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LotjaGi3g1v0244600.1

Overview

Field Value
Gene ID LotjaGi3g1v0244600
Transcript ID LotjaGi3g1v0244600.1
Lotus japonicus genome version Gifu v1.2
Description Acyl-coenzyme A oxidase; TAIR: AT1G06290.1 acyl-CoA oxidase 3; Swiss-Prot: sp|P0CZ23|ACOX3_ARATH Acyl-coenzyme A oxidase 3, peroxisomal; TrEMBL-Plants: tr|G7JUZ2|G7JUZ2_MEDTR Acyl-coenzyme A oxidase; Found in the gene: LotjaGi3g1v0244600
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:39964530..39970713) extracted from Lotus japonicus Gifu genome v1.2.

CTTCTTCATTCGTTATCATTTTCTCAAACTGTTCACATTTCTCTTCCAAAAAAACTCTCACAACTCTCAGAATTCAACCA CCCTTCAACTCTTCTCAGTTCTCACCCTCCGCCATGGACAACCACCACCGCGTTTCCCGGCGAACCGAGATCCTCGCCAA CCACCTCCGCCACAACCCTCCACCAGCCACCGCCATTCTAAACCGCAACAGCTGTCTCAGCTACTCCCCTCCGGAGCTCT CCGACTCGAACCCTATCACCTTCGACGTGACGGAGATGCGGCGGTTGATGGACGGCCACAATCTTGAAGACCGCGACTGG CTGTTCAGTCTGATCATTCAGAGCGGCCTCTTTAACCGCCGTGAGCTCGGCGGGAGGGTGTTCGTTTCCCCTGATTACAA CCAGTCGATGGAGCAGCAGCGTGAGGCGACGATGAAGCGAATCGCGTATCTGTTGGATCGTGGGGTATTCCGTGGGTGGC TCACCGGTGATGGGCCGCAAGAGGAGCTGAGGAAGCTCGCGCTTCATGAGGTTATCGGAATGTATGATCACTCGCTCGCT ATTAAGATTGGTGTTCATGTCTTCTTGTGGTACGTTTTCTCCCTCCCTCATTCTCATGGCTTTTTAATACTAGTGGGTTT TTCGCTATGCCATTGAGCTTGATCAGAAATCATTTTTTATGGGAACAGAGACGCAAATTGATTGAGAAAGTGAGAGATAA GATGTATTTTGATCCCCAATTTATCCATTTCTCTCCTAATGACACTATGTCTTTGATTTGAAATTTGAATCATGGGTTTT ATATCTAACTATCTAAAAAATTTGGAGTTTAGTGGTCAAATCTTATAATTGAGTTTCGAAATTTCTTTGACTATTACACT CAGATCTCATATGGGGTAGAAAATAAGGTAGGTAGAAAAATTATGGTTTATAGAAATGGGGTCTCTTGTGTTTGTAAGAA AAAGGATGGAATTTTGTTTTGTTAAAAAGAGAAAGATACTGACACATTCTTTTTTGTACATAGCATCATGCCTCCTTGTG GAGCCGACTGATTATAAGTTGAGACTTGAAATAAAAATAGGAAATATTCTCTTGAACCAGATAGGCCTAACGTTTATCCC AACTTGAGTAAGTTCTTTTGAACTTGATGCACATATTCAGTATCTTTTACTGAAATTCAATTTTAATTTGGGGGAGTTTT GGTAGGAATGACCCACCTCTTGACAGTTAGTTATAGATGTGTTGGCATAATGTAACTAATTATTAAAAAGCTTAAGCTAA TAGATGAAGGCTTATCGATAATTTTGTATCTAATGAAGCGCACCCTTTTAGAGGATTGTATTCAACCATGGAGAGTTCTG GGGTGGAGTTTAATTCTGTACTTGACAAAGAATTTAGTGGTCTTGTTGCATTACTGAGTCCATGCCTTGTTTTTGTTTGT GTACTGTTATGTGAGTGTGTGTGGCAGGGGGTCCTGAAGGGTGAATCCAGATGTTTGAATTATGCATTTAGATTCTACGG AGGAAGGAAATTTTGTTTTCAAGTTTAAAACATCCCTATAGACATATTCTTTGCCAGACAACTTACATGATCTATAATTT AATGTGATTTTGTTCTCTCTGAAGCTAGTTTGTGGGAGAACTGTAACCAAAGTAAATCAATTCATTACACGAATTTTTTT CTCGTCTTTTTCTTAGTTTTTTCAAGGAAAGACTGTTAAAGTATATCATGTCATAAATTAACTAACTGTCAGTTTCTCTG ATGAATACTGGATTTAGGGGTGGGGCCGTAAAGTTTCTGGGAACCAAGCGCCATCATGACAAGTGGTTGAAAGCTACTGA