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LotjaGi3g1v0243800.1

Overview

Field Value
Gene ID LotjaGi3g1v0243800
Transcript ID LotjaGi3g1v0243800.1
Lotus japonicus genome version Gifu v1.2
Description O-methyltransferase; TAIR: AT4G35160.1 O-methyltransferase family protein; Swiss-Prot: sp|B6VJS4|ROMT_VITVI Trans-resveratrol di-O-methyltransferase; TrEMBL-Plants: tr|A0A151SVE2|A0A151SVE2_CAJCA Eugenol O-methyltransferase; Found in the gene: LotjaGi3g1v0243800
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:39662930..39664827) extracted from Lotus japonicus Gifu genome v1.2.

CATATTAACAGGGGACCCTGCACGCTTTATAAATGGACACAAGTAAGGTGAGGATTCTACAACAAAATCGAGCAAGTAGC AATATCATTATGGAATTCAATCATGAAGACAATGCTACTAAACTATTTCAAGCTCAATCCCACGTATTCAATCACATTTT CAGTTTCATAAACTCTATGTCTCTTAAGTGTGCAATTGACTTGTGCATACCAGATATCATACATAACTATGTTCAACCCA TGCCACTTTCAAAACTCATTGCTTCTCTACCAATCCACCCCTCTAAAACCAAAAGCATCTTTCGCTTGATGCGAATTTTG ACCAATTCTGGATTCTTTATTCAGCACAATGTCACAGAAAATGAGCTTGAAGTGAGGTATGAGCTAACTGATGCATCTAG ACTACTTATTAAGGACCACCCCTTCAGTATGTCATCTTCACTGCATTGCATACTTGATCCAATTTTAACTGAGCCATGGT ATCAATTTTCTACTTGGTTCAAAAATGAAGATCCTACACCTTTTTACACAAAGAATGGGATGTCATTTTGGGAATATTTT AGCCATAACCCCAAACACAGGCACAGATTCAATGATGCCATGGCTAGTGACACTCGATTGGTTTCAAGTGCAGTCATGGA AAAGTGCAAAGGGGTGTTCAAGGGATTGGAGACACTGGTTGATGTTGGGGGAGGCACTGGGACTTTTGCTAAGGCAATAG CTAAGTCATTCCCACAACTTGAGTGCATTGTATTTGATCTCCCACATGTTGTCTCTGGCTTGCAAGGAAGTGAAAACATT AAATATGTTGGAGGGAACATGTTTGAGGCAATTCCTGCAACTGATTCCATTTTGTTGAAGGTAAAATGTTGTCACATAGT TAGAATATGTTTGATTTACTGCTAAAAAGTATGGAAACTAATGACAAAATAACACATCCTGATGCACTTATTGATGTAAA ACTTGCTATTTGCTTCGACAAAAAGTGTATCACAAATGTGTTATTTTTCAGTTTTCATTCGTTTTAACAATAAACCAAAC ATGCTCTAAAATATATCTTCTAAAGTACCTCTCTGACAGATAAACCATGCTTGAAGGTCTATGCATATTTTATTTCATTT CGACTCTACAAATGAAAAATATGTTATGAAGTTAATGATGATTTAATTAAACATGAAGTGGATACTGTATGAAGTACAGA AAATTAATATTGAATCTACTTTGAATTGCATGAAGTGGATACTGCATGATTGGAATGATGAAGAATGCATGAAAATATTG AAGAACTGCAAGGAGGCAATCTCAAAAAAAGGTAAAAGGGGAAAGGTGATCATCATAGACGTGGTGATTGGGAATGAGAA GGGAGATAGTGAATCAATTGAAACGAAGCTCTTTTACGACTTGGAGATGATGGCATTGCTCGGTGGCAAAGAGAGAGATG AGAAAGAATGGGCCAAGTTAATTTTCTCTGTTGGCTTCAGTAACTACAAGATAACTCCAGTTCTTGGTCTCAGGTCTCTC ATTGAGGTGTATCCATAGTGTTGCCTATTGACAAGTGATAAGAAGCTAGCTGAGTCACATTATGTACAATTGATATAAAT TCCTCTACGAATTTTTTATATTGATATTCTTGTCCAAGTTTTCATTCTATATAAGTTGCATTCTGTTTGATAAGGAAAAA AAAAACATAAGTGGGGATTCAGTGTGCTTGTGTTAGAGATAAATAGGCATAATATCCTACGGGATATTTCTTTATTTATT TATAGACTTATTTTGTAATATGCCTCCGAATATTCTTAGCATATTCTATACTTTCATTATTATAAACAAAATTGTCTACC TCACACACAATTTGTGGTGAGAGTATCCAATCTTACATGGTATCAGGTTTAAGTTGAA
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0243800.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGACACAAGTAAGGTGAGGATTCTACAACAAAATCGAGCAAGTAGCAATATCATTATGGAATTCAATCATGAAGACAA TGCTACTAAACTATTTCAAGCTCAATCCCACGTATTCAATCACATTTTCAGTTTCATAAACTCTATGTCTCTTAAGTGTG CAATTGACTTGTGCATACCAGATATCATACATAACTATGTTCAACCCATGCCACTTTCAAAACTCATTGCTTCTCTACCA ATCCACCCCTCTAAAACCAAAAGCATCTTTCGCTTGATGCGAATTTTGACCAATTCTGGATTCTTTATTCAGCACAATGT CACAGAAAATGAGCTTGAAGTGAGGTATGAGCTAACTGATGCATCTAGACTACTTATTAAGGACCACCCCTTCAGTATGT CATCTTCACTGCATTGCATACTTGATCCAATTTTAACTGAGCCATGGTATCAATTTTCTACTTGGTTCAAAAATGAAGAT CCTACACCTTTTTACACAAAGAATGGGATGTCATTTTGGGAATATTTTAGCCATAACCCCAAACACAGGCACAGATTCAA TGATGCCATGGCTAGTGACACTCGATTGGTTTCAAGTGCAGTCATGGAAAAGTGCAAAGGGGTGTTCAAGGGATTGGAGA CACTGGTTGATGTTGGGGGAGGCACTGGGACTTTTGCTAAGGCAATAGCTAAGTCATTCCCACAACTTGAGTGCATTGTA TTTGATCTCCCACATGTTGTCTCTGGCTTGCAAGGAAGTGAAAACATTAAATATGTTGGAGGGAACATGTTTGAGGCAAT TCCTGCAACTGATTCCATTTTGTTGAAGTGGATACTGCATGATTGGAATGATGAAGAATGCATGAAAATATTGAAGAACT GCAAGGAGGCAATCTCAAAAAAAGGTAAAAGGGGAAAGGTGATCATCATAGACGTGGTGATTGGGAATGAGAAGGGAGAT AGTGAATCAATTGAAACGAAGCTCTTTTACGACTTGGAGATGATGGCATTGCTCGGTGGCAAAGAGAGAGATGAGAAAGA ATGGGCCAAGTTAATTTTCTCTGTTGGCTTCAGTAACTACAAGATAACTCCAGTTCTTGGTCTCAGGTCTCTCATTGAGG TGTATCCATAG
Download CDS Sequence

