTTGCAATATTGTTTTTATTATCTAATTATAAAAGCTGACAAATTCAAGCCATGGG TTTTCATATGTACGAGGGCAAACCAAAAGGGAATAGGTTTTAACTTTATTTAGCATTCCAAAGAACTAATATAATTGATC CAAATTTTATTTTTCTTTCCATGTCTATCTAAATGTGTCCTGAGGTATGTGGAGTATCAAGTTTGTTCCAGACTTCTAGT TGTCTTGCTCTAGTAGCACAATCAAATGACTTTTAGGTTAGGGTTATGAACTTATGATGTGTGTGTGTGTGATGGTAAAA TGTTCATAAATGGGGGGGAGTAGAAGGCTCATAGGGGGGGGTATCTGAGGGCAAAGATGGCTCTGAACCCTGGGTCAAAT TGAATAGGTACCTAGCTAGGCTACGGTGGAAAATACCTGTGGAATCTTTGGTTGTTGCTTGTTAGGTGATAGGTCTATTG GTAAATTAACATAAGAACTGATTAGCATTTTAAGAAGGATAGAATTCTTGAAGTAGATTAAAAAACTAAGGAAAATAGTA GAGGTTCAGAAGATTACAGATTTAATCTTGGTTAGGCATGACGCATAATATATTTCATATAAAAGAGACCGAGTAAATAA CACCATCTTAATAAAGGAGAATCAAGTTTTTAAAATTCTGCCTTGTGGCTGGTCTTCCTTCTGATTTTAATACCTTTTTT TGAACAAGAACAATAACGAATAAATGTTATATTTTGAAACAGCATGTACATTATTGCATTATACTATATAAGAATTACTT CAAAAGATAACAAACCTGGGCTTTAACTAAATCAGTATTTGACGATCTAGCTAAATGCAGAATTTAGTACACCCCCCTAA TTTAGAATTCAAATCATAAATCTTTTTCTTCAACTCAGCTATCTGAGTTTCCCAGTTTACTCTCTCCTTGTTTTGTGTTT TGCCTGAGTTTCACACTTACGTCTCTAAAGAACGTATCTGGATTTTCATATTCCATGTGCAGAACAATACATTGCCAAAC ATTTAGATTTTCAATTTATTGCATATTCAATAAAATTTGAATCTTCATTTATCCTTTTTAAGGAAAATTTCATCAATACC TTGCTACAAAATCTTGAATTTTATAGTTATTTCTTTTTATAAATGTAGTTCTTAATAGCCAAAAGTTGTCGAAAACTGTC CAGGCAATGTTATTCTTAAAATTAAGCTTTTCTTAAATGCTCTTGTCTGTTGCACCACTCTCTATGAGACAAGAATCTAG AACTTGGTACTGATTACAAGTTGTGGTGATGGCTTGAATTAATTGTTTAAATTTTTGATGTTGTTTGATATCTCCATCCG ATAATTTTGTCCTCCTATGGGCAGACTATTGTTCATTGATATACATTTTTATTCTTTTCTTCTTTGTTTTCATTGTTTTC AGCCCACTATATCTGGAGAGATTCAATCACCAATGGGTGTTGCCTCAGTGGAGTTCATTGATCCAAGGGAGCCTGTGGCT GTTAGTAACATACTGCTCTCACTATGTTTGGAATTAAATATATATATATGTATATATATATATATATATATATATATATA TTCAGGAGTTCTTATGGCCTTTTAGTTACATACTTCCATTCTGCATATAATGATTGATATTTTCTTTACTACGCTCCCCA AACTTGCTTTTAAATGGATCAAACATGAATTTGTTAAAAAAATATCATATTTGGTTGTAATATACTAAAATCAGTTCTGT TTCTAAAAGAACATGTAACTAGAAGTAAGGAAAAGTAGCTTGTGTTAGGTTGAATTTTTTCACTGTTTACTACAAACTTA CTTTTAAAATAAAAACATTGAAACACAAATCACTTCACCTGAAACTCAATTCCAAACAAAATCAAATTTGCAAAATCAAT GTCTCGTATAAAATCAATTCTGCAGATGCCCACTCAGACACTCAATTATACTAAATTGTGAAGCATTTCAAAGATATATT CAATTCACGTAACCAAATCCATGTTCATATTTTTGGTGATCCTACAATGCTATTAATATTGTTCATTGCTTTCCAAAATA AAGTACTTTAGGGGTCTTATCAATTTGGTTGTGTAAGTGCCTTTGTACAAACAATGATTTTTTACCAGATTTTCAGGTAA TTCCAATCTTGAGAGCCGGTCTTGCGCTTGCCGAACATGCATCATCGATCTTGCCCGCAACAAAAACCTATCATCTAGGT ATTGATACTTGTGCTAGTTATCAATTTAAGAGGATGCAGTCATGCAAATGTTTGTTACTCATTGTTTGGTACTAGTTCAT