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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0253100 |
| Transcript ID | LotjaGi3g1v0253100.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Trehalose-6-phosphate synthase, putative; TAIR: AT1G06410.1 trehalose-phosphatase/synthase 7; Swiss-Prot: sp|Q9LMI0|TPS7_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP]-forming] 7; TrEMBL-Plants: tr|I1LSH8|I1LSH8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0253100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:42676772..42682299) extracted from Lotus japonicus Gifu genome v1.2.
ACGCGAGATATTATATTATTTACGACGTGAATCCTCGTTTTTATATTTCAATAATAAGGGTTTCCTAATTGCTAATTCAT TCTGCGAGAGGAGAAGGAGAATGATAAGAAGCGAAGAGAGAAGAAAGAAAAGAGAGAAGAGATCTTGTAAATAACGAAAC CCTAGTTTTCATTCCCCTTTTTTTTGCGAATTTTCACATTAATTCAGTTGCAAACTGCTACTGTTACCTCTGAGGAATCT CTTGTCATTGCTTCAATCGCACAAGGTTCGGTTTCAATTCACCGTTTTCTCTCGATTTTGATGTGCGGTTTTTCTGTATT GGGTTGAAGAAGGGGAAACTGATAAAAAAAACTTCTTTTTTTGTTTATTTGAATTTGTTTTGGTAATCGAGTTTTATTTG AATCGATCTTATTGTATCGGGAGTATGATTTTTTTTCTTCCGATTTTTGTTTTGTTGTAAAGGGTGTTTGTTCCGATGCT CATTGTGATGTAACCCTTTTGGGGGTCAAGAATTTTGGGGCTTTTGCATAGTGTGTAAGGTTGGAATATGTCTTACGGAA TTGCTGGGTGTGTGAGTGTGATGTGTCTTTATTTTGGTAAACTGGTCATTGTTTGCAACCAGAAAAGTATTTAGCATAGA CTAGTGTGCTTCATTATCACTTAATGAATGTTGTTCTCATATGTTAATGTTTGAGAATGTGTGTTTGTGCTTGGGGGCTG TTTTTAGTATGTGAATTGTGAGTTTGGTTGTGTTTGTTTCTTTAATCATGGATGTGTTTTGCTTGTTGTCAATTTTACAG ATTAAACGAGTTTTGTCGGGTTGTGAATTTTTAGAAGGACGCCAAGATGATGTCAAGATCGTATACAAACCTTTTAGATT TGGCTTCTGGGAATTTCCCGGCCATGGGGCGGGAGTCAAAGGAAAGAAGGCGGATGCCGAGGGTTATGAGTGTCCCTGGG ATAGTCTCAGAGCTGGATGATGATCAGGCTGTTAGTGTTTCTTCTGATAATCCGTCAACTATTTCTTCTGATCGAATGAT CATTGTAGCAAACCAGCTGCCTCTGAAAGCAAAGCGGAAAGAGGACAACAAAGGGTGGAGTTTCAGTTGGAATGAGGATT CCTTGCTTTTACAGCTTAAGGATGGTTTACCAGAAGATATGGAGATCCTTTATGTTGGGTCTTTACGTGTTGACATTGAT CCAGCTGAACAGGATGACGTTTCACAGTATTTGTTGGACAAGTTCAAATGTGTCCCTACTTTTCTACCCCCTGATGTGTT GGATAAATTCTATGATGGCTTCTGTAAGAGGCAGTTATGGCCACTTTTCCATTACATGTTACCATTTTCTACAGATAAAA GCCATCGTTTTGATCGTACTTTGTGGGAAGCCTATGTTCTGGCAAATAAGCTTTTTTTTCAAAAGGTAGTTGAAATAATC AATCCAGAAGATGATTATATTTGGATTCATGATTATCACTTGATGGTGCTGCCGACTTTTATTAGAAGGCGTTTTAACCG