Protein sequence (LotjaGi3g1v0243800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MDTSKVRILQQNRASSNIIMEFNHEDNATKLFQAQSHVFNHIFSFINSMSLKCAIDLCIPDIIHNYVQPMPLSKLIASLP IHPSKTKSIFRLMRILTNSGFFIQHNVTENELEVRYELTDASRLLIKDHPFSMSSSLHCILDPILTEPWYQFSTWFKNED PTPFYTKNGMSFWEYFSHNPKHRHRFNDAMASDTRLVSSAVMEKCKGVFKGLETLVDVGGGTGTFAKAIAKSFPQLECIV FDLPHVVSGLQGSENIKYVGGNMFEAIPATDSILLKWILHDWNDEECMKILKNCKEAISKKGKRGKVIIIDVVIGNEKGD SESIETKLFYDLEMMALLGGKERDEKEWAKLIFSVGFSNYKITPVLGLRSLIEVYP
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PIRSF
PIRSF005739
16 376 361 2.0E-124
IPR016461
Gene3D
G3DSA:1.10.10.10
20 125 106 6.9E-33
IPR036388
PANTHER
PTHR11746:SF211
21 376 356 1.2E-192 –
PANTHER
PTHR11746
21 376 356 1.2E-192 –
SUPERFAMILY
SSF46785
30 130 101 3.27E-25
IPR036390
ProSiteProfiles
PS51683
39 376 338 83.29
IPR016461
Pfam
PF08100
49 97 49 4.8E-12
IPR012967
Gene3D
G3DSA:3.40.50.150
126 376 251 1.5E-82 –
SUPERFAMILY
SSF53335
130 375 246 2.55E-59
IPR029063
Pfam
PF00891
149 358 210 1.8E-57
IPR001077
CDD
cd02440
214 315 102 0.00375722 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0008171
Molecular function O-methyltransferase activity Catalysis of the transfer of a methyl group to the oxygen atom of an acceptor molecule.
Subterm of
GO:0046983
Molecular function Protein dimerization activity The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0243800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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