TTTAATAAGATGATGGCTTGTTTAACAATAGTTACTTCTATGAATGCACTTATGTAAACCTAGAATACATTTCTTGTTCG TTTCCTAAATTGATTTTTTTTTTGCTTCATTTGAGCAGGATTAAGCCGAGATGAGGAAACACTTCAGCCAACTATATATT TGAACAAGTAAGAAATCTATATTTGAAAGAGAATGTTTTTTCTTAGCTGTTTTTCTTTTCTTGACGCTGGCATGGCTTGT TGAAGATGCAGCTGAGATCCATAAAGTCTCACCAATGCTTCTCTTACTTTTGGCTTGTTATACTGAATGCTAAAGACGCG GCTGAAATCATAAGATATTGCTTGTTACACACTCCTATTTTTGTTTTCCAGGTTACCTGACAAATTTGCAGAAGGATCTA AAGTATTTGTTGTTGATCCTATGCTAGCAACAGGTACGTGCAGTTAGATGTGTGGGAGTTGAAAGTTAGGGGTGTTTTAC ATATTGAATTGAGTTGTCTCACAGTCAAATTCTTTGTGTTTGTATAATGATTACTTTAAGTTAAACGCTAACAGAGGCCA GAACCTCCTTTCACGTTTTTTGCACAAAAGAGATCACCCTAGCATGCACAAAAATATTTTTTTGCAAGGTTGCACAAGGG CCATTTGACCTCCTCCCACATATTATCTGGTTTTTATGGAATTTTGAATTAAAAAATTAATGTGTTTCAACTTTTGGCCC AAATTTATTCTAAATTATGTTAGGACCCCACCTCTACCCCACCACTTCGCCACCCCTCTCCATCACCCTCCCTCCCGTCA ACCTCCTCCCTCTGCCATAACCACGTCCACCTCCTCTCCACCCCTCCGCGTTAACCATGGCCACCCCCTTTGATGTTCTT TGTCCCACAACTGATAGCCCAACAATTCTTTTGAAAAAACTCAGTTGGAAAAACTCATCTTTCGGCAATAAGGTCCTCAG AGAATGGCAGAGGCCGAGGAGGTTCAGTGGAGGGAGGGTGGTGGAGAGGAGGTGGAGGAAGGGAGTTATGAGAACACTTT AAGTGGCAGATGGAAAGACTCTCCCATAAAGTGTTCTCATAACTAGCATGAGCGTTATCATTACTTTAAGTGTTCTCATA ACTCATGTTATTATTTATGATTGAGATTTTGTTTTCCTTATGAATTGCAGGTGGTACTATTGTGGCAGCCCTGAATCTCT TAAAGGATCGTGGGGTTGGCAACAAACAAATTAGAGTGGTAGGGAATAGTTTTTATATTCAGAAGCTAGAATGCTTAATA ATCACAATTCTCATAATATTATTAATTCAATGTACTTTGTTTTTGTGTGCTTAATTGGTTTAGTTTAGCAATGAGTAAAA AACCCCAGATTCTTCTTTATGCATTATGCCATGCATGATATGTTTTGTAAAATTTGCTACATTTTTGTGATTGAAATTGT CAATACTCATGCATACATGTGCAATCTAATTCTCTTATCAATTGTCTAGTAACATGATTCATGGCAATGCAGATATCTGC TGTAGCTGCCCCTCCGGCGCTTCAAAAGCTGAGCGAACAGTTCCCTGGGTAGTCTCAAAAACTTCAAATCTATTCACTTA CTTTGAAGCAATGGGTTCTAATCATAACATTTTACAGGCTTCATGTGTATACTGGAATAATTGACCCTACCGTTAATGAC AAAGGGTATGTTCCTCCCAACATTATAATTCAATTTAATTGTTTATTGGTAGTTAGGTAATGCAGAGAATCACGTCATTG TTGAATTTACATCTCTTGTGTAGGTTTATAATTCCTGGTCTTGGAGATGCTGGGGACCGCAGCTACGGTACATGATGATA CATGAATATTCATTTGCTTAATCTTTTTATCAAGTGGCCCGCGTTAGGGATTTTGGTTATTGTTAATTGAAATGCATGTG TTGAAACTCCTAATGCGAGAATTGGCAAGTATCTAAAGTTTGTACTAGAATCTAGTATTCCAATCATTTGATTATTAGAT TTTTTTTTGGGTCTGTTGATCATTAGAATTCTTATTCTTTTATTGAGGGATCTTCATCCTCAAAGATTCATAGAATTTGA TTCATGCAAGAAATGAGGGATTATTTTTTACACATTCCTATTGTTCACACATTCTTAGGTTATATTTTTATGGCTTAATT GCAACTTTGGTCCCTGACATTTATAAAAGCCACGATTTTGGTCCCTCACCTAATTTAATTACAAAAATCGTCCCTCACCT AACACTCTGTGAACAAAGTTGGTCCGACCGTCAATTTTTTAACGGAAGAAGCTTATGCGGTGTTT
