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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0231700 |
| Transcript ID | LotjaGi3g1v0231700.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Dof zinc finger protein; TAIR: AT3G55370.2 OBF-binding protein 3; Swiss-Prot: sp|Q9M2U1|DOF36_ARATH Dof zinc finger protein DOF3.6; TrEMBL-Plants: tr|A0A0L9VTD2|A0A0L9VTD2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0231700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:36353268..36354655) extracted from Lotus japonicus Gifu genome v1.2.
TTGCAAACATCATGTTATACGAAGAACGTTCTATCTAAAATTATTAATTCAAAAGTAATATTGCATCTATTTGGATTTGT AAATGATTCTTGAATATACCATATATTTGATTTCTTTGCTTTATTAATCATTGTTTTCATTTCACTCTTCTCATTTCCTT CTTATTTTATGTTCCCTGCAGCAACCAAATCATCAACCTGGAAACAACAATTCCACCTCTCAGCAGCGGCTTCCTCCACC GCCTCCACCTCCACCACCACCCCATGGAGCCGGTGGCACCGGCTCAATCAGGTGGGAATGGATAGCAGAGAGAGCAAGGA TGGCCAACAGGCCTAAGCCGGAGACTGCACTGAAATGCCCACGTTGCCATTCCACCAACACAAAATTCTGCTATTATAAC AATTACAGCTTCTCTCAGCCACGCTACATATGCAAGGCCTGCAGTAGGTACTGGACCAGCGGGGGCACCTTGAGAGACGT CCCCGTCGGCGGCGGCTACCGGAAGAACAAGAGAGGCAAAGTAGGCAGCAGCAGCAGCACCATGAAGTCCCCGGCGAGCT CTGACCGCCAAACGGGGAGTACTAGTTTTAACAAGTCTGTGTCCTCCACCGGTGGCGGCCATGCTGAAGGCCTCTCTCCC CAGGTGCCACAAGTGATGTTCATGGCTCCGTTGCATCATCAATTCTCGGAGTTTGGAAGTGGAGATATGATGGGGTTAAA CTATGGCCTCAGGTATTGCCCCATTTCCGGTCCAATGGGAGGAGGAATAGGGGACCTTGGTTTCCAGATAGGAAGTGGTT TAGGTGGTGGTGGCGGCAACCATGGTGGCGGGGGTGGTGTGCCACAAATGCAGCAATTCCCTTTCTTGGCTGGTTTGGAA GGTTCACTGGTTGGTTTGTACCACCACCCTTTTGAAGGCAGTGTTCATCATCATGAGGTAATTGGATATGGTTCCGGTGG TGGTCATGGGGTGAGCCATTTGAGGCCAAAGGTTTCAACTTCTGGGTTGATGACTCAATTTGCTTCAGTGAAAATGGAAG GTAGTAGAGAACTTAATAATTTGTCAAGCCCCTTCTTGGGGACCAATAATATTAATCCCCCAAGTGAACAATATTGGAGC GGTACTAATTCTGCAGATTGGACTGATATTATTGGTTTTAGCTCTTCTTCTACAACTAGCAACCAAATGTAGAGTTTTTC AGATTCTGTGAAGCTTCAGCTGGTACTTTTGATTAGTATGGCTTTCATTAACCTAGCTAAGACATGAATTCTTATCCAAC TCCTATGAAGTGCTTTGAGATGAATGGTTATGTATGATGAGTGCTTTTTTTAAGTTTTCGTGTATATATATCTTCATGAC TCACTTGCTAGTCAAATTGAGCTATGGG
CDS sequence (LotjaGi3g1v0231700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCAACAGGCCTAAGCCGGAGACTGCACTGAAATGCCCACGTTGCCATTCCACCAACACAAAATTCTGCTATTATAA CAATTACAGCTTCTCTCAGCCACGCTACATATGCAAGGCCTGCAGTAGGTACTGGACCAGCGGGGGCACCTTGAGAGACG TCCCCGTCGGCGGCGGCTACCGGAAGAACAAGAGAGGCAAAGTAGGCAGCAGCAGCAGCACCATGAAGTCCCCGGCGAGC TCTGACCGCCAAACGGGGAGTACTAGTTTTAACAAGTCTGTGTCCTCCACCGGTGGCGGCCATGCTGAAGGCCTCTCTCC CCAGGTGCCACAAGTGATGTTCATGGCTCCGTTGCATCATCAATTCTCGGAGTTTGGAAGTGGAGATATGATGGGGTTAA ACTATGGCCTCAGGTATTGCCCCATTTCCGGTCCAATGGGAGGAGGAATAGGGGACCTTGGTTTCCAGATAGGAAGTGGT TTAGGTGGTGGTGGCGGCAACCATGGTGGCGGGGGTGGTGTGCCACAAATGCAGCAATTCCCTTTCTTGGCTGGTTTGGA AGGTTCACTGGTTGGTTTGTACCACCACCCTTTTGAAGGCAGTGTTCATCATCATGAGGTAATTGGATATGGTTCCGGTG GTGGTCATGGGGTGAGCCATTTGAGGCCAAAGGTTTCAACTTCTGGGTTGATGACTCAATTTGCTTCAGTGAAAATGGAA GGTAGTAGAGAACTTAATAATTTGTCAAGCCCCTTCTTGGGGACCAATAATATTAATCCCCCAAGTGAACAATATTGGAG CGGTACTAATTCTGCAGATTGGACTGATATTATTGGTTTTAGCTCTTCTTCTACAACTAGCAACCAAATGTAG
Protein sequence (LotjaGi3g1v0231700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MANRPKPETALKCPRCHSTNTKFCYYNNYSFSQPRYICKACSRYWTSGGTLRDVPVGGGYRKNKRGKVGSSSSTMKSPAS SDRQTGSTSFNKSVSSTGGGHAEGLSPQVPQVMFMAPLHHQFSEFGSGDMMGLNYGLRYCPISGPMGGGIGDLGFQIGSG LGGGGGNHGGGGGVPQMQQFPFLAGLEGSLVGLYHHPFEGSVHHHEVIGYGSGGGHGVSHLRPKVSTSGLMTQFASVKME GSRELNNLSSPFLGTNNINPPSEQYWSGTNSADWTDIIGFSSSSTTSNQM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 290 | 290 | 7.4E-77 | – | |
| PANTHER | 1 | 290 | 290 | 7.4E-77 | – | |
| Pfam | 9 | 65 | 57 | 7.2E-32 | ||
| ProSiteProfiles | 11 | 65 | 55 | 27.577 | ||
| ProSitePatterns | 13 | 49 | 37 | - | ||
| MobiDBLite | 55 | 102 | 48 | - | – | |
| MobiDBLite | 66 | 102 | 37 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of LotjaGi3g1v0231700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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