GGCTAAGATTGGATTTTTCCTACATAGCCCCTTTCCTTCATCAGAGATATATAGGACTCTTCCTGTCAGGGAAGAGATAC TGAAAGCTTTACTGAACTCTGATATCATTGGATTCCATACCTTTGACTATGCTCGCCATTTCCTTTCCTGTTGCAGTCGT ATGTTGGGTTTGGAGTATCAGTCAAAGAGGGGTTATCTAGGATTGGAATATTATGGAAGGACTATCAGTATTAAGATTAT GCCTGTCGGGATTCACATGGGTCGGATTGAATCAGTTATGAGAATGGCAGATGAGGAGTGTAAGGTAAGGGAGCTTAGAC ATAAATTCGCAGGAAAAACCATCTTGCTTGGTGTTGACGATATGGACATTTTTAAAGGCATAAATTTGAAGATTTTGGCT ATGGAGCAGATGCTCAGACAACACCCCAAATGGCAGGGAAGAGCTGTTCTGGTCCAGATAGTTAATCCTCCAAGGGGTAG AGGGATACACCTAGAGGAGATACACACTGAAATACAAGAAAGCTGCAGCAGGATCAACAGAGTGTTTGGGCGACCTGGTT ATGAACCTATTGTTTTTATTGATAGGTCGGTTCCAATTGCTGAAAAAGTTGCCTACTACAGCATTGCTGAGTGTGTTATT GTCACAGCAGTAAGGGATGGGATGAACCTAACTCCTTATGAATATATTGCTTGTAGACAGGGATTATCTAGTTCTGAATC AAGTTCCAATGTCTACGACGCAAAGAAGAGCATGCTGGTAATATCAGAATTTATTGGGTGTTCTCCGTCACTTAGTGGGG CTATCCGTGTCAATCCATGGAATGTTGAAGCAACTTCCGAGGCAATGAATGAGGCCATCTCAATGGGTGATGCAGAAAAA CAGTTACGGCATGAAAAACATTACCGATATGTAAGCACTCATGATGTGGCATACTGGTCACGTAGTTTCTTGCAAGACAT GGAGAGGGCTTGCACAGACCTTCTTAAGAAAAGATGTTGGGGAATAGGTCTTAGTTTTGGATTTAGAGTTGTGGCACTTG ACCCTAATTTTAAAAAGCTCTCAATTGATTCTATGGTTTCAGCTTACAAGAGAGCAACAAGCAGGGCCATTTTGTTGGAC TATGATGGTACTGTGATGCCACAGAACTCCATTAATAAGAGTCCAAGCACGGAAGTCATCTCTATTTTAGAATCACTTTG TGCAGACCCCAAAAATGTAGTTTTCATTGTTAGTGGACGGGGAAGGGATAGCTTAAGCGACTGGTTTATCCCCTGCAAAA AACTTGGAATTGCTGCAGAACATGGGTACTTCTTGAGGTGTGATCTCTCTCTGACATGTCATCTATTTTCTTATGCTTAA TATTGATGTTCAGAATCACATTTTGCACGTGTCGTATGAAAATTAAACATCTTTTAGGCACCTTCATACAATGATCTTAT GCTAGAGTTGGAAAGTGCCATTTCATTTTGTCTGGATGCACCAAATTAGAATAATTTCCTTCTGCTAAACAAACCCATAA GATGGGGGTCAAATGGCTTTTCAAGTCAAATTTGATAGTGTATGATATAATGTGATTTGAAATCCAATTATATATGGTTA TGCAAATGCTGTTAGTAACTCATCCTACTCTGTAGTTTAAACCTGTGTTGAGGGAAGAAGTTCCATATAAGTGGTACTCT ATTGCTGAAAATGTTTTTCACTACCTCCTCTATGTGTGGAATATAGATCTGCTTATTAATCAAATCTAGAAGTATATTTG CACTTTGCGAACATATAATTTGTCGAATGTTTTCTCTCTTGTTCTATTGTCCTTAAATTTTGTCTTGTGTTCTCTGCTTT TACATAGCAATTCGTTTTAAAGGTTTGAGCATTTTTCAGATGGTCCGAGAGTGAAGAATGGGAAATTTTAGGTAAGTGCA CTGAATTTGGATGGATGCAGATTGCGCAACCTGTAATGAAACTATATACAGAGGCAACCGATGGTTCCAGCATTGAACGG AAGGAAAGTGCTTTGGTCTGGCAATACCGGGATGCAGACCTTGGTTTTGGATCTGCTCAGGCTAAGGAAATGTTAGATCA TCTAGAAAGTGTTTTGGCCAATGAGCCTGTTGCTGTGAAGAGTGGCCAGTTTATTGTTGAAGTGAAGCCTCAGGTATGCA