AAACTATGAGATGAAGGGTTGTTTTGCTATGTCTGAGCTGGGCCATGGAAGTAATGTATGTGTGGGCTGCTCCACATGCG GTTTTTTTTTTTTTTTATTATGCTTTTACCTTATCACTTTCAATAATTCTTTCAAACTAACTGTTTTTCATAGGTCCGAG GAATTGAAACAGTAACTACTTATGATTCAAGTACTGGAGAGTTTATTATCAATACTCCATGTGAATCGGCTCAGAAGTAT TGGATTGGTGGTGCAGCAAATGTAAGGATTTTTTTTGTAAACAACGATAATTATATATCTATGAGAAATATATTGTAAAA CAATTTATGTGTTTTAATCAATTAGTTTAAAATTTTGGGATAAGTAGTTCATAACAGTGTAAAGCTTAGATGTCATTAAG ATTGTTTGGGTGCTTACATTTTTCTCCTGCTATATCTTTGTAGATATTAACATTATATTATTGACATTTTTGTTTTCAGC ATGCAACACACACTATAGTGTTTTCACAACTCTACATCAATGGAAACAATCAAGGGGTGCATGCATTTATTACCCAAATC AGAGATTTAGACGGGAACATATGTCCAAACATCCGAATAGCTGAATGTGGTCACAAAATTGGTTTAAATGGAGTTGACAA TGGCCGTATCTGGTAATATACACATTTTTCATATAAGATAGAACCTGATGAATGAATTTTACTTAAATAAGTCGACGTCT GAATATGTATCTTCAGGTTTGACAATGTTAGAATACCCAGAGAGAATTTGTTAAATTCTGTGGCTGATGTTTCACCAAGT GGCGAGTATTTGAGTGTGATAAAAAATCCAGATCAGGTTAATGATTTTTCAGACAGATGATATTCTCCTTGGTCTTCTTC TGGTCTTAGTTATTCCCAATTGATAGCTTGCTAACATATACTTTGTTATGTGTCATTCTTGCTCCAGAGATTTGGAGCAT TCTTAGCACCTTTGACCTCTGGTCGTGTAACTATTTCCGTCAGTGCTGTTTACATGTCCAAGGTAATGTGCAATTTTTTT TGTGGATGTGATCCCTTTGTATGTATTCTTTTATTTTTTTTATTGAATTTATCAAACTCATAACAAACTCTAACATCTTA TACTATCATGCCATAAATTTGCTGTTGGTAGGTTAGCTTAGCCATTGCTATAAGGTATGCATTGACAAGGCAGGCATTTT CTATTACACCAAATGGGCCAGAAGTTTTACTGCTTGATTACCCAAGTCATCAGAGGCGTCTATTACCTTTACTGGCAAAA GTGTAAGTTCTCTAAGCTTAAGCATTTCAATATCTATTAGCTGTGACCTCCAATTGATTCAAGTCTTTTAGGAACCCGGT ACTTTAAGTATACCAATTTAGTATATATCCCGGATAATTTAAGACACCAAGTTTATTTCCCACCAAAATGTTAAGAATAT TTAAAATAAATACTTGATATTGTGGGATTAATTATTTTTTAGACACACTCAGAAGATATTTTCCTATCTCTAATAAATTT GATTTAGAAGCAATTTTCAGCATGCACTCATGAGAGCTGTGACATAAAAACCTGATTTGTGGCTTATTTATATTGTTATT TATGAATAAATGTTTAGAGATTAATTAGAAATGACTATCCACGTTTGGCCTTTGGCAGCTATAACAATGGACCTGTTCAT GTTCATTTCCTTACTTTTTTTAACAGATATGCCATGAGTCTTGCTGCATTTGAGCTCAAAATGATGTATGTGAAAAGAAC GCCTGAGTCAAACAAAGAAATTCATATTGTTTCCAGTGCATACAAGGCTACTTTTACATGGAATAATATGCGTACACTTC AGGTAAGTATTCCTATTATACTTGGGTTTAATAATTATATGTTATTGGCCTCATTAAGATTCTTTTAATGTATGAATTAG GAATGTCGTGAAGCCTGTGGAGGACAAGGCATTAAAACTGAAAATCGTATTGGTCAATTCAAGGGTGAATTTGATGTGCA GTCAACATTTGAGGGGGACAACAATGTTCTGATGCAGCAGGTAGGATGGAGCAATCTGTTAAATATGAAATTTGAATGAC TAAGCACAACATGTTTTAAATTCAAACCAATGAGAAATATGTTCTGTTGACTACAATGCAATAATTAAATCCTAGCTTGT TGTTTAGATTATTTGCATTTGAAATTTAAATGGTAGTGAAAATATAGTAATAGTCCTCTCGAATCCTACTCTCAGGATAC CAAATTTTGGCCTTCTTCTAACTATGTTAACTGTTTGGTTGATTACTTTCTAGATATAAATTAATTGAGATTTTAGGCCT ATGCTTTGTCACATTTAGACTGCGAAGGAATTTTCCATGAATGATTTTGTTAGAGACAGAAATCTATTGTTTTGCCTTAA