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0230500.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGACCATGGAGGAGAAGCCCATCTCTGCTGATCGAATGCTCGTGTATGTGCCTCCACATCCGTTGATCAAGCACTGGGT TTCAGTTTTGAGGAATGAACAAACTCCTTGTCCCATCTTCAAAAATGCAATGGCTGAGCTGGGAAGGTTACTTATGTATG AAGCTTCAAGGGATTGGTTGCCCACTATATCTGGAGAGATTCAATCACCAATGGGTGTTGCCTCAGTGGAGTTCATTGAT CCAAGGGAGCCTGTGGCTGTAATTCCAATCTTGAGAGCCGGTCTTGCGCTTGCCGAACATGCATCATCGATCTTGCCCGC AACAAAAACCTATCATCTAGGATTAAGCCGAGATGAGGAAACACTTCAGCCAACTATATATTTGAACAAGTTACCTGACA AATTTGCAGAAGGATCTAAAGTATTTGTTGTTGATCCTATGCTAGCAACAGGTGGTACTATTGTGGCAGCCCTGAATCTC TTAAAGGATCGTGGGGTTGGCAACAAACAAATTAGAGTGATATCTGCTGTAGCTGCCCCTCCGGCGCTTCAAAAGCTGAG CGAACAGTTCCCTGGGCTTCATGTGTATACTGGAATAATTGACCCTACCGTTAATGACAAAGGGTTTATAATTCCTGGTC TTGGAGATGCTGGGGACCGCAGCTACGGTACATGA
Download CDS Sequence

Protein sequence (LotjaGi3g1v0230500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MTMEEKPISADRMLVYVPPHPLIKHWVSVLRNEQTPCPIFKNAMAELGRLLMYEASRDWLPTISGEIQSPMGVASVEFID PREPVAVIPILRAGLALAEHASSILPATKTYHLGLSRDEETLQPTIYLNKLPDKFAEGSKVFVVDPMLATGGTIVAALNL LKDRGVGNKQIRVISAVAAPPALQKLSEQFPGLHVYTGIIDPTVNDKGFIIPGLGDAGDRSYGT
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10285:SF160
1 223 223 2.6E-112 –
PANTHER
PTHR10285
1 223 223 2.6E-112 –
Gene3D
G3DSA:3.40.50.2020
8 224 217 9.6E-71
IPR029057
TIGRFAM
TIGR01091
15 224 210 1.2E-68
IPR005765
SUPERFAMILY
SSF53271
15 223 209 1.84E-61
IPR029057
Pfam
PF14681
17 224 208 2.0E-67 –
CDD
cd06223
80 200 121 3.84188E-17
IPR000836

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004845
Molecular function Uracil phosphoribosyltransferase activity Catalysis of the reaction: diphosphate + UMP = 5-phospho-alpha-D-ribose 1-diphosphate + uracil.
Subterm of
GO:0006223
Biological process Uracil salvage Any process that generates uracil, 2,4-dioxopyrimidine, from derivatives of it without de novo synthesis.
Subterm of
GO:0009116
Biological process Nucleoside metabolic process The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (a ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleoside), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine).
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0230500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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