TAATCTTCTAAACGATTTCTCTGTGAAGCGAATTTTACAATTGATAAATATGAAAATCTCCTTTCAAAAAATGCTTTCCT GGGTATGAATTTCTTGTATACGTCATACTGTGGGAGAATTTAGTTTCTTTCAATTTTCATTTGCTACATTTTATCTGACC CTTCTGCTTTCTGGTTTTATTTCTGATGGTATGCTGACCCATATACAATATTAAGTTGGCTTCTGAAGTTTAGAAATCAT CAACCTTTAAGATTATTTCTTATAAGCAGAGGGCTTGGGTGAGGTGCAGAGAACTGATTAATGCTTCATTTGCAAATTTA TTGTTGGAACATGATCTTTTGTGTACAAAATTGGTGTAAATAGCGGTTCGAAATGTTATGATGTCGAACTAGGGTAAGAT GAGACTTTTTGTTACCAAAAAGCAAATAGCAAAAAGATATGGAGGAACTTAGAACGGTTAACTAATGTGTTCTTAGTCTA TTTGGTTACCCCCCAAGCATATATATAACAAGAGAAATTTCCATCCACTGGATACAAAAACCTGACCTATTTCATCCTCG TATGAGATATCTAACATTCTTAACATGGCATTAGAACTTCTCTTACATTCGGGTTCGACAAGCTTCCTTACTTTGTATAT GCTGTTGAAGGAGTTGTTTTGAAGCAACTTGGTGGTTACAATTTTCAACTTGGTGGTTATCATATAATTTTGGCATGAAC TTATATAATTGATGTGCTAGATAATTATGCTGCATCTTTATGGAAAAGGACTGATTCATTATATGTCATTTGCTTTGCAG GATGTGAGCAAAGGCTTAGTTGCTGAAAAGATATTCTCATCAATGGCTGGGAATGGCAAACCAGCTGACTTTGTGCTTTG TGTTGGTGATGACAGATCAGATGAGGACATGTTTGAAATAGTTAGGAGTGCAATCTCAAGAAATATTCTTTCCCCCAATG CTTCTGTATTTGCTTGCACGGTTGGACAAAAACCAAGCAAAGCAAAGTATTATCTGGATGATACCTTTGAAGTAATAAAC ATGCTAGAATCTTTGGCGGAAGAATCAGATTCTTCTCCTTACATAGAAGAAACTGGGGATTCCTCTTGAAGGCAAGTGTG ACTAAGGTTTCTCCTGACTTAGATGGTATTTTTTTATTTATTGCAATGTAATATTCTTTGTGACTTTGGGGCGTTTGCAG AGTATATTTCATAAAGTTTTCCTTGTTTTTTCTTATTCCTTTCCTCAATTATATATAACACATAAGTTTGGGAAAATCCC GTCTTTATTTTCTTTCCTGGTCATTGATAATTCTACTTTTAGTTCTGGAGGGGCAGAGGGATGTTAAATTTGCTTTTATA TCCTTTTAATAAAGGAAGAAAAAAGAGAGCTTTTACTTTGCATCGGGCCATTGACAACCTTTCTGAAGAACAAAAAAAAT GCACAATCTTTCTTGTTCCTCTCTTTATCTCAACCTATCCAATCCCCTCTCTCGGTTCCACATTAGTTGTGTTCTATTTC TTCTGTCCACCCAAATTATAAATTCTAGTTAGCTTCCCCTTTAGTTGTGTTCCTTCATGCTTAAAGAAAAGGTTCCTTTG CTATCAACTTCTATCATGAACCCTGTCACTCGTACCAGGGTTGAAAGTTGAAACACTGCAAGACTCAGATGTAACAGTTT GGGAGATTATTTACCTGGAGATAGAAGGTGATGCAACGAAACAGTTAGCTGGACAAACTCTCGCCGGAAAAACTCATGCA AAAACTCATGCAACAAGTTAATTAACAAAATGCAGTAAAATCCATCATTGTCAATGGATGGGGAGGATCGTCTATTACAG ATTTAGGC
CDS sequence (LotjaGi3g1v0253100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGTCAAGATCGTATACAAACCTTTTAGATTTGGCTTCTGGGAATTTCCCGGCCATGGGGCGGGAGTCAAAGGAAAG AAGGCGGATGCCGAGGGTTATGAGTGTCCCTGGGATAGTCTCAGAGCTGGATGATGATCAGGCTGTTAGTGTTTCTTCTG ATAATCCGTCAACTATTTCTTCTGATCGAATGATCATTGTAGCAAACCAGCTGCCTCTGAAAGCAAAGCGGAAAGAGGAC