AGATATTTGATGAAATATTGCCTATTAAGTATCAAAAAAAAAAAGAAAAAACTGCAGTGAATATGTTTTTATTTATATAG TTAACCACAGGACTGTAGAAGTGACCATTTCCCATTTATGATATGGGTGAAATTTGTCAATTTACTTTTAGCTTATGATT TTTGACTTAGCCACTTAAAGTGGCAATAAATAATTCATGTCAAGTTTAAGCATCACTCAGCTCATTTTCGTTCAATATGG ATTGATTGAATTCATGGATTCTATATTTCATCTCAGATCAGCAAGGCACTCCTTGCAGAATACATAGCATGTCAGATGAA AAACAAGCCATTTAGTGGTCTGGGATTAGAACACATGAACAAACCTTGTCCTGTTATCCCATCTCAGTTAACAAGTTCTA ACCTTAGGAGCAGTGACTTTCAGGTGATCCTTTTATTATCCTTGTTGATATTTGGAATAGCTGGTTAGAAGCTTCTACTT TTATTCTTACCTCTCATTGTCACAGATTGATCTGTTCCACCTAAGAGAGCGGGATCTATTGAAACGTTTTGCTGCAGAGG TTTCAGAACATCAATCTCGTGGAGAAAGCAAAGAGTCTGCCTTCATTCTAGTGAGGATTGTACCAGGTTTTGTTAATTAT TCCTTTCTTCTTTTCAGTGTCTTACTGTTTGAAACTCTTTTCTCGATCAGAGTTATCAGCTTGCAGAGGACTTGGGCAGA GCTTTCTCTGAACGAGCAATACTGAAAACGTTCGTGGAGACTGAGTCAGCTTTGCCAGCTGGTTCATTGAAGGTAAATAA TATTATTGCTCGTTAAATATTCCGGTGCATAGTGTTTTTTGTTAAATTATTTCTAAGGCTGAAACAGAATTTACTGATTT CTGTGTTTGCCTCCTTGTAGAATGTCTTAGGTCTGTTGAGATCATTGTATGCCTTGATTTGTGTGGATGAAGATGCCGCC TTTCTTCGATATGGTTACTTGTCCACACAGAATGCTGCTGCCGTGAGGAAAGAAGTGCCGAAACTTTGTGCTGAACTTCG ACCCCATGCACTTGCCTTGGTTAGTTCATTTGGTATTCCTGATGCATTTTTGAGCCCTATCGCATATGACTGGGTTGATT CAAATTCATGGGGTTCTACTCAAAATTACTAGCTGATGCAAATTTCTCCACGTAATTGAGGGGTAGGATGCGATATGACG GTATTCTTAGTTCCGTTTTATTGTTTAATTCTCCATATCTGCATGGAAATTGGAAAACTGTTTTAGTTACGAATAATGAG TGGTTCACACGTGTTGTAAATGTGATAGCGATAAAAAAAGGGAAGAGATAGATGATGAGACATCTAATGGGAAAGGTAGA AAAATTGAATAAGTTATGAAACAGGTTTAAATAAAGTGATGTGAAAAAATATCACTTATGGTTGTATACTTGAATAATAC TTCAAATTTATCGATACCTTTTCCTCTATATTTTTTACTTTACAAGCTCTACCACATCACGTTAATCTGAACTAGGATTC TGAACTAAGGATTCGCAAGATTTTAATGAGTAAATGTTAGTGTGTTTGAATTTCAGTTTCAAAATAGAGTTTGAGTGAAT GTGGATTTATATTACATAATTTGAGTTAATGTGAGTTGGGTGTGATGTGATTTATGTTTAGACGCTTTTTTATCTACCCA ACTGAAAAGTAAGTGTTGAGTTCAATTGAGTGAATGCGGGTTTTAGGGTCAAAGTAGGTTAGGGTGAATTATGAATGTGA GTATCCAAATATGATAACACATTGTTCGGTGCAGAGTGCGGACCAAAAGTATATTGAGGATGCAAACTGAAAAACAAACC GAGTCTTGTTCTAGTTTCATAATGGGAGTTCCTTTTCTTACCATTCCGCATTTATTCTAACCACCCTCTTCAAACTAGTT TTTGACATGTAATTATGTGTTAGA
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0244600.