AACAAAGGGTGGAGTTTCAGTTGGAATGAGGATTCCTTGCTTTTACAGCTTAAGGATGGTTTACCAGAAGATATGGAGAT CCTTTATGTTGGGTCTTTACGTGTTGACATTGATCCAGCTGAACAGGATGACGTTTCACAGTATTTGTTGGACAAGTTCA AATGTGTCCCTACTTTTCTACCCCCTGATGTGTTGGATAAATTCTATGATGGCTTCTGTAAGAGGCAGTTATGGCCACTT TTCCATTACATGTTACCATTTTCTACAGATAAAAGCCATCGTTTTGATCGTACTTTGTGGGAAGCCTATGTTCTGGCAAA TAAGCTTTTTTTTCAAAAGGTAGTTGAAATAATCAATCCAGAAGATGATTATATTTGGATTCATGATTATCACTTGATGG TGCTGCCGACTTTTATTAGAAGGCGTTTTAACCGGGCTAAGATTGGATTTTTCCTACATAGCCCCTTTCCTTCATCAGAG ATATATAGGACTCTTCCTGTCAGGGAAGAGATACTGAAAGCTTTACTGAACTCTGATATCATTGGATTCCATACCTTTGA CTATGCTCGCCATTTCCTTTCCTGTTGCAGTCGTATGTTGGGTTTGGAGTATCAGTCAAAGAGGGGTTATCTAGGATTGG AATATTATGGAAGGACTATCAGTATTAAGATTATGCCTGTCGGGATTCACATGGGTCGGATTGAATCAGTTATGAGAATG GCAGATGAGGAGTGTAAGGTAAGGGAGCTTAGACATAAATTCGCAGGAAAAACCATCTTGCTTGGTGTTGACGATATGGA CATTTTTAAAGGCATAAATTTGAAGATTTTGGCTATGGAGCAGATGCTCAGACAACACCCCAAATGGCAGGGAAGAGCTG TTCTGGTCCAGATAGTTAATCCTCCAAGGGGTAGAGGGATACACCTAGAGGAGATACACACTGAAATACAAGAAAGCTGC AGCAGGATCAACAGAGTGTTTGGGCGACCTGGTTATGAACCTATTGTTTTTATTGATAGGTCGGTTCCAATTGCTGAAAA AGTTGCCTACTACAGCATTGCTGAGTGTGTTATTGTCACAGCAGTAAGGGATGGGATGAACCTAACTCCTTATGAATATA TTGCTTGTAGACAGGGATTATCTAGTTCTGAATCAAGTTCCAATGTCTACGACGCAAAGAAGAGCATGCTGGTAATATCA GAATTTATTGGGTGTTCTCCGTCACTTAGTGGGGCTATCCGTGTCAATCCATGGAATGTTGAAGCAACTTCCGAGGCAAT GAATGAGGCCATCTCAATGGGTGATGCAGAAAAACAGTTACGGCATGAAAAACATTACCGATATGTAAGCACTCATGATG TGGCATACTGGTCACGTAGTTTCTTGCAAGACATGGAGAGGGCTTGCACAGACCTTCTTAAGAAAAGATGTTGGGGAATA GGTCTTAGTTTTGGATTTAGAGTTGTGGCACTTGACCCTAATTTTAAAAAGCTCTCAATTGATTCTATGGTTTCAGCTTA CAAGAGAGCAACAAGCAGGGCCATTTTGTTGGACTATGATGGTACTGTGATGCCACAGAACTCCATTAATAAGAGTCCAA GCACGGAAGTCATCTCTATTTTAGAATCACTTTGTGCAGACCCCAAAAATGTAGTTTTCATTGTTAGTGGACGGGGAAGG GATAGCTTAAGCGACTGGTTTATCCCCTGCAAAAAACTTGGAATTGCTGCAGAACATGGGTACTTCTTGAGATGGTCCGA GAGTGAAGAATGGGAAATTTTAGGTAAGTGCACTGAATTTGGATGGATGCAGATTGCGCAACCTGTAATGAAACTATATA CAGAGGCAACCGATGGTTCCAGCATTGAACGGAAGGAAAGTGCTTTGGTCTGGCAATACCGGGATGCAGACCTTGGTTTT GGATCTGCTCAGGCTAAGGAAATGTTAGATCATCTAGAAAGTGTTTTGGCCAATGAGCCTGTTGCTGTGAAGAGTGGCCA GTTTATTGTTGAAGTGAAGCCTCAGGATGTGAGCAAAGGCTTAGTTGCTGAAAAGATATTCTCATCAATGGCTGGGAATG GCAAACCAGCTGACTTTGTGCTTTGTGTTGGTGATGACAGATCAGATGAGGACATGTTTGAAATAGTTAGGAGTGCAATC TCAAGAAATATTCTTTCCCCCAATGCTTCTGTATTTGCTTGCACGGTTGGACAAAAACCAAGCAAAGCAAAGTATTATCT GGATGATACCTTTGAAGTAATAAACATGCTAGAATCTTTGGCGGAAGAATCAGATTCTTCTCCTTACATAGAAGAAACTG GGGATTCCTCTTGA