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGACAACCACCACCGCGTTTCCCGGCGAACCGAGATCCTCGCCAACCACCTCCGCCACAACCCTCCACCAGCCACCGC CATTCTAAACCGCAACAGCTGTCTCAGCTACTCCCCTCCGGAGCTCTCCGACTCGAACCCTATCACCTTCGACGTGACGG AGATGCGGCGGTTGATGGACGGCCACAATCTTGAAGACCGCGACTGGCTGTTCAGTCTGATCATTCAGAGCGGCCTCTTT AACCGCCGTGAGCTCGGCGGGAGGGTGTTCGTTTCCCCTGATTACAACCAGTCGATGGAGCAGCAGCGTGAGGCGACGAT GAAGCGAATCGCGTATCTGTTGGATCGTGGGGTATTCCGTGGGTGGCTCACCGGTGATGGGCCGCAAGAGGAGCTGAGGA AGCTCGCGCTTCATGAGGTTATCGGAATGTATGATCACTCGCTCGCTATTAAGATTGGTGTTCATGTCTTCTTGTGGGGT GGGGCCGTAAAGTTTCTGGGAACCAAGCGCCATCATGACAAGTGGTTGAAAGCTACTGAAAACTATGAGATGAAGGGTTG TTTTGCTATGTCTGAGCTGGGCCATGGAAGTAATGTCCGAGGAATTGAAACAGTAACTACTTATGATTCAAGTACTGGAG AGTTTATTATCAATACTCCATGTGAATCGGCTCAGAAGTATTGGATTGGTGGTGCAGCAAATCATGCAACACACACTATA GTGTTTTCACAACTCTACATCAATGGAAACAATCAAGGGGTGCATGCATTTATTACCCAAATCAGAGATTTAGACGGGAA CATATGTCCAAACATCCGAATAGCTGAATGTGGTCACAAAATTGGTTTAAATGGAGTTGACAATGGCCGTATCTGGTTTG ACAATGTTAGAATACCCAGAGAGAATTTGTTAAATTCTGTGGCTGATGTTTCACCAAGTGGCGAGTATTTGAGTGTGATA AAAAATCCAGATCAGAGATTTGGAGCATTCTTAGCACCTTTGACCTCTGGTCGTGTAACTATTTCCGTCAGTGCTGTTTA CATGTCCAAGGTTAGCTTAGCCATTGCTATAAGGTATGCATTGACAAGGCAGGCATTTTCTATTACACCAAATGGGCCAG AAGTTTTACTGCTTGATTACCCAAGTCATCAGAGGCGTCTATTACCTTTACTGGCAAAAGTATATGCCATGAGTCTTGCT GCATTTGAGCTCAAAATGATGTATGTGAAAAGAACGCCTGAGTCAAACAAAGAAATTCATATTGTTTCCAGTGCATACAA GGCTACTTTTACATGGAATAATATGCGTACACTTCAGGAATGTCGTGAAGCCTGTGGAGGACAAGGCATTAAAACTGAAA ATCGTATTGGTCAATTCAAGGGTGAATTTGATGTGCAGTCAACATTTGAGGGGGACAACAATGTTCTGATGCAGCAGATC AGCAAGGCACTCCTTGCAGAATACATAGCATGTCAGATGAAAAACAAGCCATTTAGTGGTCTGGGATTAGAACACATGAA CAAACCTTGTCCTGTTATCCCATCTCAGTTAACAAGTTCTAACCTTAGGAGCAGTGACTTTCAGATTGATCTGTTCCACC TAAGAGAGCGGGATCTATTGAAACGTTTTGCTGCAGAGGTTTCAGAACATCAATCTCGTGGAGAAAGCAAAGAGTCTGCC TTCATTCTAAGTTATCAGCTTGCAGAGGACTTGGGCAGAGCTTTCTCTGAACGAGCAATACTGAAAACGTTCGTGGAGAC TGAGTCAGCTTTGCCAGCTGGTTCATTGAAGAATGTCTTAGGTCTGTTGAGATCATTGTATGCCTTGATTTGTGTGGATG AAGATGCCGCCTTTCTTCGATATGGTTACTTGTCCACACAGAATGCTGCTGCCGTGAGGAAAGAAGTGCCGAAACTTTGT GCTGAACTTCGACCCCATGCACTTGCCTTGGTTAGTTCATTTGGTATTCCTGATGCATTTTTGAGCCCTATCGCATATGA CTGGGTTGATTCAAATTCATGGGGTTCTACTCAAAATTACTAG
Download CDS Sequence

Protein sequence (LotjaGi3g1v0244600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MDNHHRVSRRTEILANHLRHNPPPATAILNRNSCLSYSPPELSDSNPITFDVTEMRRLMDGHNLEDRDWLFSLIIQSGLF NRRELGGRVFVSPDYNQSMEQQREATMKRIAYLLDRGVFRGWLTGDGPQEELRKLALHEVIGMYDHSLAIKIGVHVFLWG GAVKFLGTKRHHDKWLKATENYEMKGCFAMSELGHGSNVRGIETVTTYDSSTGEFIINTPCESAQKYWIGGAANHATHTI VFSQLYINGNNQGVHAFITQIRDLDGNICPNIRIAECGHKIGLNGVDNGRIWFDNVRIPRENLLNSVADVSPSGEYLSVI KNPDQRFGAFLAPLTSGRVTISVSAVYMSKVSLAIAIRYALTRQAFSITPNGPEVLLLDYPSHQRRLLPLLAKVYAMSLA AFELKMMYVKRTPESNKEIHIVSSAYKATFTWNNMRTLQECREACGGQGIKTENRIGQFKGEFDVQSTFEGDNNVLMQQI SKALLAEYIACQMKNKPFSGLGLEHMNKPCPVIPSQLTSSNLRSSDFQIDLFHLRERDLLKRFAAEVSEHQSRGESKESA FILSYQLAEDLGRAFSERAILKTFVETESALPAGSLKNVLGLLRSLYALICVDEDAAFLRYGYLSTQNAAAVRKEVPKLC AELRPHALALVSSFGIPDAFLSPIAYDWVDSNSWGSTQNY