Protein sequence (LotjaGi3g1v0253100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMSRSYTNLLDLASGNFPAMGRESKERRRMPRVMSVPGIVSELDDDQAVSVSSDNPSTISSDRMIIVANQLPLKAKRKED NKGWSFSWNEDSLLLQLKDGLPEDMEILYVGSLRVDIDPAEQDDVSQYLLDKFKCVPTFLPPDVLDKFYDGFCKRQLWPL FHYMLPFSTDKSHRFDRTLWEAYVLANKLFFQKVVEIINPEDDYIWIHDYHLMVLPTFIRRRFNRAKIGFFLHSPFPSSE IYRTLPVREEILKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTISIKIMPVGIHMGRIESVMRM ADEECKVRELRHKFAGKTILLGVDDMDIFKGINLKILAMEQMLRQHPKWQGRAVLVQIVNPPRGRGIHLEEIHTEIQESC SRINRVFGRPGYEPIVFIDRSVPIAEKVAYYSIAECVIVTAVRDGMNLTPYEYIACRQGLSSSESSSNVYDAKKSMLVIS EFIGCSPSLSGAIRVNPWNVEATSEAMNEAISMGDAEKQLRHEKHYRYVSTHDVAYWSRSFLQDMERACTDLLKKRCWGI GLSFGFRVVALDPNFKKLSIDSMVSAYKRATSRAILLDYDGTVMPQNSINKSPSTEVISILESLCADPKNVVFIVSGRGR DSLSDWFIPCKKLGIAAEHGYFLRWSESEEWEILGKCTEFGWMQIAQPVMKLYTEATDGSSIERKESALVWQYRDADLGF GSAQAKEMLDHLESVLANEPVAVKSGQFIVEVKPQDVSKGLVAEKIFSSMAGNGKPADFVLCVGDDRSDEDMFEIVRSAI SRNILSPNASVFACTVGQKPSKAKYYLDDTFEVINMLESLAEESDSSPYIEETGDSS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 855 | 855 | 0.0 | – | |
| PANTHER | 1 | 855 | 855 | 0.0 | – | |
| Gene3D | 55 | 321 | 267 | 1.3E-75 | – | |
| Pfam | 63 | 546 | 484 | 4.7E-179 | ||
| CDD | 63 | 546 | 484 | 0.0 | – | |
| SUPERFAMILY | 63 | 550 | 488 | 1.95E-149 | – | |
| Gene3D | 322 | 531 | 210 | 1.1E-74 | – | |
| TIGRFAM | 592 | 841 | 250 | 1.5E-35 | ||
| Gene3D | 592 | 687 | 96 | 1.5E-12 | ||
| SUPERFAMILY | 593 | 841 | 249 | 2.82E-45 | ||
| CDD | 594 | 835 | 242 | 6.01184E-67 | – | |
| TIGRFAM | 595 | 800 | 206 | 5.3E-17 | ||
| Pfam | 596 | 829 | 234 | 2.9E-72 | ||
| Gene3D | 721 | 850 | 130 | 2.4E-19 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Biological process | Trehalose biosynthetic process | The chemical reactions and pathways resulting in the formation of trehalose, a disaccharide isomeric with sucrose and obtained from certain lichens and fungi. |
Expression pattern of LotjaGi3g1v0253100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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