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10909:SF379
8 676 669 0.0 –
PANTHER
PTHR10909
8 676 669 0.0 –
PIRSF
PIRSF000168
38 679 642 2.0E-183
IPR012258
SUPERFAMILY
SSF56645
101 307 207 1.83E-47
IPR009100
Gene3D
G3DSA:2.40.110.10
186 317 132 1.0E-50 –
Pfam
PF02770
187 296 110 4.6E-13
IPR006091
SUPERFAMILY
SSF47203
326 494 169 8.7E-48
IPR036250
Pfam
PF00441
330 485 156 7.5E-11
IPR009075
Gene3D
G3DSA:1.20.140.10
331 493 163 1.2E-50 –
SUPERFAMILY
SSF47203
522 665 144 3.14E-28
IPR036250
Gene3D
G3DSA:1.20.140.10
527 655 129 1.4E-17 –
Pfam
PF01756
528 661 134 3.8E-21
IPR002655

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003997
Molecular function Acyl-CoA oxidase activity Catalysis of the reaction: acyl-CoA + O2 = trans-2,3-dehydroacyl-CoA + hydrogen peroxide.
Subterm of
GO:0005777
Cellular component Peroxisome A small organelle enclosed by a single membrane, and found in most eukaryotic cells. Contains peroxidases and other enzymes involved in a variety of metabolic processes including free radical detoxification, lipid catabolism and biosynthesis, and hydrogen peroxide metabolism.
Subterm of
GO:0006631
Biological process Fatty acid metabolic process The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis.
Subterm of
GO:0006635
Biological process Fatty acid beta-oxidation A fatty acid oxidation process that results in the complete oxidation of a long-chain fatty acid. Fatty acid beta-oxidation begins with the addition of coenzyme A to a fatty acid, and occurs by successive cycles of reactions during each of which the fatty acid is shortened by a two-carbon fragment removed as acetyl coenzyme A; the cycle continues until only two or three carbons remain (as acetyl-CoA or propionyl-CoA respectively).
Subterm of
GO:0016627
Molecular function Oxidoreductase activity, acting on the CH-CH group of donors Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.
Subterm of
GO:0055114
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
Subterm of
GO:0071949
Molecular function FAD binding Interacting selectively and non-covalently with the oxidized form, FAD, of flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0244600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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